RNA–Protein interactions for RNA: ENST00000396007.6

SOX5-203, Transcript of SRY-box 5, humanhuman

TSL 1 (best) BASIC

Gene SOX5, Length 1,379 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX5-203ENST00000396007 NISCHQ9Y2I1 1504 aa22.41■■□□□ 1.18
SOX5-203ENST00000396007 ABCC9O60706 1549 aa20.3■□□□□ 0.84
SOX5-203ENST00000396007 CCDC180Q9P1Z9 1646 aa20.24■□□□□ 0.83
SOX5-203ENST00000396007 DNAJC5BQ9UF47 199 aa19.28■□□□□ 0.68
SOX5-203ENST00000396007 RB1CC1Q8TDY2 1594 aa19.22■□□□□ 0.67
SOX5-203ENST00000396007 NACADO15069 1562 aa19.05■□□□□ 0.64
SOX5-203ENST00000396007 UNC13AQ9UPW8 1703 aa18.9■□□□□ 0.62
SOX5-203ENST00000396007 DCAF8L2P0C7V8 631 aa18.9■□□□□ 0.62
SOX5-203ENST00000396007 PABPN1Q86U42 306 aaKnown RBP eCLIP18.88■□□□□ 0.61
SOX5-203ENST00000396007 MYO15BQ96JP2 1530 aa18.78■□□□□ 0.6
SOX5-203ENST00000396007 BICRAQ9NZM4 1560 aa18.71■□□□□ 0.59
SOX5-203ENST00000396007 ZCCHC6Q5VYS8 1495 aaKnown RBP18.61■□□□□ 0.57
SOX5-203ENST00000396007 DCAF1Q9Y4B6 1507 aa18.54■□□□□ 0.56
SOX5-203ENST00000396007 AEBP2Q6ZN18 517 aaPredicted RBP18.48■□□□□ 0.55
SOX5-203ENST00000396007 SHROOM4Q9ULL8 1493 aa18.41■□□□□ 0.54
SOX5-203ENST00000396007 SCRIBQ14160 1630 aa18.39■□□□□ 0.53
SOX5-203ENST00000396007 CC2D2AQ9P2K1 1620 aa18.34■□□□□ 0.53
SOX5-203ENST00000396007 CECR2Q9BXF3 1484 aa18.3■□□□□ 0.52
SOX5-203ENST00000396007 EIF4G1Q04637 1599 aaKnown RBP18.24■□□□□ 0.51
SOX5-203ENST00000396007 CHIC1Q5VXU3 224 aa18.1■□□□□ 0.49
SOX5-203ENST00000396007 DNAJC5Q9H3Z4 198 aa17.81■□□□□ 0.44
SOX5-203ENST00000396007 NCAPD3P42695 1498 aa17.58■□□□□ 0.4
SOX5-203ENST00000396007 CUX2O14529 1486 aa17.55■□□□□ 0.4
SOX5-203ENST00000396007 SMARCA4P51532 1647 aa17.54■□□□□ 0.4
SOX5-203ENST00000396007 ERCC6Q03468 1493 aa17.51■□□□□ 0.39
SOX5-203ENST00000396007 ATAD2BQ9ULI0 1458 aa17.51■□□□□ 0.39
SOX5-203ENST00000396007 HMGXB3Q12766 1538 aa17.49■□□□□ 0.39
SOX5-203ENST00000396007 SMARCA2P51531 1590 aa17.48■□□□□ 0.39
SOX5-203ENST00000396007 BAZ1AQ9NRL2 1556 aaPredicted RBP17.42■□□□□ 0.38
SOX5-203ENST00000396007 NESP48681 1621 aa17.4■□□□□ 0.38
SOX5-203ENST00000396007 PEG3Q9GZU2 1588 aa17.38■□□□□ 0.37
SOX5-203ENST00000396007 BAZ1BQ9UIG0 1483 aaKnown RBP17.34■□□□□ 0.37
SOX5-203ENST00000396007 MROH2BQ7Z745 1585 aa17.27■□□□□ 0.36
SOX5-203ENST00000396007 THOC2Q8NI27 1593 aaKnown RBP17.26■□□□□ 0.35
SOX5-203ENST00000396007 LAMC3Q9Y6N6 1575 aa17.22■□□□□ 0.35
SOX5-203ENST00000396007 KIF21AQ7Z4S6 1674 aa17.19■□□□□ 0.34
SOX5-203ENST00000396007 WIZO95785 1651 aa17.1■□□□□ 0.33
SOX5-203ENST00000396007 PDS5BQ9NTI5 1447 aa17.1■□□□□ 0.33
SOX5-203ENST00000396007 CADPSQ9ULU8 1353 aa17.03■□□□□ 0.32
SOX5-203ENST00000396007 MRC2Q9UBG0 1479 aa16.98■□□□□ 0.31
SOX5-203ENST00000396007 WDR62O43379 1518 aa16.96■□□□□ 0.31
SOX5-203ENST00000396007 TRIM41Q8WV44 630 aa16.94■□□□□ 0.3
SOX5-203ENST00000396007 TOP2AP11388 1531 aaKnown RBP16.89■□□□□ 0.29
SOX5-203ENST00000396007 CEP164Q9UPV0 1460 aa16.86■□□□□ 0.29
SOX5-203ENST00000396007 RSF1Q96T23 1441 aaPredicted RBP16.85■□□□□ 0.29
SOX5-203ENST00000396007 FANCD2Q9BXW9 1451 aa16.84■□□□□ 0.29
SOX5-203ENST00000396007 PRDM2Q13029 1718 aa16.84■□□□□ 0.29
SOX5-203ENST00000396007 CFTRP13569 1480 aa16.81■□□□□ 0.28
SOX5-203ENST00000396007 URB2Q14146 1524 aaKnown RBP16.74■□□□□ 0.27
SOX5-203ENST00000396007 OSCARQ8IYS5 282 aa16.72■□□□□ 0.27
SOX5-203ENST00000396007 CCDC88BA6NC98 1476 aa16.62■□□□□ 0.25
SOX5-203ENST00000396007 RIMBP3CA6NJZ7 1639 aa16.57■□□□□ 0.24
SOX5-203ENST00000396007 RIMBP3BA6NNM3 1639 aa16.57■□□□□ 0.24
SOX5-203ENST00000396007 RIMBP3Q9UFD9 1639 aa16.57■□□□□ 0.24
SOX5-203ENST00000396007 ZNF608Q9ULD9 1512 aaPredicted RBP16.57■□□□□ 0.24
SOX5-203ENST00000396007 IFT140Q96RY7 1462 aa16.54■□□□□ 0.24
SOX5-203ENST00000396007 TOPBP1Q92547 1522 aa16.53■□□□□ 0.24
SOX5-203ENST00000396007 EIF4G3O43432 1585 aaKnown RBP16.5■□□□□ 0.23
SOX5-203ENST00000396007 DNMBPQ6XZF7 1577 aa16.5■□□□□ 0.23
SOX5-203ENST00000396007 ARHGEF11O15085 1522 aa16.47■□□□□ 0.23
SOX5-203ENST00000396007 ABCC8Q09428 1581 aa16.45■□□□□ 0.22
SOX5-203ENST00000396007 TARBP1Q13395 1621 aaKnown RBP16.43■□□□□ 0.22
SOX5-203ENST00000396007 CHD1O14646 1710 aa16.41■□□□□ 0.22
SOX5-203ENST00000396007 AQRO60306 1485 aaKnown RBP eCLIP16.38■□□□□ 0.219e-10■■■□□ 15.5
SOX5-203ENST00000396007 CYB5RLQ6IPT4 315 aa16.37■□□□□ 0.21
SOX5-203ENST00000396007 POLA1P09884 1462 aaPredicted RBP16.35■□□□□ 0.21
SOX5-203ENST00000396007 ARAP1Q96P48 1450 aa16.3■□□□□ 0.2
SOX5-203ENST00000396007 FBLN2P98095 1184 aa16.29■□□□□ 0.2
SOX5-203ENST00000396007 RAD54L2Q9Y4B4 1467 aa16.29■□□□□ 0.2
SOX5-203ENST00000396007 WDR97A6NE52 1622 aa16.28■□□□□ 0.2
SOX5-203ENST00000396007 FGD5Q6ZNL6 1462 aa16.25■□□□□ 0.19
SOX5-203ENST00000396007 SOGA1O94964 1423 aa16.24■□□□□ 0.19
SOX5-203ENST00000396007 TDRD9Q8NDG6 1382 aaKnown RBP16.24■□□□□ 0.19
SOX5-203ENST00000396007 CUX1P39880 1505 aa16.24■□□□□ 0.19
SOX5-203ENST00000396007 TRHP20396 242 aaPredicted RBP16.24■□□□□ 0.19
SOX5-203ENST00000396007 SNAPC4Q5SXM2 1469 aa16.2■□□□□ 0.18
SOX5-203ENST00000396007 PBRM1Q86U86 1689 aa16.19■□□□□ 0.18
SOX5-203ENST00000396007 CLASP1Q7Z460 1538 aa16.19■□□□□ 0.18
SOX5-203ENST00000396007 MAGI1Q96QZ7 1491 aaPredicted RBP16.14■□□□□ 0.17
SOX5-203ENST00000396007 CHMP7Q8WUX9 453 aaPredicted RBP16.13■□□□□ 0.17
SOX5-203ENST00000396007 SYNJ1O43426 1573 aa16.13■□□□□ 0.17
SOX5-203ENST00000396007 ABCA5Q8WWZ7 1642 aa16.12■□□□□ 0.17
SOX5-203ENST00000396007 GRIN2BQ13224 1484 aa16.11■□□□□ 0.17
SOX5-203ENST00000396007 SYNJ2O15056 1496 aa16.09■□□□□ 0.17
SOX5-203ENST00000396007 ABCA10Q8WWZ4 1543 aa16.06■□□□□ 0.16
SOX5-203ENST00000396007 BIVM-ERCC5R4GMW8 1640 aa16.04■□□□□ 0.16
SOX5-203ENST00000396007 GAPVD1Q14C86 1478 aa16.04■□□□□ 0.16
SOX5-203ENST00000396007 PHF23Q9BUL5 403 aaPredicted RBP16■□□□□ 0.15
SOX5-203ENST00000396007 ADAMTS12P58397 1594 aa16■□□□□ 0.15
SOX5-203ENST00000396007 TOP2BQ02880 1626 aa15.99■□□□□ 0.15
SOX5-203ENST00000396007 SUPT5HO00267 1087 aaKnown RBP15.97■□□□□ 0.15
SOX5-203ENST00000396007 ERCC6L2Q5T890 1561 aa15.95■□□□□ 0.14
SOX5-203ENST00000396007 GRIN2AQ12879 1464 aa15.93■□□□□ 0.14
SOX5-203ENST00000396007 WRNQ14191 1432 aaPredicted RBP eCLIP15.92■□□□□ 0.14
SOX5-203ENST00000396007 CEP170Q5SW79 1584 aa15.92■□□□□ 0.14
SOX5-203ENST00000396007 SHROOM2Q13796 1616 aa15.88■□□□□ 0.13
SOX5-203ENST00000396007 NUP160Q12769 1436 aa15.87■□□□□ 0.13
SOX5-203ENST00000396007 ERICH3Q5RHP9 1530 aa15.87■□□□□ 0.13
SOX5-203ENST00000396007 FHAD1B1AJZ9 1412 aa15.83■□□□□ 0.12
SOX5-203ENST00000396007 RUSC2Q8N2Y8 1516 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms