RNA–Protein interactions for RNA: ENST00000413147.1

IFNA12P-201, Transcript of interferon alpha 12, pseudogene, humanhuman

BASIC

Gene IFNA12P, Length 571 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA12P-201ENST00000413147 NISCHQ9Y2I1 1504 aa19.68■□□□□ 0.74
IFNA12P-201ENST00000413147 AEBP2Q6ZN18 517 aaPredicted RBP18.19■□□□□ 0.5
IFNA12P-201ENST00000413147 CCDC180Q9P1Z9 1646 aa17.76■□□□□ 0.43
IFNA12P-201ENST00000413147 ABCC9O60706 1549 aa17.67■□□□□ 0.42
IFNA12P-201ENST00000413147 CHIC1Q5VXU3 224 aa17.16■□□□□ 0.34
IFNA12P-201ENST00000413147 RB1CC1Q8TDY2 1594 aa16.88■□□□□ 0.29
IFNA12P-201ENST00000413147 NACADO15069 1562 aa16.77■□□□□ 0.27
IFNA12P-201ENST00000413147 DNAJC5BQ9UF47 199 aa16.64■□□□□ 0.25
IFNA12P-201ENST00000413147 UNC13AQ9UPW8 1703 aa16.57■□□□□ 0.24
IFNA12P-201ENST00000413147 MYO15BQ96JP2 1530 aa16.57■□□□□ 0.24
IFNA12P-201ENST00000413147 DCAF8L2P0C7V8 631 aa16.47■□□□□ 0.23
IFNA12P-201ENST00000413147 BICRAQ9NZM4 1560 aa16.4■□□□□ 0.22
IFNA12P-201ENST00000413147 PABPN1Q86U42 306 aaKnown RBP eCLIP16.4■□□□□ 0.22
IFNA12P-201ENST00000413147 DCAF1Q9Y4B6 1507 aa16.32■□□□□ 0.2
IFNA12P-201ENST00000413147 ZCCHC6Q5VYS8 1495 aaKnown RBP16.3■□□□□ 0.2
IFNA12P-201ENST00000413147 SHROOM4Q9ULL8 1493 aa16.22■□□□□ 0.19
IFNA12P-201ENST00000413147 SCRIBQ14160 1630 aa16.06■□□□□ 0.16
IFNA12P-201ENST00000413147 CC2D2AQ9P2K1 1620 aa16.03■□□□□ 0.16
IFNA12P-201ENST00000413147 EIF4G1Q04637 1599 aaKnown RBP15.99■□□□□ 0.15
IFNA12P-201ENST00000413147 CECR2Q9BXF3 1484 aa15.96■□□□□ 0.14
IFNA12P-201ENST00000413147 SENP3Q9H4L4 574 aaPredicted RBP15.76■□□□□ 0.11
IFNA12P-201ENST00000413147 NCAPD3P42695 1498 aa15.46■□□□□ 0.07
IFNA12P-201ENST00000413147 PHF23Q9BUL5 403 aaPredicted RBP15.41■□□□□ 0.06
IFNA12P-201ENST00000413147 ATAD2BQ9ULI0 1458 aa15.38■□□□□ 0.05
IFNA12P-201ENST00000413147 SMARCA4P51532 1647 aa15.37■□□□□ 0.05
IFNA12P-201ENST00000413147 DNAJC5Q9H3Z4 198 aa15.37■□□□□ 0.05
IFNA12P-201ENST00000413147 SMARCA2P51531 1590 aa15.36■□□□□ 0.05
IFNA12P-201ENST00000413147 HMGXB3Q12766 1538 aa15.36■□□□□ 0.05
IFNA12P-201ENST00000413147 CUX2O14529 1486 aa15.33■□□□□ 0.05
IFNA12P-201ENST00000413147 BAZ1AQ9NRL2 1556 aaPredicted RBP15.28■□□□□ 0.04
IFNA12P-201ENST00000413147 PEG3Q9GZU2 1588 aa15.28■□□□□ 0.04
IFNA12P-201ENST00000413147 ERCC6Q03468 1493 aa15.27■□□□□ 0.03
IFNA12P-201ENST00000413147 BAZ1BQ9UIG0 1483 aaKnown RBP15.21■□□□□ 0.03
IFNA12P-201ENST00000413147 NESP48681 1621 aa15.17■□□□□ 0.02
IFNA12P-201ENST00000413147 MROH2BQ7Z745 1585 aa15.14■□□□□ 0.01
IFNA12P-201ENST00000413147 LAMC3Q9Y6N6 1575 aa15.14■□□□□ 0.01
IFNA12P-201ENST00000413147 THOC2Q8NI27 1593 aaKnown RBP15.11■□□□□ 0.01
IFNA12P-201ENST00000413147 KIF21AQ7Z4S6 1674 aa15.05■□□□□ -0
IFNA12P-201ENST00000413147 PDS5BQ9NTI5 1447 aa15.01□□□□□ -0.01
IFNA12P-201ENST00000413147 WIZO95785 1651 aa14.97□□□□□ -0.01
IFNA12P-201ENST00000413147 CADPSQ9ULU8 1353 aa14.96□□□□□ -0.02
IFNA12P-201ENST00000413147 MRC2Q9UBG0 1479 aa14.89□□□□□ -0.03
IFNA12P-201ENST00000413147 WDR62O43379 1518 aa14.88□□□□□ -0.03
IFNA12P-201ENST00000413147 RSF1Q96T23 1441 aaPredicted RBP14.8□□□□□ -0.04
IFNA12P-201ENST00000413147 CFTRP13569 1480 aa14.8□□□□□ -0.04
IFNA12P-201ENST00000413147 CEP164Q9UPV0 1460 aa14.8□□□□□ -0.04
IFNA12P-201ENST00000413147 TOP2AP11388 1531 aaKnown RBP14.78□□□□□ -0.04
IFNA12P-201ENST00000413147 FANCD2Q9BXW9 1451 aa14.78□□□□□ -0.04
IFNA12P-201ENST00000413147 PRDM2Q13029 1718 aa14.75□□□□□ -0.05
IFNA12P-201ENST00000413147 URB2Q14146 1524 aaKnown RBP14.67□□□□□ -0.06
IFNA12P-201ENST00000413147 FOXD1Q16676 465 aa14.65□□□□□ -0.06
IFNA12P-201ENST00000413147 CCDC88BA6NC98 1476 aa14.58□□□□□ -0.08
IFNA12P-201ENST00000413147 OSCARQ8IYS5 282 aa14.57□□□□□ -0.08
IFNA12P-201ENST00000413147 TRIM41Q8WV44 630 aa14.55□□□□□ -0.08
IFNA12P-201ENST00000413147 IFT140Q96RY7 1462 aa14.53□□□□□ -0.08
IFNA12P-201ENST00000413147 POTEDQ86YR6 584 aa14.52□□□□□ -0.09
IFNA12P-201ENST00000413147 ABCC8Q09428 1581 aa14.51□□□□□ -0.09
IFNA12P-201ENST00000413147 TOPBP1Q92547 1522 aa14.51□□□□□ -0.09
IFNA12P-201ENST00000413147 ZNF608Q9ULD9 1512 aaPredicted RBP14.48□□□□□ -0.09
IFNA12P-201ENST00000413147 DNMBPQ6XZF7 1577 aa14.47□□□□□ -0.09
IFNA12P-201ENST00000413147 EIF4G3O43432 1585 aaKnown RBP14.43□□□□□ -0.1
IFNA12P-201ENST00000413147 RIMBP3CA6NJZ7 1639 aa14.43□□□□□ -0.1
IFNA12P-201ENST00000413147 RIMBP3BA6NNM3 1639 aa14.43□□□□□ -0.1
IFNA12P-201ENST00000413147 RIMBP3Q9UFD9 1639 aa14.43□□□□□ -0.1
IFNA12P-201ENST00000413147 TARBP1Q13395 1621 aaKnown RBP14.42□□□□□ -0.1
IFNA12P-201ENST00000413147 CHD1O14646 1710 aa14.37□□□□□ -0.11
IFNA12P-201ENST00000413147 ARHGEF11O15085 1522 aa14.36□□□□□ -0.11
IFNA12P-201ENST00000413147 POLA1P09884 1462 aaPredicted RBP14.35□□□□□ -0.11
IFNA12P-201ENST00000413147 AQRO60306 1485 aaKnown RBP eCLIP14.32□□□□□ -0.12
IFNA12P-201ENST00000413147 WDR97A6NE52 1622 aa14.32□□□□□ -0.12
IFNA12P-201ENST00000413147 SOGA1O94964 1423 aa14.26□□□□□ -0.13
IFNA12P-201ENST00000413147 RAD54L2Q9Y4B4 1467 aa14.25□□□□□ -0.13
IFNA12P-201ENST00000413147 FGD5Q6ZNL6 1462 aa14.24□□□□□ -0.13
IFNA12P-201ENST00000413147 CUX1P39880 1505 aa14.23□□□□□ -0.13
IFNA12P-201ENST00000413147 TDRD9Q8NDG6 1382 aaKnown RBP14.22□□□□□ -0.13
IFNA12P-201ENST00000413147 ARAP1Q96P48 1450 aa14.21□□□□□ -0.13
IFNA12P-201ENST00000413147 MAGI1Q96QZ7 1491 aaPredicted RBP14.19□□□□□ -0.14
IFNA12P-201ENST00000413147 CYB5RLQ6IPT4 315 aa14.19□□□□□ -0.14
IFNA12P-201ENST00000413147 CLASP1Q7Z460 1538 aa14.19□□□□□ -0.14
IFNA12P-201ENST00000413147 SNAPC4Q5SXM2 1469 aa14.18□□□□□ -0.14
IFNA12P-201ENST00000413147 FBLN2P98095 1184 aa14.17□□□□□ -0.14
IFNA12P-201ENST00000413147 GRIN2BQ13224 1484 aa14.17□□□□□ -0.14
IFNA12P-201ENST00000413147 SYNJ1O43426 1573 aa14.16□□□□□ -0.14
IFNA12P-201ENST00000413147 PBRM1Q86U86 1689 aa14.15□□□□□ -0.14
IFNA12P-201ENST00000413147 SYNJ2O15056 1496 aa14.14□□□□□ -0.15
IFNA12P-201ENST00000413147 ABCA5Q8WWZ7 1642 aa14.12□□□□□ -0.15
IFNA12P-201ENST00000413147 ABCA10Q8WWZ4 1543 aa14.11□□□□□ -0.15
IFNA12P-201ENST00000413147 CHMP7Q8WUX9 453 aaPredicted RBP14.11□□□□□ -0.15
IFNA12P-201ENST00000413147 GAPVD1Q14C86 1478 aa14.1□□□□□ -0.15
IFNA12P-201ENST00000413147 MSH5O43196 834 aa14.04□□□□□ -0.16
IFNA12P-201ENST00000413147 BIVM-ERCC5R4GMW8 1640 aa14.04□□□□□ -0.16
IFNA12P-201ENST00000413147 TOP2BQ02880 1626 aa14.02□□□□□ -0.16
IFNA12P-201ENST00000413147 WRNQ14191 1432 aaPredicted RBP eCLIP14.01□□□□□ -0.17
IFNA12P-201ENST00000413147 TRHP20396 242 aaPredicted RBP14.01□□□□□ -0.17
IFNA12P-201ENST00000413147 ADAMTS12P58397 1594 aa13.99□□□□□ -0.17
IFNA12P-201ENST00000413147 GRIN2AQ12879 1464 aa13.99□□□□□ -0.17
IFNA12P-201ENST00000413147 SUPT5HO00267 1087 aaKnown RBP13.97□□□□□ -0.17
IFNA12P-201ENST00000413147 NUP160Q12769 1436 aa13.96□□□□□ -0.18
IFNA12P-201ENST00000413147 SHROOM2Q13796 1616 aa13.95□□□□□ -0.18
IFNA12P-201ENST00000413147 CEP170Q5SW79 1584 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms