RNA–Protein interactions for RNA: ENST00000408968.3

IFITM1-202, Transcript of interferon induced transmembrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFITM1, Length 855 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFITM1-202ENST00000408968 NISCHQ9Y2I1 1504 aa32.64■■■□□ 2.82
IFITM1-202ENST00000408968 CCDC180Q9P1Z9 1646 aa29.29■■■□□ 2.28
IFITM1-202ENST00000408968 ABCC9O60706 1549 aa28.48■■■□□ 2.15
IFITM1-202ENST00000408968 AEBP2Q6ZN18 517 aaPredicted RBP27.79■■■□□ 2.04
IFITM1-202ENST00000408968 RB1CC1Q8TDY2 1594 aa27.55■■■□□ 2
IFITM1-202ENST00000408968 NACADO15069 1562 aa27.48■■□□□ 1.99
IFITM1-202ENST00000408968 MYO15BQ96JP2 1530 aa27.32■■□□□ 1.96
IFITM1-202ENST00000408968 ZCCHC6Q5VYS8 1495 aaKnown RBP27.2■■□□□ 1.95
IFITM1-202ENST00000408968 DCAF1Q9Y4B6 1507 aa27.13■■□□□ 1.93
IFITM1-202ENST00000408968 DCAF8L2P0C7V8 631 aa27.07■■□□□ 1.92
IFITM1-202ENST00000408968 UNC13AQ9UPW8 1703 aa26.91■■□□□ 1.9
IFITM1-202ENST00000408968 BICRAQ9NZM4 1560 aa26.59■■□□□ 1.85
IFITM1-202ENST00000408968 SHROOM4Q9ULL8 1493 aa26.55■■□□□ 1.84
IFITM1-202ENST00000408968 SCRIBQ14160 1630 aa26.52■■□□□ 1.84
IFITM1-202ENST00000408968 PABPN1Q86U42 306 aaKnown RBP eCLIP26.44■■□□□ 1.82
IFITM1-202ENST00000408968 CHIC1Q5VXU3 224 aa26.2■■□□□ 1.78
IFITM1-202ENST00000408968 DNAJC5BQ9UF47 199 aa26.04■■□□□ 1.76
IFITM1-202ENST00000408968 EIF4G1Q04637 1599 aaKnown RBP25.95■■□□□ 1.75
IFITM1-202ENST00000408968 CC2D2AQ9P2K1 1620 aa25.85■■□□□ 1.73
IFITM1-202ENST00000408968 CECR2Q9BXF3 1484 aa25.66■■□□□ 1.7
IFITM1-202ENST00000408968 SMARCA4P51532 1647 aa25.41■■□□□ 1.66
IFITM1-202ENST00000408968 BAZ1AQ9NRL2 1556 aaPredicted RBP25.39■■□□□ 1.66
IFITM1-202ENST00000408968 SMARCA2P51531 1590 aa25.32■■□□□ 1.64
IFITM1-202ENST00000408968 NCAPD3P42695 1498 aa25.26■■□□□ 1.63
IFITM1-202ENST00000408968 HMGXB3Q12766 1538 aa25.24■■□□□ 1.63
IFITM1-202ENST00000408968 ATAD2BQ9ULI0 1458 aa25.22■■□□□ 1.63
IFITM1-202ENST00000408968 PEG3Q9GZU2 1588 aa25.22■■□□□ 1.63
IFITM1-202ENST00000408968 MROH2BQ7Z745 1585 aa25.08■■□□□ 1.61
IFITM1-202ENST00000408968 BAZ1BQ9UIG0 1483 aaKnown RBP25.07■■□□□ 1.6
IFITM1-202ENST00000408968 WIZO95785 1651 aa24.85■■□□□ 1.57
IFITM1-202ENST00000408968 RSF1Q96T23 1441 aaPredicted RBP24.73■■□□□ 1.55
IFITM1-202ENST00000408968 LAMC3Q9Y6N6 1575 aa24.72■■□□□ 1.55
IFITM1-202ENST00000408968 TOP2AP11388 1531 aaKnown RBP24.66■■□□□ 1.54
IFITM1-202ENST00000408968 ERCC6Q03468 1493 aa24.66■■□□□ 1.54
IFITM1-202ENST00000408968 NESP48681 1621 aa24.57■■□□□ 1.52
IFITM1-202ENST00000408968 CUX2O14529 1486 aa24.52■■□□□ 1.52
IFITM1-202ENST00000408968 PDS5BQ9NTI5 1447 aa24.49■■□□□ 1.51
IFITM1-202ENST00000408968 CADPSQ9ULU8 1353 aa24.47■■□□□ 1.51
IFITM1-202ENST00000408968 KIF21AQ7Z4S6 1674 aa24.46■■□□□ 1.51
IFITM1-202ENST00000408968 THOC2Q8NI27 1593 aaKnown RBP24.42■■□□□ 1.5
IFITM1-202ENST00000408968 PRDM2Q13029 1718 aa24.39■■□□□ 1.5
IFITM1-202ENST00000408968 CFTRP13569 1480 aa24.34■■□□□ 1.49
IFITM1-202ENST00000408968 CEP164Q9UPV0 1460 aa24.26■■□□□ 1.47
IFITM1-202ENST00000408968 MRC2Q9UBG0 1479 aa24.25■■□□□ 1.47
IFITM1-202ENST00000408968 CCDC88BA6NC98 1476 aa24.24■■□□□ 1.47
IFITM1-202ENST00000408968 FANCD2Q9BXW9 1451 aa24.23■■□□□ 1.47
IFITM1-202ENST00000408968 WDR62O43379 1518 aa24.2■■□□□ 1.46
IFITM1-202ENST00000408968 URB2Q14146 1524 aaKnown RBP23.95■■□□□ 1.43
IFITM1-202ENST00000408968 ABCC8Q09428 1581 aa23.94■■□□□ 1.42
IFITM1-202ENST00000408968 DNMBPQ6XZF7 1577 aa23.86■■□□□ 1.41
IFITM1-202ENST00000408968 SUPT5HO00267 1087 aaKnown RBP23.86■■□□□ 1.41
IFITM1-202ENST00000408968 TOPBP1Q92547 1522 aa23.83■■□□□ 1.41
IFITM1-202ENST00000408968 IFT140Q96RY7 1462 aa23.75■■□□□ 1.39
IFITM1-202ENST00000408968 DNAJC5Q9H3Z4 198 aa23.71■■□□□ 1.39
IFITM1-202ENST00000408968 WDR97A6NE52 1622 aa23.62■■□□□ 1.37
IFITM1-202ENST00000408968 TARBP1Q13395 1621 aaKnown RBP23.62■■□□□ 1.37
IFITM1-202ENST00000408968 POLA1P09884 1462 aaPredicted RBP23.61■■□□□ 1.37
IFITM1-202ENST00000408968 EIF4G3O43432 1585 aaKnown RBP23.59■■□□□ 1.37
IFITM1-202ENST00000408968 SENP3Q9H4L4 574 aaPredicted RBP23.58■■□□□ 1.37
IFITM1-202ENST00000408968 CUX1P39880 1505 aa23.57■■□□□ 1.36
IFITM1-202ENST00000408968 FGD5Q6ZNL6 1462 aa23.53■■□□□ 1.36
IFITM1-202ENST00000408968 ZNF608Q9ULD9 1512 aaPredicted RBP23.52■■□□□ 1.36
IFITM1-202ENST00000408968 BIVM-ERCC5R4GMW8 1640 aa23.47■■□□□ 1.35
IFITM1-202ENST00000408968 SOGA1O94964 1423 aa23.46■■□□□ 1.35
IFITM1-202ENST00000408968 TOP2BQ02880 1626 aa23.43■■□□□ 1.34
IFITM1-202ENST00000408968 RAD54L2Q9Y4B4 1467 aa23.41■■□□□ 1.34
IFITM1-202ENST00000408968 WRNQ14191 1432 aaPredicted RBP eCLIP23.39■■□□□ 1.33
IFITM1-202ENST00000408968 AQRO60306 1485 aaKnown RBP eCLIP23.35■■□□□ 1.336e-16■■■■■ 35.8
IFITM1-202ENST00000408968 ABCA10Q8WWZ4 1543 aa23.34■■□□□ 1.33
IFITM1-202ENST00000408968 SYNJ1O43426 1573 aa23.34■■□□□ 1.33
IFITM1-202ENST00000408968 PBRM1Q86U86 1689 aa23.33■■□□□ 1.33
IFITM1-202ENST00000408968 CHD1O14646 1710 aa23.33■■□□□ 1.32
IFITM1-202ENST00000408968 ABCA5Q8WWZ7 1642 aa23.31■■□□□ 1.32
IFITM1-202ENST00000408968 OSCARQ8IYS5 282 aa23.31■■□□□ 1.32
IFITM1-202ENST00000408968 PHF23Q9BUL5 403 aaPredicted RBP23.31■■□□□ 1.32
IFITM1-202ENST00000408968 MAGI1Q96QZ7 1491 aaPredicted RBP23.3■■□□□ 1.32
IFITM1-202ENST00000408968 GRIN2BQ13224 1484 aa23.29■■□□□ 1.32
IFITM1-202ENST00000408968 TDRD9Q8NDG6 1382 aaKnown RBP23.27■■□□□ 1.31
IFITM1-202ENST00000408968 GAPVD1Q14C86 1478 aa23.24■■□□□ 1.31
IFITM1-202ENST00000408968 SNAPC4Q5SXM2 1469 aa23.24■■□□□ 1.31
IFITM1-202ENST00000408968 SYNJ2O15056 1496 aa23.17■■□□□ 1.3
IFITM1-202ENST00000408968 ERICH3Q5RHP9 1530 aa23.12■■□□□ 1.29
IFITM1-202ENST00000408968 ADAMTS12P58397 1594 aa23.1■■□□□ 1.29
IFITM1-202ENST00000408968 FBLN2P98095 1184 aa23.06■■□□□ 1.28
IFITM1-202ENST00000408968 RIMBP3CA6NJZ7 1639 aa23.06■■□□□ 1.28
IFITM1-202ENST00000408968 RIMBP3BA6NNM3 1639 aa23.06■■□□□ 1.28
IFITM1-202ENST00000408968 RIMBP3Q9UFD9 1639 aa23.06■■□□□ 1.28
IFITM1-202ENST00000408968 CHMP7Q8WUX9 453 aaPredicted RBP23.05■■□□□ 1.28
IFITM1-202ENST00000408968 CLASP1Q7Z460 1538 aa23.04■■□□□ 1.28
IFITM1-202ENST00000408968 ARHGEF11O15085 1522 aa23.03■■□□□ 1.28
IFITM1-202ENST00000408968 FHAD1B1AJZ9 1412 aa22.99■■□□□ 1.27
IFITM1-202ENST00000408968 GRIN2AQ12879 1464 aa22.98■■□□□ 1.27
IFITM1-202ENST00000408968 CUL7Q14999 1698 aa22.95■■□□□ 1.26
IFITM1-202ENST00000408968 KIF27Q86VH2 1401 aa22.93■■□□□ 1.26
IFITM1-202ENST00000408968 NUP160Q12769 1436 aa22.87■■□□□ 1.25
IFITM1-202ENST00000408968 CEP170Q5SW79 1584 aa22.86■■□□□ 1.25
IFITM1-202ENST00000408968 TRIM41Q8WV44 630 aa22.81■■□□□ 1.24
IFITM1-202ENST00000408968 ARAP1Q96P48 1450 aa22.79■■□□□ 1.24
IFITM1-202ENST00000408968 SHROOM2Q13796 1616 aa22.79■■□□□ 1.24
IFITM1-202ENST00000408968 RUSC2Q8N2Y8 1516 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms