RNA–Protein interactions for RNA: ENST00000314014.6

C12orf54-201, Transcript of chromosome 12 open reading frame 54, humanhuman

APPRIS P1 TSL 3 BASIC

Gene C12orf54, Length 887 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf54-201ENST00000314014 NISCHQ9Y2I1 1504 aa22.47■■□□□ 1.19
C12orf54-201ENST00000314014 ABCC9O60706 1549 aa20.38■□□□□ 0.85
C12orf54-201ENST00000314014 CCDC180Q9P1Z9 1646 aa20.31■□□□□ 0.84
C12orf54-201ENST00000314014 RB1CC1Q8TDY2 1594 aa19.41■□□□□ 0.7
C12orf54-201ENST00000314014 DNAJC5BQ9UF47 199 aa19.28■□□□□ 0.68
C12orf54-201ENST00000314014 NACADO15069 1562 aa19.25■□□□□ 0.67
C12orf54-201ENST00000314014 MYO15BQ96JP2 1530 aa19■□□□□ 0.63
C12orf54-201ENST00000314014 PABPN1Q86U42 306 aaKnown RBP eCLIP18.89■□□□□ 0.61
C12orf54-201ENST00000314014 UNC13AQ9UPW8 1703 aa18.88■□□□□ 0.61
C12orf54-201ENST00000314014 DCAF8L2P0C7V8 631 aa18.87■□□□□ 0.61
C12orf54-201ENST00000314014 BICRAQ9NZM4 1560 aa18.82■□□□□ 0.6
C12orf54-201ENST00000314014 SHROOM4Q9ULL8 1493 aa18.71■□□□□ 0.59
C12orf54-201ENST00000314014 DCAF1Q9Y4B6 1507 aa18.64■□□□□ 0.58
C12orf54-201ENST00000314014 ZCCHC6Q5VYS8 1495 aaKnown RBP18.6■□□□□ 0.57
C12orf54-201ENST00000314014 CC2D2AQ9P2K1 1620 aa18.44■□□□□ 0.54
C12orf54-201ENST00000314014 CECR2Q9BXF3 1484 aa18.44■□□□□ 0.54
C12orf54-201ENST00000314014 EIF4G1Q04637 1599 aaKnown RBP18.38■□□□□ 0.53
C12orf54-201ENST00000314014 SCRIBQ14160 1630 aa18.36■□□□□ 0.53
C12orf54-201ENST00000314014 CHIC1Q5VXU3 224 aa18.05■□□□□ 0.48
C12orf54-201ENST00000314014 DNAJC5Q9H3Z4 198 aa17.95■□□□□ 0.46
C12orf54-201ENST00000314014 CUX2O14529 1486 aa17.79■□□□□ 0.44
C12orf54-201ENST00000314014 NCAPD3P42695 1498 aa17.77■□□□□ 0.44
C12orf54-201ENST00000314014 AEBP2Q6ZN18 517 aaPredicted RBP17.69■□□□□ 0.42
C12orf54-201ENST00000314014 ERCC6Q03468 1493 aa17.65■□□□□ 0.42
C12orf54-201ENST00000314014 ATAD2BQ9ULI0 1458 aa17.64■□□□□ 0.41
C12orf54-201ENST00000314014 HMGXB3Q12766 1538 aa17.64■□□□□ 0.41
C12orf54-201ENST00000314014 SMARCA2P51531 1590 aa17.62■□□□□ 0.41
C12orf54-201ENST00000314014 SMARCA4P51532 1647 aa17.57■□□□□ 0.4
C12orf54-201ENST00000314014 BAZ1AQ9NRL2 1556 aaPredicted RBP17.49■□□□□ 0.39
C12orf54-201ENST00000314014 PEG3Q9GZU2 1588 aa17.47■□□□□ 0.39
C12orf54-201ENST00000314014 BAZ1BQ9UIG0 1483 aaKnown RBP17.45■□□□□ 0.38
C12orf54-201ENST00000314014 NESP48681 1621 aa17.44■□□□□ 0.38
C12orf54-201ENST00000314014 LAMC3Q9Y6N6 1575 aa17.4■□□□□ 0.38
C12orf54-201ENST00000314014 THOC2Q8NI27 1593 aaKnown RBP17.38■□□□□ 0.37
C12orf54-201ENST00000314014 PDS5BQ9NTI5 1447 aa17.3■□□□□ 0.36
C12orf54-201ENST00000314014 MROH2BQ7Z745 1585 aa17.27■□□□□ 0.35
C12orf54-201ENST00000314014 KIF21AQ7Z4S6 1674 aa17.22■□□□□ 0.35
C12orf54-201ENST00000314014 CADPSQ9ULU8 1353 aa17.19■□□□□ 0.34
C12orf54-201ENST00000314014 MRC2Q9UBG0 1479 aa17.15■□□□□ 0.34
C12orf54-201ENST00000314014 WDR62O43379 1518 aa17.13■□□□□ 0.33
C12orf54-201ENST00000314014 CEP164Q9UPV0 1460 aa17.03■□□□□ 0.32
C12orf54-201ENST00000314014 WIZO95785 1651 aa17.01■□□□□ 0.31
C12orf54-201ENST00000314014 CFTRP13569 1480 aa16.97■□□□□ 0.31
C12orf54-201ENST00000314014 FANCD2Q9BXW9 1451 aa16.97■□□□□ 0.31
C12orf54-201ENST00000314014 TRIM41Q8WV44 630 aa16.94■□□□□ 0.3
C12orf54-201ENST00000314014 TOP2AP11388 1531 aaKnown RBP16.87■□□□□ 0.29
C12orf54-201ENST00000314014 OSCARQ8IYS5 282 aa16.86■□□□□ 0.29
C12orf54-201ENST00000314014 RSF1Q96T23 1441 aaPredicted RBP16.86■□□□□ 0.29
C12orf54-201ENST00000314014 URB2Q14146 1524 aaKnown RBP16.84■□□□□ 0.29
C12orf54-201ENST00000314014 PRDM2Q13029 1718 aa16.75■□□□□ 0.27
C12orf54-201ENST00000314014 IFT140Q96RY7 1462 aa16.72■□□□□ 0.27
C12orf54-201ENST00000314014 ABCC8Q09428 1581 aa16.65■□□□□ 0.26
C12orf54-201ENST00000314014 RIMBP3CA6NJZ7 1639 aa16.65■□□□□ 0.26
C12orf54-201ENST00000314014 RIMBP3BA6NNM3 1639 aa16.65■□□□□ 0.26
C12orf54-201ENST00000314014 RIMBP3Q9UFD9 1639 aa16.65■□□□□ 0.26
C12orf54-201ENST00000314014 ZNF608Q9ULD9 1512 aaPredicted RBP16.64■□□□□ 0.25
C12orf54-201ENST00000314014 TOPBP1Q92547 1522 aa16.63■□□□□ 0.25
C12orf54-201ENST00000314014 CCDC88BA6NC98 1476 aa16.62■□□□□ 0.25
C12orf54-201ENST00000314014 ARHGEF11O15085 1522 aa16.6■□□□□ 0.25
C12orf54-201ENST00000314014 DNMBPQ6XZF7 1577 aa16.57■□□□□ 0.24
C12orf54-201ENST00000314014 EIF4G3O43432 1585 aaKnown RBP16.56■□□□□ 0.24
C12orf54-201ENST00000314014 TARBP1Q13395 1621 aaKnown RBP16.5■□□□□ 0.23
C12orf54-201ENST00000314014 POLA1P09884 1462 aaPredicted RBP16.45■□□□□ 0.22
C12orf54-201ENST00000314014 AQRO60306 1485 aaKnown RBP eCLIP16.44■□□□□ 0.22
C12orf54-201ENST00000314014 CHD1O14646 1710 aa16.44■□□□□ 0.22
C12orf54-201ENST00000314014 WDR97A6NE52 1622 aa16.43■□□□□ 0.22
C12orf54-201ENST00000314014 ARAP1Q96P48 1450 aa16.42■□□□□ 0.22
C12orf54-201ENST00000314014 CYB5RLQ6IPT4 315 aa16.41■□□□□ 0.22
C12orf54-201ENST00000314014 SOGA1O94964 1423 aa16.35■□□□□ 0.21
C12orf54-201ENST00000314014 RAD54L2Q9Y4B4 1467 aa16.33■□□□□ 0.2
C12orf54-201ENST00000314014 FBLN2P98095 1184 aa16.32■□□□□ 0.2
C12orf54-201ENST00000314014 CLASP1Q7Z460 1538 aa16.32■□□□□ 0.2
C12orf54-201ENST00000314014 MAGI1Q96QZ7 1491 aaPredicted RBP16.32■□□□□ 0.2
C12orf54-201ENST00000314014 SNAPC4Q5SXM2 1469 aa16.31■□□□□ 0.2
C12orf54-201ENST00000314014 TDRD9Q8NDG6 1382 aaKnown RBP16.31■□□□□ 0.2
C12orf54-201ENST00000314014 FGD5Q6ZNL6 1462 aa16.29■□□□□ 0.2
C12orf54-201ENST00000314014 SYNJ1O43426 1573 aa16.29■□□□□ 0.2
C12orf54-201ENST00000314014 GRIN2BQ13224 1484 aa16.28■□□□□ 0.2
C12orf54-201ENST00000314014 TRHP20396 242 aaPredicted RBP16.27■□□□□ 0.2
C12orf54-201ENST00000314014 SYNJ2O15056 1496 aa16.25■□□□□ 0.19
C12orf54-201ENST00000314014 CUX1P39880 1505 aa16.24■□□□□ 0.19
C12orf54-201ENST00000314014 CHMP7Q8WUX9 453 aaPredicted RBP16.23■□□□□ 0.19
C12orf54-201ENST00000314014 GAPVD1Q14C86 1478 aa16.16■□□□□ 0.18
C12orf54-201ENST00000314014 ABCA10Q8WWZ4 1543 aa16.15■□□□□ 0.18
C12orf54-201ENST00000314014 PBRM1Q86U86 1689 aa16.14■□□□□ 0.17
C12orf54-201ENST00000314014 ABCA5Q8WWZ7 1642 aa16.13■□□□□ 0.17
C12orf54-201ENST00000314014 GRIN2AQ12879 1464 aa16.05■□□□□ 0.16
C12orf54-201ENST00000314014 NUP160Q12769 1436 aa16.04■□□□□ 0.16
C12orf54-201ENST00000314014 WRNQ14191 1432 aaPredicted RBP eCLIP16.02■□□□□ 0.16
C12orf54-201ENST00000314014 ADAMTS12P58397 1594 aa16.02■□□□□ 0.16
C12orf54-201ENST00000314014 PHF23Q9BUL5 403 aaPredicted RBP16■□□□□ 0.15
C12orf54-201ENST00000314014 CEP170Q5SW79 1584 aa15.99■□□□□ 0.15
C12orf54-201ENST00000314014 SHROOM2Q13796 1616 aa15.98■□□□□ 0.15
C12orf54-201ENST00000314014 FHAD1B1AJZ9 1412 aa15.98■□□□□ 0.15
C12orf54-201ENST00000314014 ERCC6L2Q5T890 1561 aa15.96■□□□□ 0.15
C12orf54-201ENST00000314014 TOP2BQ02880 1626 aa15.96■□□□□ 0.15
C12orf54-201ENST00000314014 BIVM-ERCC5R4GMW8 1640 aa15.96■□□□□ 0.15
C12orf54-201ENST00000314014 ERICH3Q5RHP9 1530 aa15.95■□□□□ 0.14
C12orf54-201ENST00000314014 PRG4Q92954 1404 aaPredicted RBP15.84■□□□□ 0.13
C12orf54-201ENST00000314014 KIF13AQ9H1H9 1805 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms