RNA–Protein interactions for RNA: ENST00000409674.5

GPD2-203, Transcript of glycerol-3-phosphate dehydrogenase 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GPD2, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD2-203ENST00000409674 NISCHQ9Y2I1 1504 aa17.45■□□□□ 0.38
GPD2-203ENST00000409674 ABCC9O60706 1549 aa16.03■□□□□ 0.16
GPD2-203ENST00000409674 CCDC180Q9P1Z9 1646 aa15.83■□□□□ 0.13
GPD2-203ENST00000409674 DNAJC5BQ9UF47 199 aa15.35■□□□□ 0.05
GPD2-203ENST00000409674 RB1CC1Q8TDY2 1594 aa15.21■□□□□ 0.03
GPD2-203ENST00000409674 NACADO15069 1562 aa15.07■□□□□ 0
GPD2-203ENST00000409674 AEBP2Q6ZN18 517 aaPredicted RBP14.95□□□□□ -0.02
GPD2-203ENST00000409674 PABPN1Q86U42 306 aaKnown RBP eCLIP14.84□□□□□ -0.03
GPD2-203ENST00000409674 MYO15BQ96JP2 1530 aa14.83□□□□□ -0.04
GPD2-203ENST00000409674 BICRAQ9NZM4 1560 aa14.76□□□□□ -0.05
GPD2-203ENST00000409674 UNC13AQ9UPW8 1703 aa14.76□□□□□ -0.05
GPD2-203ENST00000409674 SHROOM4Q9ULL8 1493 aa14.68□□□□□ -0.06
GPD2-203ENST00000409674 DCAF8L2P0C7V8 631 aa14.68□□□□□ -0.06
GPD2-203ENST00000409674 CECR2Q9BXF3 1484 aa14.53□□□□□ -0.08
GPD2-203ENST00000409674 CC2D2AQ9P2K1 1620 aa14.5□□□□□ -0.09
GPD2-203ENST00000409674 DCAF1Q9Y4B6 1507 aa14.49□□□□□ -0.09
GPD2-203ENST00000409674 CHIC1Q5VXU3 224 aa14.45□□□□□ -0.1
GPD2-203ENST00000409674 DNAJC5Q9H3Z4 198 aa14.42□□□□□ -0.1
GPD2-203ENST00000409674 EIF4G1Q04637 1599 aaKnown RBP14.41□□□□□ -0.1
GPD2-203ENST00000409674 ZCCHC6Q5VYS8 1495 aaKnown RBP14.39□□□□□ -0.11
GPD2-203ENST00000409674 SCRIBQ14160 1630 aa14.27□□□□□ -0.12
GPD2-203ENST00000409674 PELP1Q8IZL8 1130 aaKnown RBP14.21□□□□□ -0.13
GPD2-203ENST00000409674 MYT1Q01538 1121 aa14.16□□□□□ -0.14
GPD2-203ENST00000409674 CUX2O14529 1486 aa14.09□□□□□ -0.15
GPD2-203ENST00000409674 NCAPD3P42695 1498 aa13.92□□□□□ -0.18
GPD2-203ENST00000409674 ERCC6Q03468 1493 aa13.88□□□□□ -0.19
GPD2-203ENST00000409674 TTBK1Q5TCY1 1321 aaPredicted RBP13.78□□□□□ -0.2
GPD2-203ENST00000409674 ATAD2BQ9ULI0 1458 aa13.78□□□□□ -0.2
GPD2-203ENST00000409674 HMGXB3Q12766 1538 aa13.77□□□□□ -0.21
GPD2-203ENST00000409674 SLC24A1O60721 1099 aa13.77□□□□□ -0.21
GPD2-203ENST00000409674 SMARCA2P51531 1590 aa13.74□□□□□ -0.21
GPD2-203ENST00000409674 NESP48681 1621 aa13.67□□□□□ -0.22
GPD2-203ENST00000409674 THOC2Q8NI27 1593 aaKnown RBP13.67□□□□□ -0.22
GPD2-203ENST00000409674 SMARCA4P51532 1647 aa13.66□□□□□ -0.22
GPD2-203ENST00000409674 LAMC3Q9Y6N6 1575 aa13.62□□□□□ -0.23
GPD2-203ENST00000409674 PEG3Q9GZU2 1588 aa13.6□□□□□ -0.23
GPD2-203ENST00000409674 BAZ1BQ9UIG0 1483 aaKnown RBP13.6□□□□□ -0.23
GPD2-203ENST00000409674 BAZ1AQ9NRL2 1556 aaPredicted RBP13.57□□□□□ -0.24
GPD2-203ENST00000409674 PDS5BQ9NTI5 1447 aa13.56□□□□□ -0.24
GPD2-203ENST00000409674 TRIM41Q8WV44 630 aa13.5□□□□□ -0.25
GPD2-203ENST00000409674 KIF21AQ7Z4S6 1674 aa13.48□□□□□ -0.25
GPD2-203ENST00000409674 MRC2Q9UBG0 1479 aa13.45□□□□□ -0.26
GPD2-203ENST00000409674 CADPSQ9ULU8 1353 aa13.44□□□□□ -0.26
GPD2-203ENST00000409674 WDR62O43379 1518 aa13.44□□□□□ -0.26
GPD2-203ENST00000409674 PRKCSHP14314 528 aaPredicted RBP13.44□□□□□ -0.26
GPD2-203ENST00000409674 MROH2BQ7Z745 1585 aa13.39□□□□□ -0.27
GPD2-203ENST00000409674 OSCARQ8IYS5 282 aa13.33□□□□□ -0.28
GPD2-203ENST00000409674 CEP164Q9UPV0 1460 aa13.3□□□□□ -0.28
GPD2-203ENST00000409674 ERICH6Q7L0X2 663 aa13.28□□□□□ -0.28
GPD2-203ENST00000409674 FANCD2Q9BXW9 1451 aa13.25□□□□□ -0.29
GPD2-203ENST00000409674 APLP2Q06481 763 aa13.25□□□□□ -0.29
GPD2-203ENST00000409674 CFTRP13569 1480 aa13.23□□□□□ -0.29
GPD2-203ENST00000409674 WIZO95785 1651 aa13.17□□□□□ -0.3
GPD2-203ENST00000409674 URB2Q14146 1524 aaKnown RBP13.17□□□□□ -0.3
GPD2-203ENST00000409674 RIMBP3CA6NJZ7 1639 aa13.15□□□□□ -0.3
GPD2-203ENST00000409674 RIMBP3BA6NNM3 1639 aa13.15□□□□□ -0.3
GPD2-203ENST00000409674 RIMBP3Q9UFD9 1639 aa13.15□□□□□ -0.3
GPD2-203ENST00000409674 ARHGEF11O15085 1522 aa13.1□□□□□ -0.31
GPD2-203ENST00000409674 IFT140Q96RY7 1462 aa13.09□□□□□ -0.31
GPD2-203ENST00000409674 TOP2AP11388 1531 aaKnown RBP13.07□□□□□ -0.32
GPD2-203ENST00000409674 ZNF608Q9ULD9 1512 aaPredicted RBP13.03□□□□□ -0.32
GPD2-203ENST00000409674 RSF1Q96T23 1441 aaPredicted RBP13.02□□□□□ -0.32
GPD2-203ENST00000409674 PRDM2Q13029 1718 aa13.01□□□□□ -0.33
GPD2-203ENST00000409674 DAXXQ9UER7 740 aaPredicted RBP13.01□□□□□ -0.33
GPD2-203ENST00000409674 ABCC8Q09428 1581 aa13□□□□□ -0.33
GPD2-203ENST00000409674 TOPBP1Q92547 1522 aa12.98□□□□□ -0.33
GPD2-203ENST00000409674 CYB5RLQ6IPT4 315 aa12.96□□□□□ -0.33
GPD2-203ENST00000409674 ARAP1Q96P48 1450 aa12.95□□□□□ -0.34
GPD2-203ENST00000409674 EIF4G3O43432 1585 aaKnown RBP12.94□□□□□ -0.34
GPD2-203ENST00000409674 DNMBPQ6XZF7 1577 aa12.91□□□□□ -0.34
GPD2-203ENST00000409674 CCDC88BA6NC98 1476 aa12.9□□□□□ -0.35
GPD2-203ENST00000409674 TRHP20396 242 aaPredicted RBP12.89□□□□□ -0.35
GPD2-203ENST00000409674 TARBP1Q13395 1621 aaKnown RBP12.89□□□□□ -0.35
GPD2-203ENST00000409674 CHD1O14646 1710 aa12.88□□□□□ -0.35
GPD2-203ENST00000409674 AQRO60306 1485 aaKnown RBP eCLIP12.85□□□□□ -0.35
GPD2-203ENST00000409674 PHF23Q9BUL5 403 aaPredicted RBP12.85□□□□□ -0.35
GPD2-203ENST00000409674 WDR97A6NE52 1622 aa12.83□□□□□ -0.36
GPD2-203ENST00000409674 CLASP1Q7Z460 1538 aa12.81□□□□□ -0.36
GPD2-203ENST00000409674 POLA1P09884 1462 aaPredicted RBP12.81□□□□□ -0.36
GPD2-203ENST00000409674 BCL11AQ9H165 835 aa12.78□□□□□ -0.36
GPD2-203ENST00000409674 FBLN2P98095 1184 aa12.77□□□□□ -0.36
GPD2-203ENST00000409674 MAGI1Q96QZ7 1491 aaPredicted RBP12.76□□□□□ -0.37
GPD2-203ENST00000409674 SYNJ1O43426 1573 aa12.76□□□□□ -0.37
GPD2-203ENST00000409674 SOGA1O94964 1423 aa12.75□□□□□ -0.37
GPD2-203ENST00000409674 SNAPC4Q5SXM2 1469 aa12.74□□□□□ -0.37
GPD2-203ENST00000409674 RAD54L2Q9Y4B4 1467 aa12.72□□□□□ -0.37
GPD2-203ENST00000409674 TDRD9Q8NDG6 1382 aaKnown RBP12.72□□□□□ -0.37
GPD2-203ENST00000409674 GRIN2BQ13224 1484 aa12.71□□□□□ -0.38
GPD2-203ENST00000409674 CHMP7Q8WUX9 453 aaPredicted RBP12.7□□□□□ -0.38
GPD2-203ENST00000409674 SYNJ2O15056 1496 aa12.7□□□□□ -0.38
GPD2-203ENST00000409674 GAPVD1Q14C86 1478 aa12.67□□□□□ -0.38
GPD2-203ENST00000409674 FGD5Q6ZNL6 1462 aa12.67□□□□□ -0.38
GPD2-203ENST00000409674 CUX1P39880 1505 aa12.61□□□□□ -0.39
GPD2-203ENST00000409674 FAM9AQ8IZU1 332 aaPredicted RBP12.56□□□□□ -0.4
GPD2-203ENST00000409674 ABCA10Q8WWZ4 1543 aa12.56□□□□□ -0.4
GPD2-203ENST00000409674 PBRM1Q86U86 1689 aa12.56□□□□□ -0.4
GPD2-203ENST00000409674 ABCA5Q8WWZ7 1642 aa12.55□□□□□ -0.4
GPD2-203ENST00000409674 NUP160Q12769 1436 aa12.54□□□□□ -0.4
GPD2-203ENST00000409674 GRIN2AQ12879 1464 aa12.52□□□□□ -0.41
GPD2-203ENST00000409674 SHROOM2Q13796 1616 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms