RNA–Protein interactions for RNA: ENST00000367153.8

LEMD1-204, Transcript of LEM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD1, Length 929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD1-204ENST00000367153 NISCHQ9Y2I1 1504 aa19.93■□□□□ 0.78
LEMD1-204ENST00000367153 CCDC180Q9P1Z9 1646 aa17.94■□□□□ 0.46
LEMD1-204ENST00000367153 CHIC1Q5VXU3 224 aa17.63■□□□□ 0.41
LEMD1-204ENST00000367153 AEBP2Q6ZN18 517 aaPredicted RBP17.5■□□□□ 0.39
LEMD1-204ENST00000367153 ABCC9O60706 1549 aa17.47■□□□□ 0.39
LEMD1-204ENST00000367153 RB1CC1Q8TDY2 1594 aa16.9■□□□□ 0.3
LEMD1-204ENST00000367153 NACADO15069 1562 aa16.85■□□□□ 0.29
LEMD1-204ENST00000367153 MYO15BQ96JP2 1530 aa16.76■□□□□ 0.27
LEMD1-204ENST00000367153 ZCCHC6Q5VYS8 1495 aaKnown RBP16.59■□□□□ 0.25
LEMD1-204ENST00000367153 DCAF1Q9Y4B6 1507 aa16.59■□□□□ 0.25
LEMD1-204ENST00000367153 UNC13AQ9UPW8 1703 aa16.55■□□□□ 0.24
LEMD1-204ENST00000367153 DCAF8L2P0C7V8 631 aa16.47■□□□□ 0.23
LEMD1-204ENST00000367153 BICRAQ9NZM4 1560 aa16.34■□□□□ 0.21
LEMD1-204ENST00000367153 SHROOM4Q9ULL8 1493 aa16.32■□□□□ 0.2
LEMD1-204ENST00000367153 PABPN1Q86U42 306 aaKnown RBP eCLIP16.2■□□□□ 0.18
LEMD1-204ENST00000367153 SCRIBQ14160 1630 aa16.18■□□□□ 0.18
LEMD1-204ENST00000367153 DNAJC5BQ9UF47 199 aa16.11■□□□□ 0.17
LEMD1-204ENST00000367153 EIF4G1Q04637 1599 aaKnown RBP15.94■□□□□ 0.14
LEMD1-204ENST00000367153 CC2D2AQ9P2K1 1620 aa15.9■□□□□ 0.14
LEMD1-204ENST00000367153 CECR2Q9BXF3 1484 aa15.78■□□□□ 0.12
LEMD1-204ENST00000367153 SMARCA4P51532 1647 aa15.53■□□□□ 0.08
LEMD1-204ENST00000367153 BAZ1AQ9NRL2 1556 aaPredicted RBP15.51■□□□□ 0.07
LEMD1-204ENST00000367153 NCAPD3P42695 1498 aa15.5■□□□□ 0.07
LEMD1-204ENST00000367153 SMARCA2P51531 1590 aa15.49■□□□□ 0.07
LEMD1-204ENST00000367153 PHF23Q9BUL5 403 aaPredicted RBP15.47■□□□□ 0.07
LEMD1-204ENST00000367153 HMGXB3Q12766 1538 aa15.47■□□□□ 0.07
LEMD1-204ENST00000367153 PEG3Q9GZU2 1588 aa15.45■□□□□ 0.06
LEMD1-204ENST00000367153 ATAD2BQ9ULI0 1458 aa15.45■□□□□ 0.06
LEMD1-204ENST00000367153 BAZ1BQ9UIG0 1483 aaKnown RBP15.31■□□□□ 0.04
LEMD1-204ENST00000367153 MROH2BQ7Z745 1585 aa15.3■□□□□ 0.04
LEMD1-204ENST00000367153 LAMC3Q9Y6N6 1575 aa15.18■□□□□ 0.02
LEMD1-204ENST00000367153 WIZO95785 1651 aa15.16■□□□□ 0.02
LEMD1-204ENST00000367153 CUX2O14529 1486 aa15.14■□□□□ 0.01
LEMD1-204ENST00000367153 ERCC6Q03468 1493 aa15.13■□□□□ 0.01
LEMD1-204ENST00000367153 NESP48681 1621 aa15.07■□□□□ 0
LEMD1-204ENST00000367153 RSF1Q96T23 1441 aaPredicted RBP15.05■□□□□ -0
LEMD1-204ENST00000367153 THOC2Q8NI27 1593 aaKnown RBP15.02■□□□□ -0
LEMD1-204ENST00000367153 TOP2AP11388 1531 aaKnown RBP15.02■□□□□ -0
LEMD1-204ENST00000367153 KIF21AQ7Z4S6 1674 aa15.02□□□□□ -0.01
LEMD1-204ENST00000367153 PDS5BQ9NTI5 1447 aa15.01□□□□□ -0.01
LEMD1-204ENST00000367153 CADPSQ9ULU8 1353 aa14.99□□□□□ -0.01
LEMD1-204ENST00000367153 PRDM2Q13029 1718 aa14.95□□□□□ -0.02
LEMD1-204ENST00000367153 SENP3Q9H4L4 574 aaPredicted RBP14.93□□□□□ -0.02
LEMD1-204ENST00000367153 CFTRP13569 1480 aa14.9□□□□□ -0.02
LEMD1-204ENST00000367153 WDR62O43379 1518 aa14.87□□□□□ -0.03
LEMD1-204ENST00000367153 MRC2Q9UBG0 1479 aa14.86□□□□□ -0.03
LEMD1-204ENST00000367153 CEP164Q9UPV0 1460 aa14.85□□□□□ -0.03
LEMD1-204ENST00000367153 FANCD2Q9BXW9 1451 aa14.82□□□□□ -0.04
LEMD1-204ENST00000367153 CCDC88BA6NC98 1476 aa14.77□□□□□ -0.04
LEMD1-204ENST00000367153 DNAJC5Q9H3Z4 198 aa14.75□□□□□ -0.05
LEMD1-204ENST00000367153 URB2Q14146 1524 aaKnown RBP14.67□□□□□ -0.06
LEMD1-204ENST00000367153 ABCC8Q09428 1581 aa14.65□□□□□ -0.06
LEMD1-204ENST00000367153 PLPPR3Q6T4P5 718 aa14.61□□□□□ -0.07
LEMD1-204ENST00000367153 DNMBPQ6XZF7 1577 aa14.6□□□□□ -0.07
LEMD1-204ENST00000367153 TOPBP1Q92547 1522 aa14.58□□□□□ -0.08
LEMD1-204ENST00000367153 IFT140Q96RY7 1462 aa14.55□□□□□ -0.08
LEMD1-204ENST00000367153 WDR97A6NE52 1622 aa14.48□□□□□ -0.09
LEMD1-204ENST00000367153 TARBP1Q13395 1621 aaKnown RBP14.48□□□□□ -0.09
LEMD1-204ENST00000367153 EIF4G3O43432 1585 aaKnown RBP14.46□□□□□ -0.09
LEMD1-204ENST00000367153 POLA1P09884 1462 aaPredicted RBP14.43□□□□□ -0.1
LEMD1-204ENST00000367153 ZNF608Q9ULD9 1512 aaPredicted RBP14.41□□□□□ -0.1
LEMD1-204ENST00000367153 CUX1P39880 1505 aa14.38□□□□□ -0.11
LEMD1-204ENST00000367153 SUPT5HO00267 1087 aaKnown RBP14.36□□□□□ -0.11
LEMD1-204ENST00000367153 FGD5Q6ZNL6 1462 aa14.36□□□□□ -0.11
LEMD1-204ENST00000367153 OSCARQ8IYS5 282 aa14.35□□□□□ -0.11
LEMD1-204ENST00000367153 SOGA1O94964 1423 aa14.33□□□□□ -0.11
LEMD1-204ENST00000367153 CHD1O14646 1710 aa14.32□□□□□ -0.12
LEMD1-204ENST00000367153 BIVM-ERCC5R4GMW8 1640 aa14.32□□□□□ -0.12
LEMD1-204ENST00000367153 RAD54L2Q9Y4B4 1467 aa14.3□□□□□ -0.12
LEMD1-204ENST00000367153 AQRO60306 1485 aaKnown RBP eCLIP14.29□□□□□ -0.12
LEMD1-204ENST00000367153 TOP2BQ02880 1626 aa14.28□□□□□ -0.12
LEMD1-204ENST00000367153 PBRM1Q86U86 1689 aa14.28□□□□□ -0.12
LEMD1-204ENST00000367153 ABCA10Q8WWZ4 1543 aa14.26□□□□□ -0.13
LEMD1-204ENST00000367153 MAGI1Q96QZ7 1491 aaPredicted RBP14.26□□□□□ -0.13
LEMD1-204ENST00000367153 ABCA5Q8WWZ7 1642 aa14.26□□□□□ -0.13
LEMD1-204ENST00000367153 GRIN2BQ13224 1484 aa14.24□□□□□ -0.13
LEMD1-204ENST00000367153 WRNQ14191 1432 aaPredicted RBP eCLIP14.22□□□□□ -0.13
LEMD1-204ENST00000367153 RIMBP3CA6NJZ7 1639 aa14.22□□□□□ -0.13
LEMD1-204ENST00000367153 RIMBP3BA6NNM3 1639 aa14.22□□□□□ -0.13
LEMD1-204ENST00000367153 RIMBP3Q9UFD9 1639 aa14.22□□□□□ -0.13
LEMD1-204ENST00000367153 TDRD9Q8NDG6 1382 aaKnown RBP14.22□□□□□ -0.13
LEMD1-204ENST00000367153 SNAPC4Q5SXM2 1469 aa14.21□□□□□ -0.13
LEMD1-204ENST00000367153 GAPVD1Q14C86 1478 aa14.2□□□□□ -0.14
LEMD1-204ENST00000367153 SYNJ1O43426 1573 aa14.2□□□□□ -0.14
LEMD1-204ENST00000367153 ARHGEF11O15085 1522 aa14.18□□□□□ -0.14
LEMD1-204ENST00000367153 SYNJ2O15056 1496 aa14.18□□□□□ -0.14
LEMD1-204ENST00000367153 CLASP1Q7Z460 1538 aa14.15□□□□□ -0.14
LEMD1-204ENST00000367153 ERICH3Q5RHP9 1530 aa14.12□□□□□ -0.15
LEMD1-204ENST00000367153 ADAMTS12P58397 1594 aa14.11□□□□□ -0.15
LEMD1-204ENST00000367153 FBLN2P98095 1184 aa14.08□□□□□ -0.16
LEMD1-204ENST00000367153 CHMP7Q8WUX9 453 aaPredicted RBP14.08□□□□□ -0.16
LEMD1-204ENST00000367153 TRIM41Q8WV44 630 aa14.07□□□□□ -0.16
LEMD1-204ENST00000367153 GRIN2AQ12879 1464 aa14.06□□□□□ -0.16
LEMD1-204ENST00000367153 FHAD1B1AJZ9 1412 aa14.04□□□□□ -0.16
LEMD1-204ENST00000367153 ARAP1Q96P48 1450 aa14.03□□□□□ -0.16
LEMD1-204ENST00000367153 NUP160Q12769 1436 aa14.01□□□□□ -0.17
LEMD1-204ENST00000367153 CUL7Q14999 1698 aa14□□□□□ -0.17
LEMD1-204ENST00000367153 SHROOM2Q13796 1616 aa13.99□□□□□ -0.17
LEMD1-204ENST00000367153 CEP170Q5SW79 1584 aa13.99□□□□□ -0.17
LEMD1-204ENST00000367153 KIF27Q86VH2 1401 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms