RNA–Protein interactions for RNA: ENST00000379242.7

VIT-202, Transcript of vitrin, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VIT, Length 2,810 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIT-202ENST00000379242 NISCHQ9Y2I1 1504 aa19.86■□□□□ 0.77
VIT-202ENST00000379242 CCDC180Q9P1Z9 1646 aa17.91■□□□□ 0.46
VIT-202ENST00000379242 ABCC9O60706 1549 aa17.1■□□□□ 0.33
VIT-202ENST00000379242 MYO15BQ96JP2 1530 aa16.84■□□□□ 0.29
VIT-202ENST00000379242 NACADO15069 1562 aa16.79■□□□□ 0.28
VIT-202ENST00000379242 RB1CC1Q8TDY2 1594 aa16.76■□□□□ 0.27
VIT-202ENST00000379242 DCAF1Q9Y4B6 1507 aa16.69■□□□□ 0.26
VIT-202ENST00000379242 ZCCHC6Q5VYS8 1495 aaKnown RBP16.56■□□□□ 0.24
VIT-202ENST00000379242 SHROOM4Q9ULL8 1493 aa16.36■□□□□ 0.21
VIT-202ENST00000379242 UNC13AQ9UPW8 1703 aa16.3■□□□□ 0.2
VIT-202ENST00000379242 BICRAQ9NZM4 1560 aa16.19■□□□□ 0.18
VIT-202ENST00000379242 DCAF8L2P0C7V8 631 aa16.04■□□□□ 0.16
VIT-202ENST00000379242 SCRIBQ14160 1630 aa15.95■□□□□ 0.14
VIT-202ENST00000379242 PABPN1Q86U42 306 aaKnown RBP eCLIP15.82■□□□□ 0.12
VIT-202ENST00000379242 EIF4G1Q04637 1599 aaKnown RBP15.74■□□□□ 0.11
VIT-202ENST00000379242 DNAJC5BQ9UF47 199 aa15.68■□□□□ 0.1
VIT-202ENST00000379242 CC2D2AQ9P2K1 1620 aa15.65■□□□□ 0.1
VIT-202ENST00000379242 CECR2Q9BXF3 1484 aa15.51■□□□□ 0.07
VIT-202ENST00000379242 PEG3Q9GZU2 1588 aa15.46■□□□□ 0.07
VIT-202ENST00000379242 BAZ1AQ9NRL2 1556 aaPredicted RBP15.44■□□□□ 0.06
VIT-202ENST00000379242 SMARCA4P51532 1647 aa15.43■□□□□ 0.06
VIT-202ENST00000379242 NCAPD3P42695 1498 aa15.43■□□□□ 0.06
VIT-202ENST00000379242 SMARCA2P51531 1590 aa15.41■□□□□ 0.06
VIT-202ENST00000379242 HMGXB3Q12766 1538 aa15.41■□□□□ 0.06
VIT-202ENST00000379242 ATAD2BQ9ULI0 1458 aa15.32■□□□□ 0.04
VIT-202ENST00000379242 MROH2BQ7Z745 1585 aa15.18■□□□□ 0.02
VIT-202ENST00000379242 BAZ1BQ9UIG0 1483 aaKnown RBP15.16■□□□□ 0.02
VIT-202ENST00000379242 LAMC3Q9Y6N6 1575 aa15.06■□□□□ 0
VIT-202ENST00000379242 TOP2AP11388 1531 aaKnown RBP15.01□□□□□ -0.01
VIT-202ENST00000379242 RSF1Q96T23 1441 aaPredicted RBP15.01□□□□□ -0.01
VIT-202ENST00000379242 WIZO95785 1651 aa15□□□□□ -0.01
VIT-202ENST00000379242 CUX2O14529 1486 aa14.97□□□□□ -0.01
VIT-202ENST00000379242 CADPSQ9ULU8 1353 aa14.87□□□□□ -0.03
VIT-202ENST00000379242 PDS5BQ9NTI5 1447 aa14.86□□□□□ -0.03
VIT-202ENST00000379242 PRDM2Q13029 1718 aa14.86□□□□□ -0.03
VIT-202ENST00000379242 THOC2Q8NI27 1593 aaKnown RBP14.84□□□□□ -0.03
VIT-202ENST00000379242 CFTRP13569 1480 aa14.83□□□□□ -0.04
VIT-202ENST00000379242 ERCC6Q03468 1493 aa14.81□□□□□ -0.04
VIT-202ENST00000379242 NESP48681 1621 aa14.78□□□□□ -0.04
VIT-202ENST00000379242 KIF21AQ7Z4S6 1674 aa14.76□□□□□ -0.05
VIT-202ENST00000379242 WDR62O43379 1518 aa14.74□□□□□ -0.05
VIT-202ENST00000379242 MRC2Q9UBG0 1479 aa14.72□□□□□ -0.05
VIT-202ENST00000379242 CCDC88BA6NC98 1476 aa14.69□□□□□ -0.06
VIT-202ENST00000379242 CEP164Q9UPV0 1460 aa14.68□□□□□ -0.06
VIT-202ENST00000379242 FANCD2Q9BXW9 1451 aa14.66□□□□□ -0.06
VIT-202ENST00000379242 ABCC8Q09428 1581 aa14.63□□□□□ -0.07
VIT-202ENST00000379242 WDR97A6NE52 1622 aa14.52□□□□□ -0.09
VIT-202ENST00000379242 URB2Q14146 1524 aaKnown RBP14.52□□□□□ -0.09
VIT-202ENST00000379242 DNMBPQ6XZF7 1577 aa14.51□□□□□ -0.09
VIT-202ENST00000379242 IFT140Q96RY7 1462 aa14.45□□□□□ -0.1
VIT-202ENST00000379242 TOPBP1Q92547 1522 aa14.44□□□□□ -0.1
VIT-202ENST00000379242 TARBP1Q13395 1621 aaKnown RBP14.37□□□□□ -0.11
VIT-202ENST00000379242 DNAJC5Q9H3Z4 198 aa14.37□□□□□ -0.11
VIT-202ENST00000379242 HRCP23327 699 aa14.31□□□□□ -0.12
VIT-202ENST00000379242 BIVM-ERCC5R4GMW8 1640 aa14.3□□□□□ -0.12
VIT-202ENST00000379242 POLA1P09884 1462 aaPredicted RBP14.29□□□□□ -0.12
VIT-202ENST00000379242 CUX1P39880 1505 aa14.28□□□□□ -0.12
VIT-202ENST00000379242 EIF4G3O43432 1585 aaKnown RBP14.26□□□□□ -0.13
VIT-202ENST00000379242 TOP2BQ02880 1626 aa14.25□□□□□ -0.13
VIT-202ENST00000379242 FGD5Q6ZNL6 1462 aa14.22□□□□□ -0.13
VIT-202ENST00000379242 ABCA10Q8WWZ4 1543 aa14.21□□□□□ -0.13
VIT-202ENST00000379242 SOGA1O94964 1423 aa14.19□□□□□ -0.14
VIT-202ENST00000379242 ABCA5Q8WWZ7 1642 aa14.18□□□□□ -0.14
VIT-202ENST00000379242 ZNF608Q9ULD9 1512 aaPredicted RBP14.18□□□□□ -0.14
VIT-202ENST00000379242 MAGI1Q96QZ7 1491 aaPredicted RBP14.17□□□□□ -0.14
VIT-202ENST00000379242 SUPT5HO00267 1087 aaKnown RBP14.15□□□□□ -0.14
VIT-202ENST00000379242 WRNQ14191 1432 aaPredicted RBP eCLIP14.14□□□□□ -0.15
VIT-202ENST00000379242 GRIN2BQ13224 1484 aa14.13□□□□□ -0.15
VIT-202ENST00000379242 PBRM1Q86U86 1689 aa14.12□□□□□ -0.15
VIT-202ENST00000379242 SYNJ1O43426 1573 aa14.1□□□□□ -0.15
VIT-202ENST00000379242 RAD54L2Q9Y4B4 1467 aa14.1□□□□□ -0.15
VIT-202ENST00000379242 ERICH3Q5RHP9 1530 aa14.08□□□□□ -0.16
VIT-202ENST00000379242 OSCARQ8IYS5 282 aa14.08□□□□□ -0.16
VIT-202ENST00000379242 CHD1O14646 1710 aa14.08□□□□□ -0.16
VIT-202ENST00000379242 GAPVD1Q14C86 1478 aa14.06□□□□□ -0.16
VIT-202ENST00000379242 SYNJ2O15056 1496 aa14.06□□□□□ -0.16
VIT-202ENST00000379242 AQRO60306 1485 aaKnown RBP eCLIP14.06□□□□□ -0.16
VIT-202ENST00000379242 CLASP1Q7Z460 1538 aa14.04□□□□□ -0.16
VIT-202ENST00000379242 SNAPC4Q5SXM2 1469 aa14.03□□□□□ -0.16
VIT-202ENST00000379242 ADAMTS12P58397 1594 aa14.02□□□□□ -0.17
VIT-202ENST00000379242 TDRD9Q8NDG6 1382 aaKnown RBP13.98□□□□□ -0.17
VIT-202ENST00000379242 FHAD1B1AJZ9 1412 aa13.97□□□□□ -0.17
VIT-202ENST00000379242 CUL7Q14999 1698 aa13.96□□□□□ -0.17
VIT-202ENST00000379242 RIMBP3CA6NJZ7 1639 aa13.95□□□□□ -0.18
VIT-202ENST00000379242 RIMBP3BA6NNM3 1639 aa13.95□□□□□ -0.18
VIT-202ENST00000379242 RIMBP3Q9UFD9 1639 aa13.95□□□□□ -0.18
VIT-202ENST00000379242 PELP1Q8IZL8 1130 aaKnown RBP13.94□□□□□ -0.18
VIT-202ENST00000379242 NUP160Q12769 1436 aa13.94□□□□□ -0.18
VIT-202ENST00000379242 GRIN2AQ12879 1464 aa13.92□□□□□ -0.18
VIT-202ENST00000379242 PPARGC1BQ86YN6 1023 aaKnown RBP13.92□□□□□ -0.18
VIT-202ENST00000379242 SHROOM2Q13796 1616 aa13.92□□□□□ -0.18
VIT-202ENST00000379242 ARHGEF11O15085 1522 aa13.91□□□□□ -0.18
VIT-202ENST00000379242 KIF27Q86VH2 1401 aa13.89□□□□□ -0.19
VIT-202ENST00000379242 PCGF6Q9BYE7 350 aa13.89□□□□□ -0.19
VIT-202ENST00000379242 CHMP7Q8WUX9 453 aaPredicted RBP13.84□□□□□ -0.19
VIT-202ENST00000379242 CEP170Q5SW79 1584 aa13.84□□□□□ -0.19
VIT-202ENST00000379242 RUSC2Q8N2Y8 1516 aa13.8□□□□□ -0.2
VIT-202ENST00000379242 IGF1RP08069 1367 aa13.8□□□□□ -0.2
VIT-202ENST00000379242 CHIC1Q5VXU3 224 aa13.79□□□□□ -0.2
VIT-202ENST00000379242 ARAP1Q96P48 1450 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms