RNA–Protein interactions for RNA: ENST00000268957.3

TOB1-201, Transcript of transducer of ERBB2, 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOB1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOB1-201ENST00000268957 NISCHQ9Y2I1 1504 aa24.62■■□□□ 1.53
TOB1-201ENST00000268957 CCDC180Q9P1Z9 1646 aa22.03■■□□□ 1.12
TOB1-201ENST00000268957 ABCC9O60706 1549 aa21.8■■□□□ 1.08
TOB1-201ENST00000268957 AEBP2Q6ZN18 517 aaPredicted RBP21.07■□□□□ 0.96
TOB1-201ENST00000268957 RB1CC1Q8TDY2 1594 aa20.87■□□□□ 0.93
TOB1-201ENST00000268957 NACADO15069 1562 aa20.79■□□□□ 0.92
TOB1-201ENST00000268957 DCAF8L2P0C7V8 631 aa20.74■□□□□ 0.91
TOB1-201ENST00000268957 MYO15BQ96JP2 1530 aa20.58■□□□□ 0.88
TOB1-201ENST00000268957 DNAJC5BQ9UF47 199 aa20.54■□□□□ 0.88
TOB1-201ENST00000268957 ZCCHC6Q5VYS8 1495 aaKnown RBP20.44■□□□□ 0.86
TOB1-201ENST00000268957 UNC13AQ9UPW8 1703 aa20.4■□□□□ 0.86
TOB1-201ENST00000268957 DCAF1Q9Y4B6 1507 aa20.37■□□□□ 0.85
TOB1-201ENST00000268957 PABPN1Q86U42 306 aaKnown RBP eCLIP20.34■□□□□ 0.85
TOB1-201ENST00000268957 BICRAQ9NZM4 1560 aa20.22■□□□□ 0.83
TOB1-201ENST00000268957 SCRIBQ14160 1630 aa20.04■□□□□ 0.8
TOB1-201ENST00000268957 SHROOM4Q9ULL8 1493 aa20.01■□□□□ 0.79
TOB1-201ENST00000268957 EIF4G1Q04637 1599 aaKnown RBP19.73■□□□□ 0.75
TOB1-201ENST00000268957 CC2D2AQ9P2K1 1620 aa19.72■□□□□ 0.75
TOB1-201ENST00000268957 CHIC1Q5VXU3 224 aa19.71■□□□□ 0.75
TOB1-201ENST00000268957 CECR2Q9BXF3 1484 aa19.64■□□□□ 0.74
TOB1-201ENST00000268957 NCAPD3P42695 1498 aa19.19■□□□□ 0.66
TOB1-201ENST00000268957 SMARCA4P51532 1647 aa19.16■□□□□ 0.66
TOB1-201ENST00000268957 ATAD2BQ9ULI0 1458 aa19.13■□□□□ 0.65
TOB1-201ENST00000268957 BAZ1AQ9NRL2 1556 aaPredicted RBP19.12■□□□□ 0.65
TOB1-201ENST00000268957 SMARCA2P51531 1590 aa19.11■□□□□ 0.65
TOB1-201ENST00000268957 HMGXB3Q12766 1538 aa19.04■□□□□ 0.64
TOB1-201ENST00000268957 PEG3Q9GZU2 1588 aa18.99■□□□□ 0.63
TOB1-201ENST00000268957 BAZ1BQ9UIG0 1483 aaKnown RBP18.96■□□□□ 0.63
TOB1-201ENST00000268957 MROH2BQ7Z745 1585 aa18.96■□□□□ 0.63
TOB1-201ENST00000268957 DNAJC5Q9H3Z4 198 aa18.93■□□□□ 0.62
TOB1-201ENST00000268957 CUX2O14529 1486 aa18.85■□□□□ 0.61
TOB1-201ENST00000268957 ERCC6Q03468 1493 aa18.83■□□□□ 0.6
TOB1-201ENST00000268957 NESP48681 1621 aa18.77■□□□□ 0.6
TOB1-201ENST00000268957 WIZO95785 1651 aa18.75■□□□□ 0.59
TOB1-201ENST00000268957 LAMC3Q9Y6N6 1575 aa18.73■□□□□ 0.59
TOB1-201ENST00000268957 RSF1Q96T23 1441 aaPredicted RBP18.65■□□□□ 0.58
TOB1-201ENST00000268957 PDS5BQ9NTI5 1447 aa18.62■□□□□ 0.57
TOB1-201ENST00000268957 CADPSQ9ULU8 1353 aa18.61■□□□□ 0.57
TOB1-201ENST00000268957 KIF21AQ7Z4S6 1674 aa18.56■□□□□ 0.56
TOB1-201ENST00000268957 THOC2Q8NI27 1593 aaKnown RBP18.54■□□□□ 0.56
TOB1-201ENST00000268957 TOP2AP11388 1531 aaKnown RBP18.52■□□□□ 0.56
TOB1-201ENST00000268957 CFTRP13569 1480 aa18.43■□□□□ 0.54
TOB1-201ENST00000268957 MRC2Q9UBG0 1479 aa18.41■□□□□ 0.54
TOB1-201ENST00000268957 CEP164Q9UPV0 1460 aa18.39■□□□□ 0.53
TOB1-201ENST00000268957 FANCD2Q9BXW9 1451 aa18.38■□□□□ 0.53
TOB1-201ENST00000268957 WDR62O43379 1518 aa18.36■□□□□ 0.53
TOB1-201ENST00000268957 CCDC88BA6NC98 1476 aa18.32■□□□□ 0.52
TOB1-201ENST00000268957 PRDM2Q13029 1718 aa18.29■□□□□ 0.52
TOB1-201ENST00000268957 URB2Q14146 1524 aaKnown RBP18.2■□□□□ 0.5
TOB1-201ENST00000268957 SENP3Q9H4L4 574 aaPredicted RBP18.11■□□□□ 0.49
TOB1-201ENST00000268957 ABCC8Q09428 1581 aa18.08■□□□□ 0.49
TOB1-201ENST00000268957 TOPBP1Q92547 1522 aa18.05■□□□□ 0.48
TOB1-201ENST00000268957 IFT140Q96RY7 1462 aa18.02■□□□□ 0.47
TOB1-201ENST00000268957 OSCARQ8IYS5 282 aa18.01■□□□□ 0.47
TOB1-201ENST00000268957 DNMBPQ6XZF7 1577 aa18■□□□□ 0.47
TOB1-201ENST00000268957 SUPT5HO00267 1087 aaKnown RBP18■□□□□ 0.47
TOB1-201ENST00000268957 TRIM41Q8WV44 630 aa17.95■□□□□ 0.46
TOB1-201ENST00000268957 ZNF608Q9ULD9 1512 aaPredicted RBP17.94■□□□□ 0.46
TOB1-201ENST00000268957 TARBP1Q13395 1621 aaKnown RBP17.88■□□□□ 0.45
TOB1-201ENST00000268957 POLA1P09884 1462 aaPredicted RBP17.87■□□□□ 0.45
TOB1-201ENST00000268957 EIF4G3O43432 1585 aaKnown RBP17.86■□□□□ 0.45
TOB1-201ENST00000268957 SOGA1O94964 1423 aa17.83■□□□□ 0.44
TOB1-201ENST00000268957 AQRO60306 1485 aaKnown RBP eCLIP17.82■□□□□ 0.445e-6■■□□□ 13.9
TOB1-201ENST00000268957 RAD54L2Q9Y4B4 1467 aa17.8■□□□□ 0.44
TOB1-201ENST00000268957 CUX1P39880 1505 aa17.79■□□□□ 0.44
TOB1-201ENST00000268957 FGD5Q6ZNL6 1462 aa17.79■□□□□ 0.44
TOB1-201ENST00000268957 PHF23Q9BUL5 403 aaPredicted RBP17.77■□□□□ 0.44
TOB1-201ENST00000268957 TDRD9Q8NDG6 1382 aaKnown RBP17.75■□□□□ 0.43
TOB1-201ENST00000268957 WDR97A6NE52 1622 aa17.74■□□□□ 0.43
TOB1-201ENST00000268957 CHD1O14646 1710 aa17.7■□□□□ 0.42
TOB1-201ENST00000268957 FBLN2P98095 1184 aa17.69■□□□□ 0.42
TOB1-201ENST00000268957 RIMBP3CA6NJZ7 1639 aa17.67■□□□□ 0.42
TOB1-201ENST00000268957 RIMBP3BA6NNM3 1639 aa17.67■□□□□ 0.42
TOB1-201ENST00000268957 RIMBP3Q9UFD9 1639 aa17.67■□□□□ 0.42
TOB1-201ENST00000268957 ARHGEF11O15085 1522 aa17.65■□□□□ 0.42
TOB1-201ENST00000268957 GRIN2BQ13224 1484 aa17.64■□□□□ 0.41
TOB1-201ENST00000268957 SNAPC4Q5SXM2 1469 aa17.63■□□□□ 0.41
TOB1-201ENST00000268957 MAGI1Q96QZ7 1491 aaPredicted RBP17.63■□□□□ 0.41
TOB1-201ENST00000268957 ABCA10Q8WWZ4 1543 aa17.61■□□□□ 0.41
TOB1-201ENST00000268957 CHMP7Q8WUX9 453 aaPredicted RBP17.61■□□□□ 0.41
TOB1-201ENST00000268957 GAPVD1Q14C86 1478 aa17.6■□□□□ 0.41
TOB1-201ENST00000268957 WRNQ14191 1432 aaPredicted RBP eCLIP17.6■□□□□ 0.41
TOB1-201ENST00000268957 TOP2BQ02880 1626 aa17.59■□□□□ 0.41
TOB1-201ENST00000268957 BIVM-ERCC5R4GMW8 1640 aa17.59■□□□□ 0.41
TOB1-201ENST00000268957 PBRM1Q86U86 1689 aa17.57■□□□□ 0.4
TOB1-201ENST00000268957 SYNJ2O15056 1496 aa17.56■□□□□ 0.4
TOB1-201ENST00000268957 ABCA5Q8WWZ7 1642 aa17.55■□□□□ 0.4
TOB1-201ENST00000268957 SYNJ1O43426 1573 aa17.54■□□□□ 0.4
TOB1-201ENST00000268957 CYB5RLQ6IPT4 315 aa17.54■□□□□ 0.4
TOB1-201ENST00000268957 CLASP1Q7Z460 1538 aa17.48■□□□□ 0.39
TOB1-201ENST00000268957 ARAP1Q96P48 1450 aa17.48■□□□□ 0.39
TOB1-201ENST00000268957 ERICH3Q5RHP9 1530 aa17.41■□□□□ 0.38
TOB1-201ENST00000268957 GRIN2AQ12879 1464 aa17.4■□□□□ 0.38
TOB1-201ENST00000268957 ADAMTS12P58397 1594 aa17.4■□□□□ 0.38
TOB1-201ENST00000268957 FHAD1B1AJZ9 1412 aa17.39■□□□□ 0.38
TOB1-201ENST00000268957 NUP160Q12769 1436 aa17.33■□□□□ 0.37
TOB1-201ENST00000268957 TRHP20396 242 aaPredicted RBP17.32■□□□□ 0.36
TOB1-201ENST00000268957 CEP170Q5SW79 1584 aa17.31■□□□□ 0.36
TOB1-201ENST00000268957 KIF27Q86VH2 1401 aa17.27■□□□□ 0.36
TOB1-201ENST00000268957 SHROOM2Q13796 1616 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms