RNA–Protein interactions for RNA: ENST00000281453.9

CENPU-201, Transcript of centromere protein U, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CENPU, Length 1,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPU-201ENST00000281453 NISCHQ9Y2I1 1504 aa46.55■■■■■ 5.04
CENPU-201ENST00000281453 CCDC180Q9P1Z9 1646 aa40.49■■■■■ 4.07
CENPU-201ENST00000281453 ZCCHC6Q5VYS8 1495 aaKnown RBP39.16■■■■□ 3.86
CENPU-201ENST00000281453 DCAF1Q9Y4B6 1507 aa38.49■■■■□ 3.75
CENPU-201ENST00000281453 DCAF8L2P0C7V8 631 aa38.37■■■■□ 3.73
CENPU-201ENST00000281453 SHROOM4Q9ULL8 1493 aa38.17■■■■□ 3.7
CENPU-201ENST00000281453 ABCC9O60706 1549 aa38.05■■■■□ 3.68
CENPU-201ENST00000281453 MYO15BQ96JP2 1530 aa37.93■■■■□ 3.66
CENPU-201ENST00000281453 NACADO15069 1562 aa37.64■■■■□ 3.62
CENPU-201ENST00000281453 SCRIBQ14160 1630 aa37.28■■■■□ 3.56
CENPU-201ENST00000281453 RB1CC1Q8TDY2 1594 aa37.26■■■■□ 3.56
CENPU-201ENST00000281453 SUPT5HO00267 1087 aaKnown RBP36.86■■■■□ 3.49
CENPU-201ENST00000281453 UNC13AQ9UPW8 1703 aa36.53■■■■□ 3.44
CENPU-201ENST00000281453 RSF1Q96T23 1441 aaPredicted RBP36.21■■■■□ 3.39
CENPU-201ENST00000281453 CECR2Q9BXF3 1484 aa36.14■■■■□ 3.38
CENPU-201ENST00000281453 BICRAQ9NZM4 1560 aa36.12■■■■□ 3.37
CENPU-201ENST00000281453 MROH2BQ7Z745 1585 aa35.98■■■■□ 3.35
CENPU-201ENST00000281453 BAZ1AQ9NRL2 1556 aaPredicted RBP35.93■■■■□ 3.34
CENPU-201ENST00000281453 PABPN1Q86U42 306 aaKnown RBP eCLIP35.92■■■■□ 3.34
CENPU-201ENST00000281453 SMARCA4P51532 1647 aa35.74■■■■□ 3.31
CENPU-201ENST00000281453 WIZO95785 1651 aa35.71■■■■□ 3.31
CENPU-201ENST00000281453 CHIC1Q5VXU3 224 aa35.41■■■■□ 3.26
CENPU-201ENST00000281453 TOP2AP11388 1531 aaKnown RBP35.35■■■■□ 3.25
CENPU-201ENST00000281453 PEG3Q9GZU2 1588 aa35.28■■■■□ 3.24
CENPU-201ENST00000281453 SMARCA2P51531 1590 aa35.08■■■■□ 3.21
CENPU-201ENST00000281453 ATAD2BQ9ULI0 1458 aa35.08■■■■□ 3.21
CENPU-201ENST00000281453 EIF4G1Q04637 1599 aaKnown RBP35.01■■■■□ 3.2
CENPU-201ENST00000281453 CCDC88BA6NC98 1476 aa34.98■■■■□ 3.19
CENPU-201ENST00000281453 BAZ1BQ9UIG0 1483 aaKnown RBP34.91■■■■□ 3.18
CENPU-201ENST00000281453 NCAPD3P42695 1498 aa34.72■■■■□ 3.15
CENPU-201ENST00000281453 HMGXB3Q12766 1538 aa34.72■■■■□ 3.15
CENPU-201ENST00000281453 TRIM41Q8WV44 630 aa34.64■■■■□ 3.14
CENPU-201ENST00000281453 CC2D2AQ9P2K1 1620 aa34.43■■■■□ 3.1
CENPU-201ENST00000281453 ABCC8Q09428 1581 aa34.34■■■■□ 3.09
CENPU-201ENST00000281453 WRNQ14191 1432 aaPredicted RBP eCLIP34.09■■■■□ 3.05
CENPU-201ENST00000281453 LOC105371045A0A1W2PR82 267 aa34.06■■■■□ 3.04
CENPU-201ENST00000281453 CFTRP13569 1480 aa34.03■■■■□ 3.04
CENPU-201ENST00000281453 FAM9AQ8IZU1 332 aaPredicted RBP34.02■■■■□ 3.04
CENPU-201ENST00000281453 SYNJ1O43426 1573 aa33.94■■■■□ 3.02
CENPU-201ENST00000281453 PRDM2Q13029 1718 aa33.92■■■■□ 3.02
CENPU-201ENST00000281453 CADPSQ9ULU8 1353 aa33.86■■■■□ 3.01
CENPU-201ENST00000281453 TOP2BQ02880 1626 aa33.79■■■■□ 3
CENPU-201ENST00000281453 EEA1Q15075 1411 aa33.76■■■□□ 2.99
CENPU-201ENST00000281453 BIVM-ERCC5R4GMW8 1640 aa33.75■■■□□ 2.99
CENPU-201ENST00000281453 SOGA1O94964 1423 aa33.74■■■□□ 2.99
CENPU-201ENST00000281453 CUX1P39880 1505 aa33.63■■■□□ 2.97
CENPU-201ENST00000281453 RUSC2Q8N2Y8 1516 aa33.59■■■□□ 2.97
CENPU-201ENST00000281453 CSRNP3Q8WYN3 585 aa33.52■■■□□ 2.96
CENPU-201ENST00000281453 EHMT2Q96KQ7 1210 aa33.52■■■□□ 2.96
CENPU-201ENST00000281453 LAMC3Q9Y6N6 1575 aa33.52■■■□□ 2.96
CENPU-201ENST00000281453 FANCD2Q9BXW9 1451 aa33.5■■■□□ 2.95
CENPU-201ENST00000281453 NESP48681 1621 aa33.48■■■□□ 2.95
CENPU-201ENST00000281453 DNAJC5BQ9UF47 199 aa33.43■■■□□ 2.94
CENPU-201ENST00000281453 KIF21BO75037 1637 aa33.3■■■□□ 2.92
CENPU-201ENST00000281453 GOLGA3Q08378 1498 aa33.3■■■□□ 2.92
CENPU-201ENST00000281453 CEP164Q9UPV0 1460 aa33.28■■■□□ 2.92
CENPU-201ENST00000281453 DNMBPQ6XZF7 1577 aa33.26■■■□□ 2.91
CENPU-201ENST00000281453 PDS5BQ9NTI5 1447 aa33.25■■■□□ 2.91
CENPU-201ENST00000281453 TNIKQ9UKE5 1360 aa33.24■■■□□ 2.91
CENPU-201ENST00000281453 FGD5Q6ZNL6 1462 aa33.23■■■□□ 2.91
CENPU-201ENST00000281453 KIF27Q86VH2 1401 aa33.21■■■□□ 2.91
CENPU-201ENST00000281453 TOPBP1Q92547 1522 aa33.17■■■□□ 2.9
CENPU-201ENST00000281453 UBTFP17480 764 aaKnown RBP33.14■■■□□ 2.9
CENPU-201ENST00000281453 KIF21AQ7Z4S6 1674 aa33.1■■■□□ 2.89
CENPU-201ENST00000281453 CEP162Q5TB80 1403 aa33.08■■■□□ 2.89
CENPU-201ENST00000281453 CUX2O14529 1486 aa33.07■■■□□ 2.88
CENPU-201ENST00000281453 URB2Q14146 1524 aaKnown RBP33.06■■■□□ 2.88
CENPU-201ENST00000281453 RAPGEF2Q9Y4G8 1499 aa33.05■■■□□ 2.88
CENPU-201ENST00000281453 PRXQ9BXM0 1461 aa33.04■■■□□ 2.88
CENPU-201ENST00000281453 ERICH3Q5RHP9 1530 aa33.03■■■□□ 2.88
CENPU-201ENST00000281453 POLA1P09884 1462 aaPredicted RBP33.02■■■□□ 2.88
CENPU-201ENST00000281453 ABCA10Q8WWZ4 1543 aa32.93■■■□□ 2.86
CENPU-201ENST00000281453 RAD54L2Q9Y4B4 1467 aa32.91■■■□□ 2.86
CENPU-201ENST00000281453 IGF1RP08069 1367 aa32.86■■■□□ 2.85
CENPU-201ENST00000281453 MRC2Q9UBG0 1479 aa32.82■■■□□ 2.84
CENPU-201ENST00000281453 WDR97A6NE52 1622 aa32.81■■■□□ 2.84
CENPU-201ENST00000281453 PCGF6Q9BYE7 350 aa32.79■■■□□ 2.84
CENPU-201ENST00000281453 CLIP1P30622 1438 aa32.77■■■□□ 2.84
CENPU-201ENST00000281453 TRIM26Q12899 539 aaPredicted RBP32.74■■■□□ 2.83
CENPU-201ENST00000281453 CARMIL1Q5VZK9 1371 aa32.72■■■□□ 2.83
CENPU-201ENST00000281453 ABCA5Q8WWZ7 1642 aa32.65■■■□□ 2.82
CENPU-201ENST00000281453 TARBP1Q13395 1621 aaKnown RBP32.65■■■□□ 2.82
CENPU-201ENST00000281453 CUL7Q14999 1698 aa32.63■■■□□ 2.81
CENPU-201ENST00000281453 WDR62O43379 1518 aa32.63■■■□□ 2.81
CENPU-201ENST00000281453 ERCC6Q03468 1493 aa32.61■■■□□ 2.81
CENPU-201ENST00000281453 TDRD9Q8NDG6 1382 aaKnown RBP32.57■■■□□ 2.8
CENPU-201ENST00000281453 GAPVD1Q14C86 1478 aa32.57■■■□□ 2.8
CENPU-201ENST00000281453 VPS8Q8N3P4 1428 aa32.52■■■□□ 2.8
CENPU-201ENST00000281453 RANGAP1P46060 587 aaPredicted RBP32.51■■■□□ 2.8
CENPU-201ENST00000281453 THOC2Q8NI27 1593 aaKnown RBP32.47■■■□□ 2.79
CENPU-201ENST00000281453 IFT140Q96RY7 1462 aa32.46■■■□□ 2.79
CENPU-201ENST00000281453 PPARGC1BQ86YN6 1023 aaKnown RBP32.45■■■□□ 2.79
CENPU-201ENST00000281453 ARAP1Q96P48 1450 aa32.41■■■□□ 2.78
CENPU-201ENST00000281453 PBRM1Q86U86 1689 aa32.39■■■□□ 2.78
CENPU-201ENST00000281453 ARHGAP35Q9NRY4 1499 aa32.35■■■□□ 2.77
CENPU-201ENST00000281453 AQRO60306 1485 aaKnown RBP eCLIP32.32■■■□□ 2.761e-6■■■■□ 20.9
CENPU-201ENST00000281453 CTTNBP2Q8WZ74 1663 aa32.31■■■□□ 2.76
CENPU-201ENST00000281453 GRIN2BQ13224 1484 aa32.28■■■□□ 2.76
CENPU-201ENST00000281453 ZNF608Q9ULD9 1512 aaPredicted RBP32.25■■■□□ 2.75
CENPU-201ENST00000281453 APLP2Q06481 763 aa32.23■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms