RNA–Protein interactions for RNA: ENST00000391998.3

TPM3P6-201, Transcript of tropomyosin 3 pseudogene 6, humanhuman

BASIC

Gene TPM3P6, Length 742 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P6-201ENST00000391998 NISCHQ9Y2I1 1504 aa24.09■■□□□ 1.45
TPM3P6-201ENST00000391998 ABCC9O60706 1549 aa21.65■■□□□ 1.06
TPM3P6-201ENST00000391998 CCDC180Q9P1Z9 1646 aa21.6■■□□□ 1.05
TPM3P6-201ENST00000391998 RB1CC1Q8TDY2 1594 aa20.69■□□□□ 0.9
TPM3P6-201ENST00000391998 NACADO15069 1562 aa20.58■□□□□ 0.88
TPM3P6-201ENST00000391998 DNAJC5BQ9UF47 199 aa20.41■□□□□ 0.86
TPM3P6-201ENST00000391998 MYO15BQ96JP2 1530 aa20.39■□□□□ 0.85
TPM3P6-201ENST00000391998 DCAF8L2P0C7V8 631 aa20.37■□□□□ 0.85
TPM3P6-201ENST00000391998 PABPN1Q86U42 306 aaKnown RBP eCLIP20.18■□□□□ 0.82
TPM3P6-201ENST00000391998 DCAF1Q9Y4B6 1507 aa20.02■□□□□ 0.8
TPM3P6-201ENST00000391998 SHROOM4Q9ULL8 1493 aa20.02■□□□□ 0.8
TPM3P6-201ENST00000391998 ZCCHC6Q5VYS8 1495 aaKnown RBP19.93■□□□□ 0.78
TPM3P6-201ENST00000391998 BICRAQ9NZM4 1560 aa19.92■□□□□ 0.78
TPM3P6-201ENST00000391998 UNC13AQ9UPW8 1703 aa19.82■□□□□ 0.76
TPM3P6-201ENST00000391998 CECR2Q9BXF3 1484 aa19.63■□□□□ 0.73
TPM3P6-201ENST00000391998 SCRIBQ14160 1630 aa19.54■□□□□ 0.72
TPM3P6-201ENST00000391998 CC2D2AQ9P2K1 1620 aa19.54■□□□□ 0.72
TPM3P6-201ENST00000391998 EIF4G1Q04637 1599 aaKnown RBP19.53■□□□□ 0.72
TPM3P6-201ENST00000391998 NCAPD3P42695 1498 aa19.04■□□□□ 0.64
TPM3P6-201ENST00000391998 DNAJC5Q9H3Z4 198 aa19.03■□□□□ 0.64
TPM3P6-201ENST00000391998 CUX2O14529 1486 aa18.91■□□□□ 0.62
TPM3P6-201ENST00000391998 ATAD2BQ9ULI0 1458 aa18.88■□□□□ 0.61
TPM3P6-201ENST00000391998 SMARCA2P51531 1590 aa18.86■□□□□ 0.61
TPM3P6-201ENST00000391998 ERCC6Q03468 1493 aa18.83■□□□□ 0.6
TPM3P6-201ENST00000391998 HMGXB3Q12766 1538 aa18.82■□□□□ 0.6
TPM3P6-201ENST00000391998 BAZ1AQ9NRL2 1556 aaPredicted RBP18.75■□□□□ 0.59
TPM3P6-201ENST00000391998 SMARCA4P51532 1647 aa18.71■□□□□ 0.59
TPM3P6-201ENST00000391998 BAZ1BQ9UIG0 1483 aaKnown RBP18.69■□□□□ 0.58
TPM3P6-201ENST00000391998 PEG3Q9GZU2 1588 aa18.66■□□□□ 0.58
TPM3P6-201ENST00000391998 AEBP2Q6ZN18 517 aaPredicted RBP18.58■□□□□ 0.56
TPM3P6-201ENST00000391998 PDS5BQ9NTI5 1447 aa18.57■□□□□ 0.56
TPM3P6-201ENST00000391998 LAMC3Q9Y6N6 1575 aa18.55■□□□□ 0.56
TPM3P6-201ENST00000391998 NESP48681 1621 aa18.51■□□□□ 0.55
TPM3P6-201ENST00000391998 CADPSQ9ULU8 1353 aa18.46■□□□□ 0.55
TPM3P6-201ENST00000391998 MROH2BQ7Z745 1585 aa18.45■□□□□ 0.54
TPM3P6-201ENST00000391998 THOC2Q8NI27 1593 aaKnown RBP18.35■□□□□ 0.53
TPM3P6-201ENST00000391998 MRC2Q9UBG0 1479 aa18.29■□□□□ 0.52
TPM3P6-201ENST00000391998 WDR62O43379 1518 aa18.21■□□□□ 0.51
TPM3P6-201ENST00000391998 CFTRP13569 1480 aa18.2■□□□□ 0.5
TPM3P6-201ENST00000391998 CEP164Q9UPV0 1460 aa18.2■□□□□ 0.5
TPM3P6-201ENST00000391998 KIF21AQ7Z4S6 1674 aa18.15■□□□□ 0.5
TPM3P6-201ENST00000391998 FANCD2Q9BXW9 1451 aa18.15■□□□□ 0.5
TPM3P6-201ENST00000391998 RSF1Q96T23 1441 aaPredicted RBP18.15■□□□□ 0.5
TPM3P6-201ENST00000391998 WIZO95785 1651 aa18.12■□□□□ 0.49
TPM3P6-201ENST00000391998 OSCARQ8IYS5 282 aa18.1■□□□□ 0.49
TPM3P6-201ENST00000391998 TOP2AP11388 1531 aaKnown RBP18.06■□□□□ 0.48
TPM3P6-201ENST00000391998 TRIM41Q8WV44 630 aa17.99■□□□□ 0.47
TPM3P6-201ENST00000391998 ABCC8Q09428 1581 aa17.92■□□□□ 0.46
TPM3P6-201ENST00000391998 URB2Q14146 1524 aaKnown RBP17.92■□□□□ 0.46
TPM3P6-201ENST00000391998 IFT140Q96RY7 1462 aa17.9■□□□□ 0.46
TPM3P6-201ENST00000391998 CCDC88BA6NC98 1476 aa17.86■□□□□ 0.45
TPM3P6-201ENST00000391998 TOPBP1Q92547 1522 aa17.76■□□□□ 0.43
TPM3P6-201ENST00000391998 ZNF608Q9ULD9 1512 aaPredicted RBP17.7■□□□□ 0.42
TPM3P6-201ENST00000391998 PRDM2Q13029 1718 aa17.69■□□□□ 0.42
TPM3P6-201ENST00000391998 DNMBPQ6XZF7 1577 aa17.69■□□□□ 0.42
TPM3P6-201ENST00000391998 ARHGEF11O15085 1522 aa17.61■□□□□ 0.41
TPM3P6-201ENST00000391998 AQRO60306 1485 aaKnown RBP eCLIP17.58■□□□□ 0.41
TPM3P6-201ENST00000391998 POLA1P09884 1462 aaPredicted RBP17.58■□□□□ 0.41
TPM3P6-201ENST00000391998 CHIC1Q5VXU3 224 aa17.58■□□□□ 0.4
TPM3P6-201ENST00000391998 SOGA1O94964 1423 aa17.57■□□□□ 0.4
TPM3P6-201ENST00000391998 CYB5RLQ6IPT4 315 aa17.56■□□□□ 0.4
TPM3P6-201ENST00000391998 WDR97A6NE52 1622 aa17.56■□□□□ 0.4
TPM3P6-201ENST00000391998 RIMBP3CA6NJZ7 1639 aa17.56■□□□□ 0.4
TPM3P6-201ENST00000391998 RIMBP3BA6NNM3 1639 aa17.56■□□□□ 0.4
TPM3P6-201ENST00000391998 RIMBP3Q9UFD9 1639 aa17.56■□□□□ 0.4
TPM3P6-201ENST00000391998 EIF4G3O43432 1585 aaKnown RBP17.56■□□□□ 0.4
TPM3P6-201ENST00000391998 FBLN2P98095 1184 aa17.55■□□□□ 0.4
TPM3P6-201ENST00000391998 TARBP1Q13395 1621 aaKnown RBP17.53■□□□□ 0.4
TPM3P6-201ENST00000391998 CHMP7Q8WUX9 453 aaPredicted RBP17.51■□□□□ 0.39
TPM3P6-201ENST00000391998 TDRD9Q8NDG6 1382 aaKnown RBP17.49■□□□□ 0.39
TPM3P6-201ENST00000391998 MAGI1Q96QZ7 1491 aaPredicted RBP17.48■□□□□ 0.39
TPM3P6-201ENST00000391998 GRIN2BQ13224 1484 aa17.45■□□□□ 0.38
TPM3P6-201ENST00000391998 RAD54L2Q9Y4B4 1467 aa17.44■□□□□ 0.38
TPM3P6-201ENST00000391998 FGD5Q6ZNL6 1462 aa17.43■□□□□ 0.38
TPM3P6-201ENST00000391998 ARAP1Q96P48 1450 aa17.4■□□□□ 0.38
TPM3P6-201ENST00000391998 TRHP20396 242 aaPredicted RBP17.4■□□□□ 0.38
TPM3P6-201ENST00000391998 SYNJ2O15056 1496 aa17.39■□□□□ 0.37
TPM3P6-201ENST00000391998 SNAPC4Q5SXM2 1469 aa17.39■□□□□ 0.37
TPM3P6-201ENST00000391998 SYNJ1O43426 1573 aa17.37■□□□□ 0.37
TPM3P6-201ENST00000391998 CUX1P39880 1505 aa17.35■□□□□ 0.37
TPM3P6-201ENST00000391998 GAPVD1Q14C86 1478 aa17.33■□□□□ 0.37
TPM3P6-201ENST00000391998 CHD1O14646 1710 aa17.32■□□□□ 0.36
TPM3P6-201ENST00000391998 CLASP1Q7Z460 1538 aa17.31■□□□□ 0.36
TPM3P6-201ENST00000391998 ABCA10Q8WWZ4 1543 aa17.31■□□□□ 0.36
TPM3P6-201ENST00000391998 WRNQ14191 1432 aaPredicted RBP eCLIP17.3■□□□□ 0.36
TPM3P6-201ENST00000391998 SUPT5HO00267 1087 aaKnown RBP17.21■□□□□ 0.35
TPM3P6-201ENST00000391998 FHAD1B1AJZ9 1412 aa17.17■□□□□ 0.34
TPM3P6-201ENST00000391998 NUP160Q12769 1436 aa17.16■□□□□ 0.34
TPM3P6-201ENST00000391998 GRIN2AQ12879 1464 aa17.16■□□□□ 0.34
TPM3P6-201ENST00000391998 ABCA5Q8WWZ7 1642 aa17.15■□□□□ 0.34
TPM3P6-201ENST00000391998 ERICH3Q5RHP9 1530 aa17.11■□□□□ 0.33
TPM3P6-201ENST00000391998 TOP2BQ02880 1626 aa17.09■□□□□ 0.33
TPM3P6-201ENST00000391998 PBRM1Q86U86 1689 aa17.07■□□□□ 0.32
TPM3P6-201ENST00000391998 ADAMTS12P58397 1594 aa17.04■□□□□ 0.32
TPM3P6-201ENST00000391998 JPH4Q96JJ6 628 aa17.04■□□□□ 0.32
TPM3P6-201ENST00000391998 BIVM-ERCC5R4GMW8 1640 aa17.02■□□□□ 0.31
TPM3P6-201ENST00000391998 NPM1P06748 294 aaKnown RBP eCLIP17■□□□□ 0.31
TPM3P6-201ENST00000391998 CEP170Q5SW79 1584 aa17■□□□□ 0.31
TPM3P6-201ENST00000391998 PRG4Q92954 1404 aaPredicted RBP16.97■□□□□ 0.31
TPM3P6-201ENST00000391998 SHROOM2Q13796 1616 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms