RNA–Protein interactions for RNA: ENST00000363328.1

RN7SKP211-201, Transcript of RNA, 7SK small nuclear pseudogene 211, humanhuman

BASIC

Gene RN7SKP211, Length 315 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP211-201ENST00000363328 NISCHQ9Y2I1 1504 aa18.47■□□□□ 0.55
RN7SKP211-201ENST00000363328 CCDC180Q9P1Z9 1646 aa16.62■□□□□ 0.25
RN7SKP211-201ENST00000363328 ABCC9O60706 1549 aa16.54■□□□□ 0.24
RN7SKP211-201ENST00000363328 RB1CC1Q8TDY2 1594 aa15.8■□□□□ 0.12
RN7SKP211-201ENST00000363328 NACADO15069 1562 aa15.72■□□□□ 0.11
RN7SKP211-201ENST00000363328 DNAJC5BQ9UF47 199 aa15.61■□□□□ 0.09
RN7SKP211-201ENST00000363328 MYO15BQ96JP2 1530 aa15.58■□□□□ 0.08
RN7SKP211-201ENST00000363328 UNC13AQ9UPW8 1703 aa15.46■□□□□ 0.06
RN7SKP211-201ENST00000363328 DCAF8L2P0C7V8 631 aa15.41■□□□□ 0.06
RN7SKP211-201ENST00000363328 BICRAQ9NZM4 1560 aa15.38■□□□□ 0.05
RN7SKP211-201ENST00000363328 PABPN1Q86U42 306 aaKnown RBP eCLIP15.36■□□□□ 0.05
RN7SKP211-201ENST00000363328 DCAF1Q9Y4B6 1507 aa15.34■□□□□ 0.05
RN7SKP211-201ENST00000363328 ZCCHC6Q5VYS8 1495 aaKnown RBP15.3■□□□□ 0.04
RN7SKP211-201ENST00000363328 AEBP2Q6ZN18 517 aaPredicted RBP15.3■□□□□ 0.04
RN7SKP211-201ENST00000363328 SHROOM4Q9ULL8 1493 aa15.22■□□□□ 0.03
RN7SKP211-201ENST00000363328 SCRIBQ14160 1630 aa15.01□□□□□ -0.01
RN7SKP211-201ENST00000363328 CC2D2AQ9P2K1 1620 aa14.99□□□□□ -0.01
RN7SKP211-201ENST00000363328 EIF4G1Q04637 1599 aaKnown RBP14.97□□□□□ -0.01
RN7SKP211-201ENST00000363328 CECR2Q9BXF3 1484 aa14.94□□□□□ -0.02
RN7SKP211-201ENST00000363328 CHIC1Q5VXU3 224 aa14.73□□□□□ -0.05
RN7SKP211-201ENST00000363328 NCAPD3P42695 1498 aa14.54□□□□□ -0.08
RN7SKP211-201ENST00000363328 ATAD2BQ9ULI0 1458 aa14.44□□□□□ -0.1
RN7SKP211-201ENST00000363328 DNAJC5Q9H3Z4 198 aa14.4□□□□□ -0.1
RN7SKP211-201ENST00000363328 SMARCA4P51532 1647 aa14.4□□□□□ -0.1
RN7SKP211-201ENST00000363328 HMGXB3Q12766 1538 aa14.4□□□□□ -0.1
RN7SKP211-201ENST00000363328 SMARCA2P51531 1590 aa14.39□□□□□ -0.11
RN7SKP211-201ENST00000363328 CUX2O14529 1486 aa14.37□□□□□ -0.11
RN7SKP211-201ENST00000363328 PEG3Q9GZU2 1588 aa14.34□□□□□ -0.11
RN7SKP211-201ENST00000363328 BAZ1AQ9NRL2 1556 aaPredicted RBP14.33□□□□□ -0.12
RN7SKP211-201ENST00000363328 ERCC6Q03468 1493 aa14.25□□□□□ -0.13
RN7SKP211-201ENST00000363328 BAZ1BQ9UIG0 1483 aaKnown RBP14.25□□□□□ -0.13
RN7SKP211-201ENST00000363328 NESP48681 1621 aa14.21□□□□□ -0.13
RN7SKP211-201ENST00000363328 MROH2BQ7Z745 1585 aa14.2□□□□□ -0.14
RN7SKP211-201ENST00000363328 LAMC3Q9Y6N6 1575 aa14.18□□□□□ -0.14
RN7SKP211-201ENST00000363328 THOC2Q8NI27 1593 aaKnown RBP14.13□□□□□ -0.15
RN7SKP211-201ENST00000363328 PDS5BQ9NTI5 1447 aa14.07□□□□□ -0.16
RN7SKP211-201ENST00000363328 CADPSQ9ULU8 1353 aa14.05□□□□□ -0.16
RN7SKP211-201ENST00000363328 KIF21AQ7Z4S6 1674 aa14.04□□□□□ -0.16
RN7SKP211-201ENST00000363328 WIZO95785 1651 aa14.01□□□□□ -0.17
RN7SKP211-201ENST00000363328 MRC2Q9UBG0 1479 aa13.94□□□□□ -0.18
RN7SKP211-201ENST00000363328 WDR62O43379 1518 aa13.94□□□□□ -0.18
RN7SKP211-201ENST00000363328 RSF1Q96T23 1441 aaPredicted RBP13.91□□□□□ -0.18
RN7SKP211-201ENST00000363328 CFTRP13569 1480 aa13.9□□□□□ -0.18
RN7SKP211-201ENST00000363328 CEP164Q9UPV0 1460 aa13.86□□□□□ -0.19
RN7SKP211-201ENST00000363328 TOP2AP11388 1531 aaKnown RBP13.85□□□□□ -0.19
RN7SKP211-201ENST00000363328 FANCD2Q9BXW9 1451 aa13.85□□□□□ -0.19
RN7SKP211-201ENST00000363328 URB2Q14146 1524 aaKnown RBP13.75□□□□□ -0.21
RN7SKP211-201ENST00000363328 PRDM2Q13029 1718 aa13.74□□□□□ -0.21
RN7SKP211-201ENST00000363328 CCDC88BA6NC98 1476 aa13.69□□□□□ -0.22
RN7SKP211-201ENST00000363328 OSCARQ8IYS5 282 aa13.66□□□□□ -0.22
RN7SKP211-201ENST00000363328 IFT140Q96RY7 1462 aa13.61□□□□□ -0.23
RN7SKP211-201ENST00000363328 ABCC8Q09428 1581 aa13.61□□□□□ -0.23
RN7SKP211-201ENST00000363328 TOPBP1Q92547 1522 aa13.59□□□□□ -0.23
RN7SKP211-201ENST00000363328 TRIM41Q8WV44 630 aa13.58□□□□□ -0.24
RN7SKP211-201ENST00000363328 ZNF608Q9ULD9 1512 aaPredicted RBP13.56□□□□□ -0.24
RN7SKP211-201ENST00000363328 DNMBPQ6XZF7 1577 aa13.55□□□□□ -0.24
RN7SKP211-201ENST00000363328 TARBP1Q13395 1621 aaKnown RBP13.51□□□□□ -0.25
RN7SKP211-201ENST00000363328 EIF4G3O43432 1585 aaKnown RBP13.49□□□□□ -0.25
RN7SKP211-201ENST00000363328 SUPT5HO00267 1087 aaKnown RBP13.48□□□□□ -0.25
RN7SKP211-201ENST00000363328 RIMBP3CA6NJZ7 1639 aa13.47□□□□□ -0.25
RN7SKP211-201ENST00000363328 RIMBP3BA6NNM3 1639 aa13.47□□□□□ -0.25
RN7SKP211-201ENST00000363328 RIMBP3Q9UFD9 1639 aa13.47□□□□□ -0.25
RN7SKP211-201ENST00000363328 POLA1P09884 1462 aaPredicted RBP13.46□□□□□ -0.25
RN7SKP211-201ENST00000363328 ARHGEF11O15085 1522 aa13.44□□□□□ -0.26
RN7SKP211-201ENST00000363328 AQRO60306 1485 aaKnown RBP eCLIP13.42□□□□□ -0.26
RN7SKP211-201ENST00000363328 WDR97A6NE52 1622 aa13.42□□□□□ -0.26
RN7SKP211-201ENST00000363328 CHD1O14646 1710 aa13.39□□□□□ -0.27
RN7SKP211-201ENST00000363328 SOGA1O94964 1423 aa13.38□□□□□ -0.27
RN7SKP211-201ENST00000363328 RAD54L2Q9Y4B4 1467 aa13.36□□□□□ -0.27
RN7SKP211-201ENST00000363328 CUX1P39880 1505 aa13.34□□□□□ -0.27
RN7SKP211-201ENST00000363328 FGD5Q6ZNL6 1462 aa13.34□□□□□ -0.27
RN7SKP211-201ENST00000363328 TDRD9Q8NDG6 1382 aaKnown RBP13.32□□□□□ -0.28
RN7SKP211-201ENST00000363328 ARAP1Q96P48 1450 aa13.3□□□□□ -0.28
RN7SKP211-201ENST00000363328 MAGI1Q96QZ7 1491 aaPredicted RBP13.3□□□□□ -0.28
RN7SKP211-201ENST00000363328 CLASP1Q7Z460 1538 aa13.29□□□□□ -0.28
RN7SKP211-201ENST00000363328 GRIN2BQ13224 1484 aa13.29□□□□□ -0.28
RN7SKP211-201ENST00000363328 CYB5RLQ6IPT4 315 aa13.28□□□□□ -0.28
RN7SKP211-201ENST00000363328 SNAPC4Q5SXM2 1469 aa13.28□□□□□ -0.28
RN7SKP211-201ENST00000363328 SYNJ2O15056 1496 aa13.25□□□□□ -0.29
RN7SKP211-201ENST00000363328 FBLN2P98095 1184 aa13.25□□□□□ -0.29
RN7SKP211-201ENST00000363328 ABCA10Q8WWZ4 1543 aa13.24□□□□□ -0.29
RN7SKP211-201ENST00000363328 SYNJ1O43426 1573 aa13.24□□□□□ -0.29
RN7SKP211-201ENST00000363328 CHMP7Q8WUX9 453 aaPredicted RBP13.22□□□□□ -0.29
RN7SKP211-201ENST00000363328 GAPVD1Q14C86 1478 aa13.22□□□□□ -0.29
RN7SKP211-201ENST00000363328 ABCA5Q8WWZ7 1642 aa13.21□□□□□ -0.29
RN7SKP211-201ENST00000363328 PBRM1Q86U86 1689 aa13.21□□□□□ -0.3
RN7SKP211-201ENST00000363328 BIVM-ERCC5R4GMW8 1640 aa13.15□□□□□ -0.3
RN7SKP211-201ENST00000363328 WRNQ14191 1432 aaPredicted RBP eCLIP13.13□□□□□ -0.31
RN7SKP211-201ENST00000363328 TOP2BQ02880 1626 aa13.13□□□□□ -0.31
RN7SKP211-201ENST00000363328 NUP160Q12769 1436 aa13.11□□□□□ -0.31
RN7SKP211-201ENST00000363328 GRIN2AQ12879 1464 aa13.1□□□□□ -0.31
RN7SKP211-201ENST00000363328 TRHP20396 242 aaPredicted RBP13.09□□□□□ -0.31
RN7SKP211-201ENST00000363328 ADAMTS12P58397 1594 aa13.08□□□□□ -0.32
RN7SKP211-201ENST00000363328 ERICH3Q5RHP9 1530 aa13.08□□□□□ -0.32
RN7SKP211-201ENST00000363328 FHAD1B1AJZ9 1412 aa13.07□□□□□ -0.32
RN7SKP211-201ENST00000363328 CEP170Q5SW79 1584 aa13.06□□□□□ -0.32
RN7SKP211-201ENST00000363328 SHROOM2Q13796 1616 aa13.06□□□□□ -0.32
RN7SKP211-201ENST00000363328 ERCC6L2Q5T890 1561 aa13.03□□□□□ -0.32
RN7SKP211-201ENST00000363328 PHF23Q9BUL5 403 aaPredicted RBP12.96□□□□□ -0.33
RN7SKP211-201ENST00000363328 SENP3Q9H4L4 574 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms