RNA–Protein interactions for RNA: ENST00000364626.1

RN7SKP275-201, Transcript of RNA, 7SK small nuclear pseudogene 275, humanhuman

BASIC

Gene RN7SKP275, Length 301 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP275-201ENST00000364626 NISCHQ9Y2I1 1504 aa15.98■□□□□ 0.15
RN7SKP275-201ENST00000364626 ABCC9O60706 1549 aa14.57□□□□□ -0.08
RN7SKP275-201ENST00000364626 CCDC180Q9P1Z9 1646 aa14.5□□□□□ -0.09
RN7SKP275-201ENST00000364626 DNAJC5BQ9UF47 199 aa13.89□□□□□ -0.19
RN7SKP275-201ENST00000364626 RB1CC1Q8TDY2 1594 aa13.84□□□□□ -0.19
RN7SKP275-201ENST00000364626 NACADO15069 1562 aa13.72□□□□□ -0.21
RN7SKP275-201ENST00000364626 UNC13AQ9UPW8 1703 aa13.6□□□□□ -0.23
RN7SKP275-201ENST00000364626 MYO15BQ96JP2 1530 aa13.53□□□□□ -0.24
RN7SKP275-201ENST00000364626 BICRAQ9NZM4 1560 aa13.5□□□□□ -0.25
RN7SKP275-201ENST00000364626 PABPN1Q86U42 306 aaKnown RBP eCLIP13.47□□□□□ -0.25
RN7SKP275-201ENST00000364626 AEBP2Q6ZN18 517 aaPredicted RBP13.45□□□□□ -0.26
RN7SKP275-201ENST00000364626 SHROOM4Q9ULL8 1493 aa13.34□□□□□ -0.27
RN7SKP275-201ENST00000364626 DCAF8L2P0C7V8 631 aa13.32□□□□□ -0.28
RN7SKP275-201ENST00000364626 DCAF1Q9Y4B6 1507 aa13.26□□□□□ -0.29
RN7SKP275-201ENST00000364626 ZCCHC6Q5VYS8 1495 aaKnown RBP13.23□□□□□ -0.29
RN7SKP275-201ENST00000364626 CC2D2AQ9P2K1 1620 aa13.22□□□□□ -0.29
RN7SKP275-201ENST00000364626 CECR2Q9BXF3 1484 aa13.17□□□□□ -0.3
RN7SKP275-201ENST00000364626 EIF4G1Q04637 1599 aaKnown RBP13.15□□□□□ -0.3
RN7SKP275-201ENST00000364626 SCRIBQ14160 1630 aa13.09□□□□□ -0.31
RN7SKP275-201ENST00000364626 DNAJC5Q9H3Z4 198 aa12.91□□□□□ -0.34
RN7SKP275-201ENST00000364626 CUX2O14529 1486 aa12.73□□□□□ -0.37
RN7SKP275-201ENST00000364626 NCAPD3P42695 1498 aa12.66□□□□□ -0.38
RN7SKP275-201ENST00000364626 HMGXB3Q12766 1538 aa12.58□□□□□ -0.4
RN7SKP275-201ENST00000364626 CHIC1Q5VXU3 224 aa12.58□□□□□ -0.4
RN7SKP275-201ENST00000364626 ATAD2BQ9ULI0 1458 aa12.58□□□□□ -0.4
RN7SKP275-201ENST00000364626 ERCC6Q03468 1493 aa12.57□□□□□ -0.4
RN7SKP275-201ENST00000364626 SMARCA2P51531 1590 aa12.53□□□□□ -0.4
RN7SKP275-201ENST00000364626 SMARCA4P51532 1647 aa12.52□□□□□ -0.4
RN7SKP275-201ENST00000364626 NESP48681 1621 aa12.48□□□□□ -0.41
RN7SKP275-201ENST00000364626 THOC2Q8NI27 1593 aaKnown RBP12.48□□□□□ -0.41
RN7SKP275-201ENST00000364626 PEG3Q9GZU2 1588 aa12.47□□□□□ -0.41
RN7SKP275-201ENST00000364626 LAMC3Q9Y6N6 1575 aa12.42□□□□□ -0.42
RN7SKP275-201ENST00000364626 BAZ1AQ9NRL2 1556 aaPredicted RBP12.41□□□□□ -0.42
RN7SKP275-201ENST00000364626 BAZ1BQ9UIG0 1483 aaKnown RBP12.4□□□□□ -0.42
RN7SKP275-201ENST00000364626 KIF21AQ7Z4S6 1674 aa12.36□□□□□ -0.43
RN7SKP275-201ENST00000364626 MROH2BQ7Z745 1585 aa12.29□□□□□ -0.44
RN7SKP275-201ENST00000364626 PDS5BQ9NTI5 1447 aa12.28□□□□□ -0.44
RN7SKP275-201ENST00000364626 WDR62O43379 1518 aa12.25□□□□□ -0.45
RN7SKP275-201ENST00000364626 MRC2Q9UBG0 1479 aa12.22□□□□□ -0.45
RN7SKP275-201ENST00000364626 CADPSQ9ULU8 1353 aa12.22□□□□□ -0.45
RN7SKP275-201ENST00000364626 TRIM41Q8WV44 630 aa12.13□□□□□ -0.47
RN7SKP275-201ENST00000364626 WIZO95785 1651 aa12.13□□□□□ -0.47
RN7SKP275-201ENST00000364626 CEP164Q9UPV0 1460 aa12.12□□□□□ -0.47
RN7SKP275-201ENST00000364626 FANCD2Q9BXW9 1451 aa12.08□□□□□ -0.47
RN7SKP275-201ENST00000364626 CFTRP13569 1480 aa12.08□□□□□ -0.48
RN7SKP275-201ENST00000364626 POTEDQ86YR6 584 aa12.04□□□□□ -0.48
RN7SKP275-201ENST00000364626 URB2Q14146 1524 aaKnown RBP12.03□□□□□ -0.48
RN7SKP275-201ENST00000364626 OSCARQ8IYS5 282 aa12□□□□□ -0.49
RN7SKP275-201ENST00000364626 PRDM2Q13029 1718 aa12□□□□□ -0.49
RN7SKP275-201ENST00000364626 TOP2AP11388 1531 aaKnown RBP11.99□□□□□ -0.49
RN7SKP275-201ENST00000364626 RIMBP3CA6NJZ7 1639 aa11.97□□□□□ -0.49
RN7SKP275-201ENST00000364626 RIMBP3BA6NNM3 1639 aa11.97□□□□□ -0.49
RN7SKP275-201ENST00000364626 RIMBP3Q9UFD9 1639 aa11.97□□□□□ -0.49
RN7SKP275-201ENST00000364626 RSF1Q96T23 1441 aaPredicted RBP11.95□□□□□ -0.5
RN7SKP275-201ENST00000364626 ARHGEF11O15085 1522 aa11.9□□□□□ -0.5
RN7SKP275-201ENST00000364626 IFT140Q96RY7 1462 aa11.89□□□□□ -0.51
RN7SKP275-201ENST00000364626 ZNF608Q9ULD9 1512 aaPredicted RBP11.89□□□□□ -0.51
RN7SKP275-201ENST00000364626 EIF4G3O43432 1585 aaKnown RBP11.85□□□□□ -0.51
RN7SKP275-201ENST00000364626 TOPBP1Q92547 1522 aa11.85□□□□□ -0.51
RN7SKP275-201ENST00000364626 TARBP1Q13395 1621 aaKnown RBP11.82□□□□□ -0.52
RN7SKP275-201ENST00000364626 ABCC8Q09428 1581 aa11.81□□□□□ -0.52
RN7SKP275-201ENST00000364626 CCDC88BA6NC98 1476 aa11.81□□□□□ -0.52
RN7SKP275-201ENST00000364626 DNMBPQ6XZF7 1577 aa11.8□□□□□ -0.52
RN7SKP275-201ENST00000364626 CHD1O14646 1710 aa11.8□□□□□ -0.52
RN7SKP275-201ENST00000364626 ARAP1Q96P48 1450 aa11.77□□□□□ -0.52
RN7SKP275-201ENST00000364626 AQRO60306 1485 aaKnown RBP eCLIP11.72□□□□□ -0.53
RN7SKP275-201ENST00000364626 POLA1P09884 1462 aaPredicted RBP11.71□□□□□ -0.53
RN7SKP275-201ENST00000364626 CYB5RLQ6IPT4 315 aa11.7□□□□□ -0.54
RN7SKP275-201ENST00000364626 WDR97A6NE52 1622 aa11.7□□□□□ -0.54
RN7SKP275-201ENST00000364626 CLASP1Q7Z460 1538 aa11.7□□□□□ -0.54
RN7SKP275-201ENST00000364626 SENP3Q9H4L4 574 aaPredicted RBP11.63□□□□□ -0.55
RN7SKP275-201ENST00000364626 RAD54L2Q9Y4B4 1467 aa11.63□□□□□ -0.55
RN7SKP275-201ENST00000364626 SNAPC4Q5SXM2 1469 aa11.62□□□□□ -0.55
RN7SKP275-201ENST00000364626 MAGI1Q96QZ7 1491 aaPredicted RBP11.61□□□□□ -0.55
RN7SKP275-201ENST00000364626 SYNJ1O43426 1573 aa11.6□□□□□ -0.55
RN7SKP275-201ENST00000364626 SOGA1O94964 1423 aa11.6□□□□□ -0.55
RN7SKP275-201ENST00000364626 TRHP20396 242 aaPredicted RBP11.59□□□□□ -0.55
RN7SKP275-201ENST00000364626 FGD5Q6ZNL6 1462 aa11.58□□□□□ -0.56
RN7SKP275-201ENST00000364626 TDRD9Q8NDG6 1382 aaKnown RBP11.58□□□□□ -0.56
RN7SKP275-201ENST00000364626 CUX1P39880 1505 aa11.57□□□□□ -0.56
RN7SKP275-201ENST00000364626 SYNJ2O15056 1496 aa11.57□□□□□ -0.56
RN7SKP275-201ENST00000364626 GRIN2BQ13224 1484 aa11.57□□□□□ -0.56
RN7SKP275-201ENST00000364626 FBLN2P98095 1184 aa11.56□□□□□ -0.56
RN7SKP275-201ENST00000364626 PBRM1Q86U86 1689 aa11.54□□□□□ -0.56
RN7SKP275-201ENST00000364626 ABCA5Q8WWZ7 1642 aa11.52□□□□□ -0.57
RN7SKP275-201ENST00000364626 GAPVD1Q14C86 1478 aa11.51□□□□□ -0.57
RN7SKP275-201ENST00000364626 CHMP7Q8WUX9 453 aaPredicted RBP11.49□□□□□ -0.57
RN7SKP275-201ENST00000364626 ABCA10Q8WWZ4 1543 aa11.48□□□□□ -0.57
RN7SKP275-201ENST00000364626 SHROOM2Q13796 1616 aa11.45□□□□□ -0.58
RN7SKP275-201ENST00000364626 ERCC6L2Q5T890 1561 aa11.45□□□□□ -0.58
RN7SKP275-201ENST00000364626 GRIN2AQ12879 1464 aa11.43□□□□□ -0.58
RN7SKP275-201ENST00000364626 NUP160Q12769 1436 aa11.43□□□□□ -0.58
RN7SKP275-201ENST00000364626 ADAMTS12P58397 1594 aa11.42□□□□□ -0.58
RN7SKP275-201ENST00000364626 CEP170Q5SW79 1584 aa11.41□□□□□ -0.58
RN7SKP275-201ENST00000364626 KIF13AQ9H1H9 1805 aa11.39□□□□□ -0.59
RN7SKP275-201ENST00000364626 BIVM-ERCC5R4GMW8 1640 aa11.36□□□□□ -0.59
RN7SKP275-201ENST00000364626 PHF23Q9BUL5 403 aaPredicted RBP11.36□□□□□ -0.59
RN7SKP275-201ENST00000364626 TOP2BQ02880 1626 aa11.35□□□□□ -0.59
RN7SKP275-201ENST00000364626 ERICH3Q5RHP9 1530 aa11.34□□□□□ -0.59
RN7SKP275-201ENST00000364626 FHAD1B1AJZ9 1412 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms