RNA–Protein interactions for RNA: ENST00000374602.2

TCEA3-202, Transcript of transcription elongation factor A3, humanhuman

TSL 3

Gene TCEA3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-202ENST00000374602 NISCHQ9Y2I1 1504 aa16.28■□□□□ 0.2
TCEA3-202ENST00000374602 ABCC9O60706 1549 aa14.83□□□□□ -0.04
TCEA3-202ENST00000374602 CCDC180Q9P1Z9 1646 aa14.82□□□□□ -0.04
TCEA3-202ENST00000374602 AEBP2Q6ZN18 517 aaPredicted RBP14.76□□□□□ -0.05
TCEA3-202ENST00000374602 CHIC1Q5VXU3 224 aa14.64□□□□□ -0.07
TCEA3-202ENST00000374602 RB1CC1Q8TDY2 1594 aa14.15□□□□□ -0.14
TCEA3-202ENST00000374602 NACADO15069 1562 aa13.99□□□□□ -0.17
TCEA3-202ENST00000374602 DNAJC5BQ9UF47 199 aa13.87□□□□□ -0.19
TCEA3-202ENST00000374602 UNC13AQ9UPW8 1703 aa13.84□□□□□ -0.19
TCEA3-202ENST00000374602 DCAF8L2P0C7V8 631 aa13.75□□□□□ -0.21
TCEA3-202ENST00000374602 MYO15BQ96JP2 1530 aa13.72□□□□□ -0.21
TCEA3-202ENST00000374602 PABPN1Q86U42 306 aaKnown RBP eCLIP13.69□□□□□ -0.22
TCEA3-202ENST00000374602 BICRAQ9NZM4 1560 aa13.62□□□□□ -0.23
TCEA3-202ENST00000374602 SHROOM4Q9ULL8 1493 aa13.57□□□□□ -0.24
TCEA3-202ENST00000374602 DCAF1Q9Y4B6 1507 aa13.48□□□□□ -0.25
TCEA3-202ENST00000374602 ZCCHC6Q5VYS8 1495 aaKnown RBP13.48□□□□□ -0.25
TCEA3-202ENST00000374602 CC2D2AQ9P2K1 1620 aa13.44□□□□□ -0.26
TCEA3-202ENST00000374602 SCRIBQ14160 1630 aa13.42□□□□□ -0.26
TCEA3-202ENST00000374602 CECR2Q9BXF3 1484 aa13.41□□□□□ -0.26
TCEA3-202ENST00000374602 EIF4G1Q04637 1599 aaKnown RBP13.37□□□□□ -0.27
TCEA3-202ENST00000374602 DNAJC5Q9H3Z4 198 aa12.96□□□□□ -0.33
TCEA3-202ENST00000374602 CUX2O14529 1486 aa12.93□□□□□ -0.34
TCEA3-202ENST00000374602 ERCC6Q03468 1493 aa12.91□□□□□ -0.34
TCEA3-202ENST00000374602 PHF23Q9BUL5 403 aaPredicted RBP12.84□□□□□ -0.35
TCEA3-202ENST00000374602 NCAPD3P42695 1498 aa12.83□□□□□ -0.36
TCEA3-202ENST00000374602 SMARCA2P51531 1590 aa12.82□□□□□ -0.36
TCEA3-202ENST00000374602 HMGXB3Q12766 1538 aa12.82□□□□□ -0.36
TCEA3-202ENST00000374602 SMARCA4P51532 1647 aa12.79□□□□□ -0.36
TCEA3-202ENST00000374602 ATAD2BQ9ULI0 1458 aa12.78□□□□□ -0.36
TCEA3-202ENST00000374602 BAZ1AQ9NRL2 1556 aaPredicted RBP12.72□□□□□ -0.37
TCEA3-202ENST00000374602 BAZ1BQ9UIG0 1483 aaKnown RBP12.71□□□□□ -0.38
TCEA3-202ENST00000374602 LAMC3Q9Y6N6 1575 aa12.68□□□□□ -0.38
TCEA3-202ENST00000374602 THOC2Q8NI27 1593 aaKnown RBP12.67□□□□□ -0.38
TCEA3-202ENST00000374602 NESP48681 1621 aa12.66□□□□□ -0.38
TCEA3-202ENST00000374602 PEG3Q9GZU2 1588 aa12.65□□□□□ -0.38
TCEA3-202ENST00000374602 KIF21AQ7Z4S6 1674 aa12.62□□□□□ -0.39
TCEA3-202ENST00000374602 SENP3Q9H4L4 574 aaPredicted RBP12.61□□□□□ -0.39
TCEA3-202ENST00000374602 PDS5BQ9NTI5 1447 aa12.57□□□□□ -0.4
TCEA3-202ENST00000374602 MROH2BQ7Z745 1585 aa12.5□□□□□ -0.41
TCEA3-202ENST00000374602 MRC2Q9UBG0 1479 aa12.46□□□□□ -0.41
TCEA3-202ENST00000374602 WDR62O43379 1518 aa12.45□□□□□ -0.42
TCEA3-202ENST00000374602 CADPSQ9ULU8 1353 aa12.43□□□□□ -0.42
TCEA3-202ENST00000374602 CEP164Q9UPV0 1460 aa12.4□□□□□ -0.42
TCEA3-202ENST00000374602 WIZO95785 1651 aa12.4□□□□□ -0.42
TCEA3-202ENST00000374602 TRIM41Q8WV44 630 aa12.38□□□□□ -0.43
TCEA3-202ENST00000374602 PRDM2Q13029 1718 aa12.34□□□□□ -0.43
TCEA3-202ENST00000374602 FANCD2Q9BXW9 1451 aa12.34□□□□□ -0.43
TCEA3-202ENST00000374602 CFTRP13569 1480 aa12.27□□□□□ -0.45
TCEA3-202ENST00000374602 TOP2AP11388 1531 aaKnown RBP12.27□□□□□ -0.45
TCEA3-202ENST00000374602 OSCARQ8IYS5 282 aa12.22□□□□□ -0.45
TCEA3-202ENST00000374602 URB2Q14146 1524 aaKnown RBP12.2□□□□□ -0.46
TCEA3-202ENST00000374602 RIMBP3CA6NJZ7 1639 aa12.16□□□□□ -0.46
TCEA3-202ENST00000374602 RIMBP3BA6NNM3 1639 aa12.16□□□□□ -0.46
TCEA3-202ENST00000374602 RIMBP3Q9UFD9 1639 aa12.16□□□□□ -0.46
TCEA3-202ENST00000374602 RSF1Q96T23 1441 aaPredicted RBP12.15□□□□□ -0.46
TCEA3-202ENST00000374602 IFT140Q96RY7 1462 aa12.14□□□□□ -0.47
TCEA3-202ENST00000374602 EIF4G3O43432 1585 aaKnown RBP12.1□□□□□ -0.47
TCEA3-202ENST00000374602 ABCC8Q09428 1581 aa12.09□□□□□ -0.47
TCEA3-202ENST00000374602 ARHGEF11O15085 1522 aa12.09□□□□□ -0.47
TCEA3-202ENST00000374602 TOPBP1Q92547 1522 aa12.07□□□□□ -0.48
TCEA3-202ENST00000374602 CHD1O14646 1710 aa12.07□□□□□ -0.48
TCEA3-202ENST00000374602 DNMBPQ6XZF7 1577 aa12.07□□□□□ -0.48
TCEA3-202ENST00000374602 ZNF608Q9ULD9 1512 aaPredicted RBP12.06□□□□□ -0.48
TCEA3-202ENST00000374602 CCDC88BA6NC98 1476 aa12.03□□□□□ -0.48
TCEA3-202ENST00000374602 PLPPR3Q6T4P5 718 aa12.01□□□□□ -0.49
TCEA3-202ENST00000374602 TARBP1Q13395 1621 aaKnown RBP11.99□□□□□ -0.49
TCEA3-202ENST00000374602 WDR97A6NE52 1622 aa11.97□□□□□ -0.49
TCEA3-202ENST00000374602 POLA1P09884 1462 aaPredicted RBP11.94□□□□□ -0.5
TCEA3-202ENST00000374602 AQRO60306 1485 aaKnown RBP eCLIP11.92□□□□□ -0.52e-9■□□□□ 9.3
TCEA3-202ENST00000374602 ARAP1Q96P48 1450 aa11.92□□□□□ -0.5
TCEA3-202ENST00000374602 CYB5RLQ6IPT4 315 aa11.92□□□□□ -0.5
TCEA3-202ENST00000374602 SYNJ1O43426 1573 aa11.92□□□□□ -0.5
TCEA3-202ENST00000374602 FBLN2P98095 1184 aa11.91□□□□□ -0.5
TCEA3-202ENST00000374602 TRHP20396 242 aaPredicted RBP11.9□□□□□ -0.5
TCEA3-202ENST00000374602 SNAPC4Q5SXM2 1469 aa11.87□□□□□ -0.51
TCEA3-202ENST00000374602 MAGI1Q96QZ7 1491 aaPredicted RBP11.87□□□□□ -0.51
TCEA3-202ENST00000374602 PBRM1Q86U86 1689 aa11.86□□□□□ -0.51
TCEA3-202ENST00000374602 CLASP1Q7Z460 1538 aa11.86□□□□□ -0.51
TCEA3-202ENST00000374602 SOGA1O94964 1423 aa11.85□□□□□ -0.51
TCEA3-202ENST00000374602 FGD5Q6ZNL6 1462 aa11.84□□□□□ -0.51
TCEA3-202ENST00000374602 RAD54L2Q9Y4B4 1467 aa11.84□□□□□ -0.51
TCEA3-202ENST00000374602 GRIN2BQ13224 1484 aa11.82□□□□□ -0.52
TCEA3-202ENST00000374602 TDRD9Q8NDG6 1382 aaKnown RBP11.8□□□□□ -0.52
TCEA3-202ENST00000374602 CHMP7Q8WUX9 453 aaPredicted RBP11.8□□□□□ -0.52
TCEA3-202ENST00000374602 SYNJ2O15056 1496 aa11.8□□□□□ -0.52
TCEA3-202ENST00000374602 CUX1P39880 1505 aa11.78□□□□□ -0.52
TCEA3-202ENST00000374602 ABCA5Q8WWZ7 1642 aa11.75□□□□□ -0.53
TCEA3-202ENST00000374602 GAPVD1Q14C86 1478 aa11.74□□□□□ -0.53
TCEA3-202ENST00000374602 ABCA10Q8WWZ4 1543 aa11.7□□□□□ -0.54
TCEA3-202ENST00000374602 ADAMTS12P58397 1594 aa11.68□□□□□ -0.54
TCEA3-202ENST00000374602 GRIN2AQ12879 1464 aa11.66□□□□□ -0.54
TCEA3-202ENST00000374602 BIVM-ERCC5R4GMW8 1640 aa11.64□□□□□ -0.55
TCEA3-202ENST00000374602 CEP170Q5SW79 1584 aa11.63□□□□□ -0.55
TCEA3-202ENST00000374602 WRNQ14191 1432 aaPredicted RBP eCLIP11.62□□□□□ -0.55
TCEA3-202ENST00000374602 SHROOM2Q13796 1616 aa11.62□□□□□ -0.55
TCEA3-202ENST00000374602 FOXD1Q16676 465 aa11.61□□□□□ -0.55
TCEA3-202ENST00000374602 NUP160Q12769 1436 aa11.6□□□□□ -0.55
TCEA3-202ENST00000374602 TOP2BQ02880 1626 aa11.6□□□□□ -0.55
TCEA3-202ENST00000374602 KIF13AQ9H1H9 1805 aa11.6□□□□□ -0.55
TCEA3-202ENST00000374602 ERICH3Q5RHP9 1530 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms