RNA–Protein interactions for RNA: ENST00000408938.2

FAM200A-201, Transcript of family with sequence similarity 200 member A, humanhuman

APPRIS ALT2 TSL 2

Gene FAM200A, Length 1,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM200A-201ENST00000408938 NISCHQ9Y2I1 1504 aa18.8■□□□□ 0.6
FAM200A-201ENST00000408938 AEBP2Q6ZN18 517 aaPredicted RBP18.15■□□□□ 0.5
FAM200A-201ENST00000408938 CHIC1Q5VXU3 224 aa17.25■□□□□ 0.35
FAM200A-201ENST00000408938 CCDC180Q9P1Z9 1646 aa16.97■□□□□ 0.31
FAM200A-201ENST00000408938 ABCC9O60706 1549 aa16.91■□□□□ 0.3
FAM200A-201ENST00000408938 RB1CC1Q8TDY2 1594 aa16.12■□□□□ 0.17
FAM200A-201ENST00000408938 NACADO15069 1562 aa16.02■□□□□ 0.16
FAM200A-201ENST00000408938 DNAJC5BQ9UF47 199 aa15.98■□□□□ 0.15
FAM200A-201ENST00000408938 MYO15BQ96JP2 1530 aa15.85■□□□□ 0.13
FAM200A-201ENST00000408938 SENP3Q9H4L4 574 aaPredicted RBP15.84■□□□□ 0.13
FAM200A-201ENST00000408938 UNC13AQ9UPW8 1703 aa15.84■□□□□ 0.13
FAM200A-201ENST00000408938 BICRAQ9NZM4 1560 aa15.74■□□□□ 0.11
FAM200A-201ENST00000408938 PABPN1Q86U42 306 aaKnown RBP eCLIP15.66■□□□□ 0.1
FAM200A-201ENST00000408938 DCAF8L2P0C7V8 631 aa15.6■□□□□ 0.09
FAM200A-201ENST00000408938 DCAF1Q9Y4B6 1507 aa15.6■□□□□ 0.09
FAM200A-201ENST00000408938 ZCCHC6Q5VYS8 1495 aaKnown RBP15.6■□□□□ 0.09
FAM200A-201ENST00000408938 SHROOM4Q9ULL8 1493 aa15.53■□□□□ 0.08
FAM200A-201ENST00000408938 PHF23Q9BUL5 403 aaPredicted RBP15.42■□□□□ 0.06
FAM200A-201ENST00000408938 SCRIBQ14160 1630 aa15.34■□□□□ 0.05
FAM200A-201ENST00000408938 CC2D2AQ9P2K1 1620 aa15.34■□□□□ 0.05
FAM200A-201ENST00000408938 EIF4G1Q04637 1599 aaKnown RBP15.3■□□□□ 0.04
FAM200A-201ENST00000408938 CECR2Q9BXF3 1484 aa15.26■□□□□ 0.03
FAM200A-201ENST00000408938 DNAJC5Q9H3Z4 198 aa14.96□□□□□ -0.02
FAM200A-201ENST00000408938 NCAPD3P42695 1498 aa14.79□□□□□ -0.04
FAM200A-201ENST00000408938 ATAD2BQ9ULI0 1458 aa14.72□□□□□ -0.05
FAM200A-201ENST00000408938 HMGXB3Q12766 1538 aa14.7□□□□□ -0.06
FAM200A-201ENST00000408938 SMARCA4P51532 1647 aa14.69□□□□□ -0.06
FAM200A-201ENST00000408938 CUX2O14529 1486 aa14.69□□□□□ -0.06
FAM200A-201ENST00000408938 SMARCA2P51531 1590 aa14.66□□□□□ -0.06
FAM200A-201ENST00000408938 PEG3Q9GZU2 1588 aa14.63□□□□□ -0.07
FAM200A-201ENST00000408938 FOXD1Q16676 465 aa14.62□□□□□ -0.07
FAM200A-201ENST00000408938 BAZ1AQ9NRL2 1556 aaPredicted RBP14.58□□□□□ -0.07
FAM200A-201ENST00000408938 ERCC6Q03468 1493 aa14.55□□□□□ -0.08
FAM200A-201ENST00000408938 NESP48681 1621 aa14.54□□□□□ -0.08
FAM200A-201ENST00000408938 BAZ1BQ9UIG0 1483 aaKnown RBP14.51□□□□□ -0.09
FAM200A-201ENST00000408938 THOC2Q8NI27 1593 aaKnown RBP14.5□□□□□ -0.09
FAM200A-201ENST00000408938 MROH2BQ7Z745 1585 aa14.47□□□□□ -0.09
FAM200A-201ENST00000408938 LAMC3Q9Y6N6 1575 aa14.47□□□□□ -0.09
FAM200A-201ENST00000408938 KIF21AQ7Z4S6 1674 aa14.39□□□□□ -0.11
FAM200A-201ENST00000408938 POTEDQ86YR6 584 aa14.37□□□□□ -0.11
FAM200A-201ENST00000408938 PDS5BQ9NTI5 1447 aa14.31□□□□□ -0.12
FAM200A-201ENST00000408938 CADPSQ9ULU8 1353 aa14.29□□□□□ -0.12
FAM200A-201ENST00000408938 WIZO95785 1651 aa14.28□□□□□ -0.12
FAM200A-201ENST00000408938 WDR62O43379 1518 aa14.26□□□□□ -0.13
FAM200A-201ENST00000408938 MRC2Q9UBG0 1479 aa14.23□□□□□ -0.13
FAM200A-201ENST00000408938 CFTRP13569 1480 aa14.15□□□□□ -0.14
FAM200A-201ENST00000408938 CEP164Q9UPV0 1460 aa14.13□□□□□ -0.15
FAM200A-201ENST00000408938 RSF1Q96T23 1441 aaPredicted RBP14.13□□□□□ -0.15
FAM200A-201ENST00000408938 FANCD2Q9BXW9 1451 aa14.12□□□□□ -0.15
FAM200A-201ENST00000408938 TOP2AP11388 1531 aaKnown RBP14.12□□□□□ -0.15
FAM200A-201ENST00000408938 MSH5O43196 834 aa14.11□□□□□ -0.15
FAM200A-201ENST00000408938 PRDM2Q13029 1718 aa14.05□□□□□ -0.16
FAM200A-201ENST00000408938 URB2Q14146 1524 aaKnown RBP14.05□□□□□ -0.16
FAM200A-201ENST00000408938 TRIM41Q8WV44 630 aa14.05□□□□□ -0.16
FAM200A-201ENST00000408938 CCDC88BA6NC98 1476 aa13.92□□□□□ -0.18
FAM200A-201ENST00000408938 OSCARQ8IYS5 282 aa13.92□□□□□ -0.18
FAM200A-201ENST00000408938 IFT140Q96RY7 1462 aa13.87□□□□□ -0.19
FAM200A-201ENST00000408938 TOPBP1Q92547 1522 aa13.87□□□□□ -0.19
FAM200A-201ENST00000408938 ZNF608Q9ULD9 1512 aaPredicted RBP13.87□□□□□ -0.19
FAM200A-201ENST00000408938 DNMBPQ6XZF7 1577 aa13.82□□□□□ -0.2
FAM200A-201ENST00000408938 RIMBP3CA6NJZ7 1639 aa13.81□□□□□ -0.2
FAM200A-201ENST00000408938 RIMBP3BA6NNM3 1639 aa13.81□□□□□ -0.2
FAM200A-201ENST00000408938 RIMBP3Q9UFD9 1639 aa13.81□□□□□ -0.2
FAM200A-201ENST00000408938 EIF4G3O43432 1585 aaKnown RBP13.81□□□□□ -0.2
FAM200A-201ENST00000408938 ABCC8Q09428 1581 aa13.81□□□□□ -0.2
FAM200A-201ENST00000408938 TARBP1Q13395 1621 aaKnown RBP13.8□□□□□ -0.2
FAM200A-201ENST00000408938 ARHGEF11O15085 1522 aa13.76□□□□□ -0.21
FAM200A-201ENST00000408938 POLA1P09884 1462 aaPredicted RBP13.72□□□□□ -0.21
FAM200A-201ENST00000408938 CHD1O14646 1710 aa13.72□□□□□ -0.21
FAM200A-201ENST00000408938 AQRO60306 1485 aaKnown RBP eCLIP13.68□□□□□ -0.22
FAM200A-201ENST00000408938 WDR97A6NE52 1622 aa13.67□□□□□ -0.22
FAM200A-201ENST00000408938 RAD54L2Q9Y4B4 1467 aa13.63□□□□□ -0.23
FAM200A-201ENST00000408938 ARAP1Q96P48 1450 aa13.63□□□□□ -0.23
FAM200A-201ENST00000408938 CUX1P39880 1505 aa13.61□□□□□ -0.23
FAM200A-201ENST00000408938 CLASP1Q7Z460 1538 aa13.61□□□□□ -0.23
FAM200A-201ENST00000408938 PIAS4Q8N2W9 510 aaPredicted RBP13.6□□□□□ -0.23
FAM200A-201ENST00000408938 FGD5Q6ZNL6 1462 aa13.6□□□□□ -0.23
FAM200A-201ENST00000408938 SOGA1O94964 1423 aa13.58□□□□□ -0.24
FAM200A-201ENST00000408938 SNAPC4Q5SXM2 1469 aa13.56□□□□□ -0.24
FAM200A-201ENST00000408938 TDRD9Q8NDG6 1382 aaKnown RBP13.56□□□□□ -0.24
FAM200A-201ENST00000408938 MAGI1Q96QZ7 1491 aaPredicted RBP13.56□□□□□ -0.24
FAM200A-201ENST00000408938 CYB5RLQ6IPT4 315 aa13.54□□□□□ -0.24
FAM200A-201ENST00000408938 GRIN2BQ13224 1484 aa13.52□□□□□ -0.25
FAM200A-201ENST00000408938 PBRM1Q86U86 1689 aa13.51□□□□□ -0.25
FAM200A-201ENST00000408938 ABCA5Q8WWZ7 1642 aa13.51□□□□□ -0.25
FAM200A-201ENST00000408938 SYNJ1O43426 1573 aa13.51□□□□□ -0.25
FAM200A-201ENST00000408938 SYNJ2O15056 1496 aa13.5□□□□□ -0.25
FAM200A-201ENST00000408938 ABCA10Q8WWZ4 1543 aa13.48□□□□□ -0.25
FAM200A-201ENST00000408938 TRHP20396 242 aaPredicted RBP13.47□□□□□ -0.25
FAM200A-201ENST00000408938 FBLN2P98095 1184 aa13.45□□□□□ -0.26
FAM200A-201ENST00000408938 GAPVD1Q14C86 1478 aa13.45□□□□□ -0.26
FAM200A-201ENST00000408938 PLPPR3Q6T4P5 718 aa13.43□□□□□ -0.26
FAM200A-201ENST00000408938 BIVM-ERCC5R4GMW8 1640 aa13.4□□□□□ -0.26
FAM200A-201ENST00000408938 CHMP7Q8WUX9 453 aaPredicted RBP13.4□□□□□ -0.26
FAM200A-201ENST00000408938 ADAMTS12P58397 1594 aa13.38□□□□□ -0.27
FAM200A-201ENST00000408938 TOP2BQ02880 1626 aa13.38□□□□□ -0.27
FAM200A-201ENST00000408938 NUP160Q12769 1436 aa13.37□□□□□ -0.27
FAM200A-201ENST00000408938 GRIN2AQ12879 1464 aa13.36□□□□□ -0.27
FAM200A-201ENST00000408938 SHROOM2Q13796 1616 aa13.36□□□□□ -0.27
FAM200A-201ENST00000408938 CEP170Q5SW79 1584 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms