RNA–Protein interactions for RNA: ENST00000414054.5

LINC00486-201, long intergenic non-protein coding RNA 486, humanhuman

TSL 4 BASIC

Gene LINC00486, Length 1,794 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00486-201ENST00000414054 NISCHQ9Y2I1 1504 aa19.53■□□□□ 0.72
LINC00486-201ENST00000414054 CCDC180Q9P1Z9 1646 aa17.43■□□□□ 0.38
LINC00486-201ENST00000414054 ABCC9O60706 1549 aa17.19■□□□□ 0.34
LINC00486-201ENST00000414054 RB1CC1Q8TDY2 1594 aa16.46■□□□□ 0.22
LINC00486-201ENST00000414054 CHIC1Q5VXU3 224 aa16.42■□□□□ 0.22
LINC00486-201ENST00000414054 NACADO15069 1562 aa16.4■□□□□ 0.22
LINC00486-201ENST00000414054 DCAF8L2P0C7V8 631 aa16.37■□□□□ 0.21
LINC00486-201ENST00000414054 ZCCHC6Q5VYS8 1495 aaKnown RBP16.24■□□□□ 0.19
LINC00486-201ENST00000414054 MYO15BQ96JP2 1530 aa16.23■□□□□ 0.19
LINC00486-201ENST00000414054 UNC13AQ9UPW8 1703 aa16.17■□□□□ 0.18
LINC00486-201ENST00000414054 DCAF1Q9Y4B6 1507 aa16.13■□□□□ 0.17
LINC00486-201ENST00000414054 PABPN1Q86U42 306 aaKnown RBP eCLIP16.04■□□□□ 0.16
LINC00486-201ENST00000414054 BICRAQ9NZM4 1560 aa16■□□□□ 0.15
LINC00486-201ENST00000414054 DNAJC5BQ9UF47 199 aa15.92■□□□□ 0.14
LINC00486-201ENST00000414054 SCRIBQ14160 1630 aa15.92■□□□□ 0.14
LINC00486-201ENST00000414054 SHROOM4Q9ULL8 1493 aa15.75■□□□□ 0.11
LINC00486-201ENST00000414054 AEBP2Q6ZN18 517 aaPredicted RBP15.72■□□□□ 0.11
LINC00486-201ENST00000414054 EIF4G1Q04637 1599 aaKnown RBP15.57■□□□□ 0.08
LINC00486-201ENST00000414054 CC2D2AQ9P2K1 1620 aa15.56■□□□□ 0.08
LINC00486-201ENST00000414054 CECR2Q9BXF3 1484 aa15.45■□□□□ 0.06
LINC00486-201ENST00000414054 SUPT5HO00267 1087 aaKnown RBP15.36■□□□□ 0.05
LINC00486-201ENST00000414054 SMARCA4P51532 1647 aa15.2■□□□□ 0.02
LINC00486-201ENST00000414054 BAZ1AQ9NRL2 1556 aaPredicted RBP15.14■□□□□ 0.01
LINC00486-201ENST00000414054 NCAPD3P42695 1498 aa15.13■□□□□ 0.01
LINC00486-201ENST00000414054 ATAD2BQ9ULI0 1458 aa15.13■□□□□ 0.01
LINC00486-201ENST00000414054 SMARCA2P51531 1590 aa15.1■□□□□ 0.01
LINC00486-201ENST00000414054 MROH2BQ7Z745 1585 aa15.07■□□□□ 0
LINC00486-201ENST00000414054 HMGXB3Q12766 1538 aa15.05■□□□□ -0
LINC00486-201ENST00000414054 PEG3Q9GZU2 1588 aa15.04■□□□□ -0
LINC00486-201ENST00000414054 BAZ1BQ9UIG0 1483 aaKnown RBP15□□□□□ -0.01
LINC00486-201ENST00000414054 WIZO95785 1651 aa14.92□□□□□ -0.02
LINC00486-201ENST00000414054 NESP48681 1621 aa14.85□□□□□ -0.03
LINC00486-201ENST00000414054 RSF1Q96T23 1441 aaPredicted RBP14.85□□□□□ -0.03
LINC00486-201ENST00000414054 ERCC6Q03468 1493 aa14.8□□□□□ -0.04
LINC00486-201ENST00000414054 LAMC3Q9Y6N6 1575 aa14.76□□□□□ -0.05
LINC00486-201ENST00000414054 TOP2AP11388 1531 aaKnown RBP14.71□□□□□ -0.05
LINC00486-201ENST00000414054 KIF21AQ7Z4S6 1674 aa14.7□□□□□ -0.06
LINC00486-201ENST00000414054 CADPSQ9ULU8 1353 aa14.68□□□□□ -0.06
LINC00486-201ENST00000414054 CUX2O14529 1486 aa14.68□□□□□ -0.06
LINC00486-201ENST00000414054 THOC2Q8NI27 1593 aaKnown RBP14.65□□□□□ -0.06
LINC00486-201ENST00000414054 PDS5BQ9NTI5 1447 aa14.65□□□□□ -0.06
LINC00486-201ENST00000414054 PHF23Q9BUL5 403 aaPredicted RBP14.62□□□□□ -0.07
LINC00486-201ENST00000414054 DNAJC5Q9H3Z4 198 aa14.62□□□□□ -0.07
LINC00486-201ENST00000414054 CFTRP13569 1480 aa14.57□□□□□ -0.08
LINC00486-201ENST00000414054 CCDC88BA6NC98 1476 aa14.55□□□□□ -0.08
LINC00486-201ENST00000414054 FANCD2Q9BXW9 1451 aa14.52□□□□□ -0.08
LINC00486-201ENST00000414054 MRC2Q9UBG0 1479 aa14.52□□□□□ -0.09
LINC00486-201ENST00000414054 CEP164Q9UPV0 1460 aa14.52□□□□□ -0.09
LINC00486-201ENST00000414054 PRDM2Q13029 1718 aa14.5□□□□□ -0.09
LINC00486-201ENST00000414054 WDR62O43379 1518 aa14.49□□□□□ -0.09
LINC00486-201ENST00000414054 TRIM41Q8WV44 630 aa14.44□□□□□ -0.1
LINC00486-201ENST00000414054 URB2Q14146 1524 aaKnown RBP14.41□□□□□ -0.1
LINC00486-201ENST00000414054 LOC105371045A0A1W2PR82 267 aa14.32□□□□□ -0.12
LINC00486-201ENST00000414054 TOPBP1Q92547 1522 aa14.29□□□□□ -0.12
LINC00486-201ENST00000414054 DNMBPQ6XZF7 1577 aa14.25□□□□□ -0.13
LINC00486-201ENST00000414054 ABCC8Q09428 1581 aa14.24□□□□□ -0.13
LINC00486-201ENST00000414054 IFT140Q96RY7 1462 aa14.21□□□□□ -0.14
LINC00486-201ENST00000414054 ZNF608Q9ULD9 1512 aaPredicted RBP14.2□□□□□ -0.14
LINC00486-201ENST00000414054 FAM9AQ8IZU1 332 aaPredicted RBP14.16□□□□□ -0.14
LINC00486-201ENST00000414054 TARBP1Q13395 1621 aaKnown RBP14.16□□□□□ -0.14
LINC00486-201ENST00000414054 POLA1P09884 1462 aaPredicted RBP14.16□□□□□ -0.14
LINC00486-201ENST00000414054 CUX1P39880 1505 aa14.14□□□□□ -0.15
LINC00486-201ENST00000414054 EIF4G3O43432 1585 aaKnown RBP14.14□□□□□ -0.15
LINC00486-201ENST00000414054 PCGF6Q9BYE7 350 aa14.12□□□□□ -0.15
LINC00486-201ENST00000414054 FGD5Q6ZNL6 1462 aa14.11□□□□□ -0.15
LINC00486-201ENST00000414054 RAD54L2Q9Y4B4 1467 aa14.11□□□□□ -0.15
LINC00486-201ENST00000414054 MYT1Q01538 1121 aa14.09□□□□□ -0.15
LINC00486-201ENST00000414054 AQRO60306 1485 aaKnown RBP eCLIP14.09□□□□□ -0.15
LINC00486-201ENST00000414054 SOGA1O94964 1423 aa14.08□□□□□ -0.16
LINC00486-201ENST00000414054 OSCARQ8IYS5 282 aa14.05□□□□□ -0.16
LINC00486-201ENST00000414054 TRIM26Q12899 539 aaPredicted RBP14.04□□□□□ -0.16
LINC00486-201ENST00000414054 PELP1Q8IZL8 1130 aaKnown RBP14.04□□□□□ -0.16
LINC00486-201ENST00000414054 TDRD9Q8NDG6 1382 aaKnown RBP14.03□□□□□ -0.16
LINC00486-201ENST00000414054 EEA1Q15075 1411 aa14.03□□□□□ -0.16
LINC00486-201ENST00000414054 HRCP23327 699 aa14.03□□□□□ -0.16
LINC00486-201ENST00000414054 WDR97A6NE52 1622 aa14.02□□□□□ -0.16
LINC00486-201ENST00000414054 CHD1O14646 1710 aa14.01□□□□□ -0.17
LINC00486-201ENST00000414054 WRNQ14191 1432 aaPredicted RBP eCLIP13.99□□□□□ -0.17
LINC00486-201ENST00000414054 SYNJ1O43426 1573 aa13.98□□□□□ -0.17
LINC00486-201ENST00000414054 BIVM-ERCC5R4GMW8 1640 aa13.98□□□□□ -0.17
LINC00486-201ENST00000414054 TOP2BQ02880 1626 aa13.98□□□□□ -0.17
LINC00486-201ENST00000414054 SNAPC4Q5SXM2 1469 aa13.95□□□□□ -0.18
LINC00486-201ENST00000414054 ABCA10Q8WWZ4 1543 aa13.94□□□□□ -0.18
LINC00486-201ENST00000414054 PBRM1Q86U86 1689 aa13.94□□□□□ -0.18
LINC00486-201ENST00000414054 EHMT2Q96KQ7 1210 aa13.94□□□□□ -0.18
LINC00486-201ENST00000414054 FBLN2P98095 1184 aa13.93□□□□□ -0.18
LINC00486-201ENST00000414054 GRIN2BQ13224 1484 aa13.93□□□□□ -0.18
LINC00486-201ENST00000414054 ABCA5Q8WWZ7 1642 aa13.93□□□□□ -0.18
LINC00486-201ENST00000414054 GAPVD1Q14C86 1478 aa13.92□□□□□ -0.18
LINC00486-201ENST00000414054 MAGI1Q96QZ7 1491 aaPredicted RBP13.9□□□□□ -0.18
LINC00486-201ENST00000414054 RIMBP3CA6NJZ7 1639 aa13.89□□□□□ -0.19
LINC00486-201ENST00000414054 RIMBP3BA6NNM3 1639 aa13.89□□□□□ -0.19
LINC00486-201ENST00000414054 RIMBP3Q9UFD9 1639 aa13.89□□□□□ -0.19
LINC00486-201ENST00000414054 CSRNP3Q8WYN3 585 aa13.88□□□□□ -0.19
LINC00486-201ENST00000414054 TNIKQ9UKE5 1360 aa13.86□□□□□ -0.19
LINC00486-201ENST00000414054 CHMP7Q8WUX9 453 aaPredicted RBP13.86□□□□□ -0.19
LINC00486-201ENST00000414054 ARHGEF11O15085 1522 aa13.85□□□□□ -0.19
LINC00486-201ENST00000414054 SYNJ2O15056 1496 aa13.85□□□□□ -0.19
LINC00486-201ENST00000414054 GOLGA3Q08378 1498 aa13.84□□□□□ -0.19
LINC00486-201ENST00000414054 PLPPR3Q6T4P5 718 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms