RNA–Protein interactions for RNA: ENST00000391839.6

COX20-202, Transcript of cytochrome c oxidase assembly factor COX20, humanhuman

TSL 1 (best)

Gene COX20, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX20-202ENST00000391839 NISCHQ9Y2I1 1504 aa36.86■■■■□ 3.49
COX20-202ENST00000391839 AEBP2Q6ZN18 517 aaPredicted RBP33.87■■■■□ 3.01
COX20-202ENST00000391839 ABCC9O60706 1549 aa33.4■■■□□ 2.94
COX20-202ENST00000391839 CCDC180Q9P1Z9 1646 aa33.22■■■□□ 2.91
COX20-202ENST00000391839 CHIC1Q5VXU3 224 aa32.7■■■□□ 2.83
COX20-202ENST00000391839 RB1CC1Q8TDY2 1594 aa31.68■■■□□ 2.66
COX20-202ENST00000391839 DNAJC5BQ9UF47 199 aa31.43■■■□□ 2.62
COX20-202ENST00000391839 NACADO15069 1562 aa31.39■■■□□ 2.62
COX20-202ENST00000391839 DCAF8L2P0C7V8 631 aa31.19■■■□□ 2.58
COX20-202ENST00000391839 UNC13AQ9UPW8 1703 aa31.07■■■□□ 2.56
COX20-202ENST00000391839 PABPN1Q86U42 306 aaKnown RBP eCLIP31.03■■■□□ 2.56
COX20-202ENST00000391839 MYO15BQ96JP2 1530 aa30.85■■■□□ 2.53
COX20-202ENST00000391839 BICRAQ9NZM4 1560 aa30.79■■■□□ 2.52
COX20-202ENST00000391839 ZCCHC6Q5VYS8 1495 aaKnown RBP30.54■■■□□ 2.48
COX20-202ENST00000391839 DCAF1Q9Y4B6 1507 aa30.4■■■□□ 2.46
COX20-202ENST00000391839 SCRIBQ14160 1630 aa30.31■■■□□ 2.44
COX20-202ENST00000391839 SHROOM4Q9ULL8 1493 aa30.29■■■□□ 2.44
COX20-202ENST00000391839 CC2D2AQ9P2K1 1620 aa30.17■■■□□ 2.42
COX20-202ENST00000391839 CECR2Q9BXF3 1484 aa30.08■■■□□ 2.41
COX20-202ENST00000391839 EIF4G1Q04637 1599 aaKnown RBP30.05■■■□□ 2.4
COX20-202ENST00000391839 DNAJC5Q9H3Z4 198 aa28.95■■■□□ 2.22
COX20-202ENST00000391839 NCAPD3P42695 1498 aa28.94■■■□□ 2.22
COX20-202ENST00000391839 ATAD2BQ9ULI0 1458 aa28.87■■■□□ 2.21
COX20-202ENST00000391839 PHF23Q9BUL5 403 aaPredicted RBP28.87■■■□□ 2.21
COX20-202ENST00000391839 ERCC6Q03468 1493 aa28.85■■■□□ 2.21
COX20-202ENST00000391839 SMARCA4P51532 1647 aa28.85■■■□□ 2.21
COX20-202ENST00000391839 CUX2O14529 1486 aa28.81■■■□□ 2.2
COX20-202ENST00000391839 SMARCA2P51531 1590 aa28.79■■■□□ 2.2
COX20-202ENST00000391839 HMGXB3Q12766 1538 aa28.78■■■□□ 2.2
COX20-202ENST00000391839 NESP48681 1621 aa28.65■■■□□ 2.18
COX20-202ENST00000391839 BAZ1AQ9NRL2 1556 aaPredicted RBP28.64■■■□□ 2.18
COX20-202ENST00000391839 BAZ1BQ9UIG0 1483 aaKnown RBP28.61■■■□□ 2.17
COX20-202ENST00000391839 SENP3Q9H4L4 574 aaPredicted RBP28.56■■■□□ 2.16
COX20-202ENST00000391839 PEG3Q9GZU2 1588 aa28.52■■■□□ 2.16
COX20-202ENST00000391839 MROH2BQ7Z745 1585 aa28.44■■■□□ 2.14
COX20-202ENST00000391839 THOC2Q8NI27 1593 aaKnown RBP28.42■■■□□ 2.14
COX20-202ENST00000391839 LAMC3Q9Y6N6 1575 aa28.37■■■□□ 2.13
COX20-202ENST00000391839 KIF21AQ7Z4S6 1674 aa28.32■■■□□ 2.12
COX20-202ENST00000391839 PDS5BQ9NTI5 1447 aa28.18■■■□□ 2.1
COX20-202ENST00000391839 WIZO95785 1651 aa28.13■■■□□ 2.09
COX20-202ENST00000391839 CADPSQ9ULU8 1353 aa28.06■■■□□ 2.08
COX20-202ENST00000391839 MRC2Q9UBG0 1479 aa28.01■■■□□ 2.07
COX20-202ENST00000391839 WDR62O43379 1518 aa27.95■■■□□ 2.06
COX20-202ENST00000391839 CEP164Q9UPV0 1460 aa27.86■■■□□ 2.05
COX20-202ENST00000391839 FANCD2Q9BXW9 1451 aa27.8■■■□□ 2.04
COX20-202ENST00000391839 RSF1Q96T23 1441 aaPredicted RBP27.74■■■□□ 2.03
COX20-202ENST00000391839 TOP2AP11388 1531 aaKnown RBP27.73■■■□□ 2.03
COX20-202ENST00000391839 CFTRP13569 1480 aa27.72■■■□□ 2.03
COX20-202ENST00000391839 TRIM41Q8WV44 630 aa27.7■■■□□ 2.02
COX20-202ENST00000391839 URB2Q14146 1524 aaKnown RBP27.6■■■□□ 2.01
COX20-202ENST00000391839 PRDM2Q13029 1718 aa27.55■■■□□ 2
COX20-202ENST00000391839 OSCARQ8IYS5 282 aa27.4■■□□□ 1.98
COX20-202ENST00000391839 CCDC88BA6NC98 1476 aa27.38■■□□□ 1.97
COX20-202ENST00000391839 ZNF608Q9ULD9 1512 aaPredicted RBP27.3■■□□□ 1.96
COX20-202ENST00000391839 IFT140Q96RY7 1462 aa27.28■■□□□ 1.96
COX20-202ENST00000391839 TOPBP1Q92547 1522 aa27.26■■□□□ 1.96
COX20-202ENST00000391839 RIMBP3CA6NJZ7 1639 aa27.21■■□□□ 1.95
COX20-202ENST00000391839 RIMBP3BA6NNM3 1639 aa27.21■■□□□ 1.95
COX20-202ENST00000391839 RIMBP3Q9UFD9 1639 aa27.21■■□□□ 1.95
COX20-202ENST00000391839 EIF4G3O43432 1585 aaKnown RBP27.18■■□□□ 1.94
COX20-202ENST00000391839 DNMBPQ6XZF7 1577 aa27.16■■□□□ 1.94
COX20-202ENST00000391839 ABCC8Q09428 1581 aa27.12■■□□□ 1.93
COX20-202ENST00000391839 ARHGEF11O15085 1522 aa27.07■■□□□ 1.92
COX20-202ENST00000391839 TARBP1Q13395 1621 aaKnown RBP27.05■■□□□ 1.92
COX20-202ENST00000391839 CHD1O14646 1710 aa27.04■■□□□ 1.92
COX20-202ENST00000391839 AQRO60306 1485 aaKnown RBP eCLIP27■■□□□ 1.915e-7■□□□□ 8.8
COX20-202ENST00000391839 POLA1P09884 1462 aaPredicted RBP26.97■■□□□ 1.91
COX20-202ENST00000391839 RAD54L2Q9Y4B4 1467 aa26.88■■□□□ 1.89
COX20-202ENST00000391839 FBLN2P98095 1184 aa26.85■■□□□ 1.89
COX20-202ENST00000391839 CYB5RLQ6IPT4 315 aa26.82■■□□□ 1.88
COX20-202ENST00000391839 TDRD9Q8NDG6 1382 aaKnown RBP26.8■■□□□ 1.88
COX20-202ENST00000391839 SOGA1O94964 1423 aa26.8■■□□□ 1.88
COX20-202ENST00000391839 ARAP1Q96P48 1450 aa26.8■■□□□ 1.88
COX20-202ENST00000391839 FGD5Q6ZNL6 1462 aa26.79■■□□□ 1.88
COX20-202ENST00000391839 SNAPC4Q5SXM2 1469 aa26.75■■□□□ 1.87
COX20-202ENST00000391839 CUX1P39880 1505 aa26.74■■□□□ 1.87
COX20-202ENST00000391839 WDR97A6NE52 1622 aa26.72■■□□□ 1.87
COX20-202ENST00000391839 FOXD1Q16676 465 aa26.69■■□□□ 1.86
COX20-202ENST00000391839 CLASP1Q7Z460 1538 aa26.66■■□□□ 1.86
COX20-202ENST00000391839 MAGI1Q96QZ7 1491 aaPredicted RBP26.63■■□□□ 1.85
COX20-202ENST00000391839 SYNJ1O43426 1573 aa26.63■■□□□ 1.85
COX20-202ENST00000391839 TRHP20396 242 aaPredicted RBP26.61■■□□□ 1.85
COX20-202ENST00000391839 GRIN2BQ13224 1484 aa26.61■■□□□ 1.85
COX20-202ENST00000391839 PBRM1Q86U86 1689 aa26.6■■□□□ 1.85
COX20-202ENST00000391839 CHMP7Q8WUX9 453 aaPredicted RBP26.58■■□□□ 1.85
COX20-202ENST00000391839 SYNJ2O15056 1496 aa26.55■■□□□ 1.84
COX20-202ENST00000391839 GAPVD1Q14C86 1478 aa26.49■■□□□ 1.83
COX20-202ENST00000391839 ABCA5Q8WWZ7 1642 aa26.48■■□□□ 1.83
COX20-202ENST00000391839 ABCA10Q8WWZ4 1543 aa26.44■■□□□ 1.82
COX20-202ENST00000391839 SUPT5HO00267 1087 aaKnown RBP26.39■■□□□ 1.82
COX20-202ENST00000391839 PLPPR3Q6T4P5 718 aa26.38■■□□□ 1.81
COX20-202ENST00000391839 ADAMTS12P58397 1594 aa26.3■■□□□ 1.8
COX20-202ENST00000391839 GRIN2AQ12879 1464 aa26.3■■□□□ 1.8
COX20-202ENST00000391839 WRNQ14191 1432 aaPredicted RBP eCLIP26.28■■□□□ 1.8
COX20-202ENST00000391839 BIVM-ERCC5R4GMW8 1640 aa26.28■■□□□ 1.8
COX20-202ENST00000391839 ERCC6L2Q5T890 1561 aa26.27■■□□□ 1.8
COX20-202ENST00000391839 TOP2BQ02880 1626 aa26.25■■□□□ 1.79
COX20-202ENST00000391839 CEP170Q5SW79 1584 aa26.24■■□□□ 1.79
COX20-202ENST00000391839 NUP160Q12769 1436 aa26.18■■□□□ 1.78
COX20-202ENST00000391839 SHROOM2Q13796 1616 aa26.14■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms