RNA–Protein interactions for RNA: ENST00000412853.1

CTTNBP2-202, Transcript of cortactin binding protein 2, humanhuman

TSL 4

Gene CTTNBP2, Length 470 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTNBP2-202ENST00000412853 NISCHQ9Y2I1 1504 aa28.48■■■□□ 2.15
CTTNBP2-202ENST00000412853 ABCC9O60706 1549 aa26.09■■□□□ 1.77
CTTNBP2-202ENST00000412853 CCDC180Q9P1Z9 1646 aa25.7■■□□□ 1.7
CTTNBP2-202ENST00000412853 RB1CC1Q8TDY2 1594 aa24.67■■□□□ 1.54
CTTNBP2-202ENST00000412853 DNAJC5BQ9UF47 199 aa24.62■■□□□ 1.53
CTTNBP2-202ENST00000412853 DCAF8L2P0C7V8 631 aa24.43■■□□□ 1.5
CTTNBP2-202ENST00000412853 NACADO15069 1562 aa24.39■■□□□ 1.5
CTTNBP2-202ENST00000412853 PABPN1Q86U42 306 aaKnown RBP eCLIP24.26■■□□□ 1.47
CTTNBP2-202ENST00000412853 UNC13AQ9UPW8 1703 aa23.99■■□□□ 1.43
CTTNBP2-202ENST00000412853 MYO15BQ96JP2 1530 aa23.88■■□□□ 1.41
CTTNBP2-202ENST00000412853 BICRAQ9NZM4 1560 aa23.84■■□□□ 1.41
CTTNBP2-202ENST00000412853 SHROOM4Q9ULL8 1493 aa23.56■■□□□ 1.36
CTTNBP2-202ENST00000412853 ZCCHC6Q5VYS8 1495 aaKnown RBP23.54■■□□□ 1.36
CTTNBP2-202ENST00000412853 CECR2Q9BXF3 1484 aa23.53■■□□□ 1.36
CTTNBP2-202ENST00000412853 CC2D2AQ9P2K1 1620 aa23.5■■□□□ 1.35
CTTNBP2-202ENST00000412853 SCRIBQ14160 1630 aa23.48■■□□□ 1.35
CTTNBP2-202ENST00000412853 DCAF1Q9Y4B6 1507 aa23.46■■□□□ 1.35
CTTNBP2-202ENST00000412853 EIF4G1Q04637 1599 aaKnown RBP23.36■■□□□ 1.33
CTTNBP2-202ENST00000412853 DNAJC5Q9H3Z4 198 aa22.9■■□□□ 1.26
CTTNBP2-202ENST00000412853 ERCC6Q03468 1493 aa22.65■■□□□ 1.22
CTTNBP2-202ENST00000412853 AEBP2Q6ZN18 517 aaPredicted RBP22.64■■□□□ 1.21
CTTNBP2-202ENST00000412853 CUX2O14529 1486 aa22.6■■□□□ 1.21
CTTNBP2-202ENST00000412853 NCAPD3P42695 1498 aa22.48■■□□□ 1.19
CTTNBP2-202ENST00000412853 ATAD2BQ9ULI0 1458 aa22.4■■□□□ 1.18
CTTNBP2-202ENST00000412853 SMARCA2P51531 1590 aa22.38■■□□□ 1.17
CTTNBP2-202ENST00000412853 HMGXB3Q12766 1538 aa22.31■■□□□ 1.16
CTTNBP2-202ENST00000412853 SMARCA4P51532 1647 aa22.31■■□□□ 1.16
CTTNBP2-202ENST00000412853 NESP48681 1621 aa22.28■■□□□ 1.16
CTTNBP2-202ENST00000412853 BAZ1BQ9UIG0 1483 aaKnown RBP22.25■■□□□ 1.15
CTTNBP2-202ENST00000412853 BAZ1AQ9NRL2 1556 aaPredicted RBP22.18■■□□□ 1.14
CTTNBP2-202ENST00000412853 THOC2Q8NI27 1593 aaKnown RBP22.08■■□□□ 1.12
CTTNBP2-202ENST00000412853 LAMC3Q9Y6N6 1575 aa22.08■■□□□ 1.12
CTTNBP2-202ENST00000412853 PDS5BQ9NTI5 1447 aa22.02■■□□□ 1.12
CTTNBP2-202ENST00000412853 PEG3Q9GZU2 1588 aa22.02■■□□□ 1.12
CTTNBP2-202ENST00000412853 KIF21AQ7Z4S6 1674 aa21.97■■□□□ 1.11
CTTNBP2-202ENST00000412853 MROH2BQ7Z745 1585 aa21.95■■□□□ 1.1
CTTNBP2-202ENST00000412853 TRIM41Q8WV44 630 aa21.94■■□□□ 1.1
CTTNBP2-202ENST00000412853 CADPSQ9ULU8 1353 aa21.85■■□□□ 1.09
CTTNBP2-202ENST00000412853 MRC2Q9UBG0 1479 aa21.83■■□□□ 1.08
CTTNBP2-202ENST00000412853 WDR62O43379 1518 aa21.72■■□□□ 1.07
CTTNBP2-202ENST00000412853 CEP164Q9UPV0 1460 aa21.71■■□□□ 1.07
CTTNBP2-202ENST00000412853 CHIC1Q5VXU3 224 aa21.7■■□□□ 1.06
CTTNBP2-202ENST00000412853 WIZO95785 1651 aa21.69■■□□□ 1.06
CTTNBP2-202ENST00000412853 FANCD2Q9BXW9 1451 aa21.62■■□□□ 1.05
CTTNBP2-202ENST00000412853 OSCARQ8IYS5 282 aa21.57■■□□□ 1.04
CTTNBP2-202ENST00000412853 CFTRP13569 1480 aa21.49■■□□□ 1.03
CTTNBP2-202ENST00000412853 URB2Q14146 1524 aaKnown RBP21.41■■□□□ 1.02
CTTNBP2-202ENST00000412853 TOP2AP11388 1531 aaKnown RBP21.4■■□□□ 1.02
CTTNBP2-202ENST00000412853 RSF1Q96T23 1441 aaPredicted RBP21.38■■□□□ 1.01
CTTNBP2-202ENST00000412853 IFT140Q96RY7 1462 aa21.26■□□□□ 0.99
CTTNBP2-202ENST00000412853 PRDM2Q13029 1718 aa21.25■□□□□ 0.99
CTTNBP2-202ENST00000412853 RIMBP3CA6NJZ7 1639 aa21.25■□□□□ 0.99
CTTNBP2-202ENST00000412853 RIMBP3BA6NNM3 1639 aa21.25■□□□□ 0.99
CTTNBP2-202ENST00000412853 RIMBP3Q9UFD9 1639 aa21.25■□□□□ 0.99
CTTNBP2-202ENST00000412853 ZNF608Q9ULD9 1512 aaPredicted RBP21.21■□□□□ 0.99
CTTNBP2-202ENST00000412853 ARHGEF11O15085 1522 aa21.16■□□□□ 0.98
CTTNBP2-202ENST00000412853 CCDC88BA6NC98 1476 aa21.16■□□□□ 0.98
CTTNBP2-202ENST00000412853 TOPBP1Q92547 1522 aa21.15■□□□□ 0.98
CTTNBP2-202ENST00000412853 ABCC8Q09428 1581 aa21.11■□□□□ 0.97
CTTNBP2-202ENST00000412853 CYB5RLQ6IPT4 315 aa21.11■□□□□ 0.97
CTTNBP2-202ENST00000412853 FBLN2P98095 1184 aa21.1■□□□□ 0.97
CTTNBP2-202ENST00000412853 EIF4G3O43432 1585 aaKnown RBP21.1■□□□□ 0.97
CTTNBP2-202ENST00000412853 TRHP20396 242 aaPredicted RBP21.07■□□□□ 0.96
CTTNBP2-202ENST00000412853 DNMBPQ6XZF7 1577 aa21.06■□□□□ 0.96
CTTNBP2-202ENST00000412853 AQRO60306 1485 aaKnown RBP eCLIP21.01■□□□□ 0.95
CTTNBP2-202ENST00000412853 CHD1O14646 1710 aa20.99■□□□□ 0.95
CTTNBP2-202ENST00000412853 TARBP1Q13395 1621 aaKnown RBP20.93■□□□□ 0.94
CTTNBP2-202ENST00000412853 POLA1P09884 1462 aaPredicted RBP20.91■□□□□ 0.94
CTTNBP2-202ENST00000412853 ARAP1Q96P48 1450 aa20.91■□□□□ 0.94
CTTNBP2-202ENST00000412853 RAD54L2Q9Y4B4 1467 aa20.86■□□□□ 0.93
CTTNBP2-202ENST00000412853 SOGA1O94964 1423 aa20.86■□□□□ 0.93
CTTNBP2-202ENST00000412853 TDRD9Q8NDG6 1382 aaKnown RBP20.85■□□□□ 0.93
CTTNBP2-202ENST00000412853 CHMP7Q8WUX9 453 aaPredicted RBP20.84■□□□□ 0.93
CTTNBP2-202ENST00000412853 SNAPC4Q5SXM2 1469 aa20.81■□□□□ 0.92
CTTNBP2-202ENST00000412853 SYNJ1O43426 1573 aa20.76■□□□□ 0.91
CTTNBP2-202ENST00000412853 FGD5Q6ZNL6 1462 aa20.76■□□□□ 0.91
CTTNBP2-202ENST00000412853 WDR97A6NE52 1622 aa20.74■□□□□ 0.91
CTTNBP2-202ENST00000412853 MAGI1Q96QZ7 1491 aaPredicted RBP20.73■□□□□ 0.91
CTTNBP2-202ENST00000412853 GRIN2BQ13224 1484 aa20.71■□□□□ 0.91
CTTNBP2-202ENST00000412853 CLASP1Q7Z460 1538 aa20.7■□□□□ 0.9
CTTNBP2-202ENST00000412853 SYNJ2O15056 1496 aa20.66■□□□□ 0.9
CTTNBP2-202ENST00000412853 CUX1P39880 1505 aa20.65■□□□□ 0.9
CTTNBP2-202ENST00000412853 GAPVD1Q14C86 1478 aa20.59■□□□□ 0.89
CTTNBP2-202ENST00000412853 PBRM1Q86U86 1689 aa20.58■□□□□ 0.88
CTTNBP2-202ENST00000412853 ABCA10Q8WWZ4 1543 aa20.48■□□□□ 0.87
CTTNBP2-202ENST00000412853 ABCA5Q8WWZ7 1642 aa20.45■□□□□ 0.86
CTTNBP2-202ENST00000412853 GRIN2AQ12879 1464 aa20.42■□□□□ 0.86
CTTNBP2-202ENST00000412853 SUPT5HO00267 1087 aaKnown RBP20.4■□□□□ 0.86
CTTNBP2-202ENST00000412853 WRNQ14191 1432 aaPredicted RBP eCLIP20.4■□□□□ 0.86
CTTNBP2-202ENST00000412853 ERCC6L2Q5T890 1561 aa20.36■□□□□ 0.85
CTTNBP2-202ENST00000412853 ADAMTS12P58397 1594 aa20.35■□□□□ 0.85
CTTNBP2-202ENST00000412853 CEP170Q5SW79 1584 aa20.34■□□□□ 0.85
CTTNBP2-202ENST00000412853 FHAD1B1AJZ9 1412 aa20.32■□□□□ 0.84
CTTNBP2-202ENST00000412853 NUP160Q12769 1436 aa20.32■□□□□ 0.84
CTTNBP2-202ENST00000412853 TOP2BQ02880 1626 aa20.24■□□□□ 0.83
CTTNBP2-202ENST00000412853 PRG4Q92954 1404 aaPredicted RBP20.23■□□□□ 0.83
CTTNBP2-202ENST00000412853 SHROOM2Q13796 1616 aa20.23■□□□□ 0.83
CTTNBP2-202ENST00000412853 BIVM-ERCC5R4GMW8 1640 aa20.23■□□□□ 0.83
CTTNBP2-202ENST00000412853 ERICH3Q5RHP9 1530 aa20.22■□□□□ 0.83
CTTNBP2-202ENST00000412853 NPM1P06748 294 aaKnown RBP eCLIP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms