RNA–Protein interactions for RNA: ENST00000309049.8

PBLD-202, Transcript of phenazine biosynthesis like protein domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PBLD, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBLD-202ENST00000309049 NISCHQ9Y2I1 1504 aa18.32■□□□□ 0.52
PBLD-202ENST00000309049 CCDC180Q9P1Z9 1646 aa16.6■□□□□ 0.25
PBLD-202ENST00000309049 AEBP2Q6ZN18 517 aaPredicted RBP16.3■□□□□ 0.2
PBLD-202ENST00000309049 ABCC9O60706 1549 aa16.27■□□□□ 0.19
PBLD-202ENST00000309049 RB1CC1Q8TDY2 1594 aa15.69■□□□□ 0.1
PBLD-202ENST00000309049 NACADO15069 1562 aa15.6■□□□□ 0.09
PBLD-202ENST00000309049 CHIC1Q5VXU3 224 aa15.56■□□□□ 0.08
PBLD-202ENST00000309049 MYO15BQ96JP2 1530 aa15.43■□□□□ 0.06
PBLD-202ENST00000309049 UNC13AQ9UPW8 1703 aa15.33■□□□□ 0.05
PBLD-202ENST00000309049 DCAF8L2P0C7V8 631 aa15.25■□□□□ 0.03
PBLD-202ENST00000309049 DCAF1Q9Y4B6 1507 aa15.24■□□□□ 0.03
PBLD-202ENST00000309049 ZCCHC6Q5VYS8 1495 aaKnown RBP15.22■□□□□ 0.03
PBLD-202ENST00000309049 SHROOM4Q9ULL8 1493 aa15.13■□□□□ 0.01
PBLD-202ENST00000309049 BICRAQ9NZM4 1560 aa15.12■□□□□ 0.01
PBLD-202ENST00000309049 PABPN1Q86U42 306 aaKnown RBP eCLIP15.05■□□□□ -0
PBLD-202ENST00000309049 DNAJC5BQ9UF47 199 aa15.04■□□□□ -0
PBLD-202ENST00000309049 SCRIBQ14160 1630 aa14.95□□□□□ -0.02
PBLD-202ENST00000309049 CC2D2AQ9P2K1 1620 aa14.79□□□□□ -0.04
PBLD-202ENST00000309049 EIF4G1Q04637 1599 aaKnown RBP14.78□□□□□ -0.04
PBLD-202ENST00000309049 CECR2Q9BXF3 1484 aa14.69□□□□□ -0.06
PBLD-202ENST00000309049 SMARCA4P51532 1647 aa14.33□□□□□ -0.12
PBLD-202ENST00000309049 SMARCA2P51531 1590 aa14.33□□□□□ -0.12
PBLD-202ENST00000309049 NCAPD3P42695 1498 aa14.31□□□□□ -0.12
PBLD-202ENST00000309049 HMGXB3Q12766 1538 aa14.3□□□□□ -0.12
PBLD-202ENST00000309049 BAZ1AQ9NRL2 1556 aaPredicted RBP14.28□□□□□ -0.12
PBLD-202ENST00000309049 ATAD2BQ9ULI0 1458 aa14.25□□□□□ -0.13
PBLD-202ENST00000309049 PEG3Q9GZU2 1588 aa14.22□□□□□ -0.13
PBLD-202ENST00000309049 BAZ1BQ9UIG0 1483 aaKnown RBP14.16□□□□□ -0.14
PBLD-202ENST00000309049 CUX2O14529 1486 aa14.15□□□□□ -0.14
PBLD-202ENST00000309049 ERCC6Q03468 1493 aa14.13□□□□□ -0.15
PBLD-202ENST00000309049 LAMC3Q9Y6N6 1575 aa14.07□□□□□ -0.16
PBLD-202ENST00000309049 MROH2BQ7Z745 1585 aa14.06□□□□□ -0.16
PBLD-202ENST00000309049 SUPT5HO00267 1087 aaKnown RBP14.06□□□□□ -0.16
PBLD-202ENST00000309049 NESP48681 1621 aa13.96□□□□□ -0.17
PBLD-202ENST00000309049 THOC2Q8NI27 1593 aaKnown RBP13.96□□□□□ -0.17
PBLD-202ENST00000309049 KIF21AQ7Z4S6 1674 aa13.94□□□□□ -0.18
PBLD-202ENST00000309049 WIZO95785 1651 aa13.94□□□□□ -0.18
PBLD-202ENST00000309049 PDS5BQ9NTI5 1447 aa13.93□□□□□ -0.18
PBLD-202ENST00000309049 SENP3Q9H4L4 574 aaPredicted RBP13.92□□□□□ -0.18
PBLD-202ENST00000309049 DNAJC5Q9H3Z4 198 aa13.89□□□□□ -0.19
PBLD-202ENST00000309049 HRCP23327 699 aa13.86□□□□□ -0.19
PBLD-202ENST00000309049 CADPSQ9ULU8 1353 aa13.84□□□□□ -0.19
PBLD-202ENST00000309049 TOP2AP11388 1531 aaKnown RBP13.84□□□□□ -0.19
PBLD-202ENST00000309049 PRDM2Q13029 1718 aa13.82□□□□□ -0.2
PBLD-202ENST00000309049 MRC2Q9UBG0 1479 aa13.81□□□□□ -0.2
PBLD-202ENST00000309049 WDR62O43379 1518 aa13.79□□□□□ -0.2
PBLD-202ENST00000309049 RSF1Q96T23 1441 aaPredicted RBP13.78□□□□□ -0.2
PBLD-202ENST00000309049 CEP164Q9UPV0 1460 aa13.77□□□□□ -0.21
PBLD-202ENST00000309049 PHF23Q9BUL5 403 aaPredicted RBP13.73□□□□□ -0.21
PBLD-202ENST00000309049 CFTRP13569 1480 aa13.72□□□□□ -0.21
PBLD-202ENST00000309049 FANCD2Q9BXW9 1451 aa13.71□□□□□ -0.21
PBLD-202ENST00000309049 MYT1Q01538 1121 aa13.59□□□□□ -0.23
PBLD-202ENST00000309049 PCGF6Q9BYE7 350 aa13.57□□□□□ -0.24
PBLD-202ENST00000309049 CCDC88BA6NC98 1476 aa13.57□□□□□ -0.24
PBLD-202ENST00000309049 URB2Q14146 1524 aaKnown RBP13.57□□□□□ -0.24
PBLD-202ENST00000309049 PELP1Q8IZL8 1130 aaKnown RBP13.55□□□□□ -0.24
PBLD-202ENST00000309049 ABCC8Q09428 1581 aa13.55□□□□□ -0.24
PBLD-202ENST00000309049 IFT140Q96RY7 1462 aa13.49□□□□□ -0.25
PBLD-202ENST00000309049 DNMBPQ6XZF7 1577 aa13.49□□□□□ -0.25
PBLD-202ENST00000309049 TOPBP1Q92547 1522 aa13.47□□□□□ -0.25
PBLD-202ENST00000309049 SLC24A1O60721 1099 aa13.46□□□□□ -0.25
PBLD-202ENST00000309049 TRIM26Q12899 539 aaPredicted RBP13.46□□□□□ -0.25
PBLD-202ENST00000309049 ZEB1P37275 1124 aaPredicted RBP13.45□□□□□ -0.26
PBLD-202ENST00000309049 WDR97A6NE52 1622 aa13.4□□□□□ -0.26
PBLD-202ENST00000309049 EIF4G3O43432 1585 aaKnown RBP13.4□□□□□ -0.26
PBLD-202ENST00000309049 OSCARQ8IYS5 282 aa13.38□□□□□ -0.27
PBLD-202ENST00000309049 TARBP1Q13395 1621 aaKnown RBP13.37□□□□□ -0.27
PBLD-202ENST00000309049 ZNF608Q9ULD9 1512 aaPredicted RBP13.34□□□□□ -0.27
PBLD-202ENST00000309049 CHD1O14646 1710 aa13.32□□□□□ -0.28
PBLD-202ENST00000309049 POLA1P09884 1462 aaPredicted RBP13.31□□□□□ -0.28
PBLD-202ENST00000309049 TTBK1Q5TCY1 1321 aaPredicted RBP13.3□□□□□ -0.28
PBLD-202ENST00000309049 LOC105371045A0A1W2PR82 267 aa13.28□□□□□ -0.28
PBLD-202ENST00000309049 RIMBP3CA6NJZ7 1639 aa13.28□□□□□ -0.28
PBLD-202ENST00000309049 RIMBP3BA6NNM3 1639 aa13.28□□□□□ -0.28
PBLD-202ENST00000309049 RIMBP3Q9UFD9 1639 aa13.28□□□□□ -0.28
PBLD-202ENST00000309049 TRIM41Q8WV44 630 aa13.26□□□□□ -0.29
PBLD-202ENST00000309049 PPARGC1BQ86YN6 1023 aaKnown RBP13.25□□□□□ -0.29
PBLD-202ENST00000309049 FGD5Q6ZNL6 1462 aa13.25□□□□□ -0.29
PBLD-202ENST00000309049 SOGA1O94964 1423 aa13.24□□□□□ -0.29
PBLD-202ENST00000309049 CUX1P39880 1505 aa13.23□□□□□ -0.29
PBLD-202ENST00000309049 PBRM1Q86U86 1689 aa13.22□□□□□ -0.29
PBLD-202ENST00000309049 AQRO60306 1485 aaKnown RBP eCLIP13.22□□□□□ -0.29
PBLD-202ENST00000309049 MAGI1Q96QZ7 1491 aaPredicted RBP13.21□□□□□ -0.29
PBLD-202ENST00000309049 ARHGEF11O15085 1522 aa13.21□□□□□ -0.29
PBLD-202ENST00000309049 RAD54L2Q9Y4B4 1467 aa13.2□□□□□ -0.3
PBLD-202ENST00000309049 SYNJ1O43426 1573 aa13.19□□□□□ -0.3
PBLD-202ENST00000309049 GRIN2BQ13224 1484 aa13.18□□□□□ -0.3
PBLD-202ENST00000309049 SNAPC4Q5SXM2 1469 aa13.16□□□□□ -0.3
PBLD-202ENST00000309049 BIVM-ERCC5R4GMW8 1640 aa13.16□□□□□ -0.3
PBLD-202ENST00000309049 ABCA5Q8WWZ7 1642 aa13.15□□□□□ -0.3
PBLD-202ENST00000309049 CLASP1Q7Z460 1538 aa13.13□□□□□ -0.31
PBLD-202ENST00000309049 ABCA10Q8WWZ4 1543 aa13.13□□□□□ -0.31
PBLD-202ENST00000309049 SYNJ2O15056 1496 aa13.13□□□□□ -0.31
PBLD-202ENST00000309049 TDRD9Q8NDG6 1382 aaKnown RBP13.13□□□□□ -0.31
PBLD-202ENST00000309049 TOP2BQ02880 1626 aa13.12□□□□□ -0.31
PBLD-202ENST00000309049 GAPVD1Q14C86 1478 aa13.11□□□□□ -0.31
PBLD-202ENST00000309049 FBLN2P98095 1184 aa13.1□□□□□ -0.31
PBLD-202ENST00000309049 WRNQ14191 1432 aaPredicted RBP eCLIP13.08□□□□□ -0.32
PBLD-202ENST00000309049 CHMP7Q8WUX9 453 aaPredicted RBP13.07□□□□□ -0.32
PBLD-202ENST00000309049 ARAP1Q96P48 1450 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms