RNA–Protein interactions for RNA: ENST00000261881.8

TIPIN-201, Transcript of TIMELESS interacting protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TIPIN, Length 1,744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIPIN-201ENST00000261881 NISCHQ9Y2I1 1504 aa24.72■■□□□ 1.55
TIPIN-201ENST00000261881 CCDC180Q9P1Z9 1646 aa21.53■■□□□ 1.04
TIPIN-201ENST00000261881 ZCCHC6Q5VYS8 1495 aaKnown RBP20.81■□□□□ 0.92
TIPIN-201ENST00000261881 DCAF1Q9Y4B6 1507 aa20.49■□□□□ 0.87
TIPIN-201ENST00000261881 DCAF8L2P0C7V8 631 aa20.35■□□□□ 0.85
TIPIN-201ENST00000261881 SHROOM4Q9ULL8 1493 aa20.24■□□□□ 0.83
TIPIN-201ENST00000261881 MYO15BQ96JP2 1530 aa20.19■□□□□ 0.82
TIPIN-201ENST00000261881 ABCC9O60706 1549 aa20.14■□□□□ 0.81
TIPIN-201ENST00000261881 NACADO15069 1562 aa20.01■□□□□ 0.79
TIPIN-201ENST00000261881 RB1CC1Q8TDY2 1594 aa19.8■□□□□ 0.76
TIPIN-201ENST00000261881 SCRIBQ14160 1630 aa19.77■□□□□ 0.76
TIPIN-201ENST00000261881 SUPT5HO00267 1087 aaKnown RBP19.58■□□□□ 0.72
TIPIN-201ENST00000261881 UNC13AQ9UPW8 1703 aa19.33■□□□□ 0.68
TIPIN-201ENST00000261881 RSF1Q96T23 1441 aaPredicted RBP19.22■□□□□ 0.67
TIPIN-201ENST00000261881 CECR2Q9BXF3 1484 aa19.15■□□□□ 0.66
TIPIN-201ENST00000261881 BICRAQ9NZM4 1560 aa19.12■□□□□ 0.65
TIPIN-201ENST00000261881 BAZ1AQ9NRL2 1556 aaPredicted RBP19.11■□□□□ 0.65
TIPIN-201ENST00000261881 MROH2BQ7Z745 1585 aa19.08■□□□□ 0.64
TIPIN-201ENST00000261881 PABPN1Q86U42 306 aaKnown RBP eCLIP19■□□□□ 0.63
TIPIN-201ENST00000261881 SMARCA4P51532 1647 aa18.98■□□□□ 0.63
TIPIN-201ENST00000261881 WIZO95785 1651 aa18.93■□□□□ 0.62
TIPIN-201ENST00000261881 CHIC1Q5VXU3 224 aa18.83■□□□□ 0.6
TIPIN-201ENST00000261881 TOP2AP11388 1531 aaKnown RBP18.79■□□□□ 0.6
TIPIN-201ENST00000261881 PEG3Q9GZU2 1588 aa18.75■□□□□ 0.59
TIPIN-201ENST00000261881 SMARCA2P51531 1590 aa18.66■□□□□ 0.58
TIPIN-201ENST00000261881 ATAD2BQ9ULI0 1458 aa18.61■□□□□ 0.57
TIPIN-201ENST00000261881 EIF4G1Q04637 1599 aaKnown RBP18.57■□□□□ 0.56
TIPIN-201ENST00000261881 CCDC88BA6NC98 1476 aa18.57■□□□□ 0.56
TIPIN-201ENST00000261881 BAZ1BQ9UIG0 1483 aaKnown RBP18.55■□□□□ 0.56
TIPIN-201ENST00000261881 HMGXB3Q12766 1538 aa18.45■□□□□ 0.54
TIPIN-201ENST00000261881 TRIM41Q8WV44 630 aa18.44■□□□□ 0.54
TIPIN-201ENST00000261881 NCAPD3P42695 1498 aa18.44■□□□□ 0.54
TIPIN-201ENST00000261881 CC2D2AQ9P2K1 1620 aa18.24■□□□□ 0.51
TIPIN-201ENST00000261881 ABCC8Q09428 1581 aa18.21■□□□□ 0.51
TIPIN-201ENST00000261881 WRNQ14191 1432 aaPredicted RBP eCLIP18.13■□□□□ 0.49
TIPIN-201ENST00000261881 CFTRP13569 1480 aa18.07■□□□□ 0.48
TIPIN-201ENST00000261881 LOC105371045A0A1W2PR82 267 aa18.07■□□□□ 0.48
TIPIN-201ENST00000261881 FAM9AQ8IZU1 332 aaPredicted RBP18.06■□□□□ 0.48
TIPIN-201ENST00000261881 EEA1Q15075 1411 aa18.01■□□□□ 0.47
TIPIN-201ENST00000261881 PRDM2Q13029 1718 aa18.01■□□□□ 0.47
TIPIN-201ENST00000261881 SYNJ1O43426 1573 aa18.01■□□□□ 0.47
TIPIN-201ENST00000261881 CADPSQ9ULU8 1353 aa17.98■□□□□ 0.47
TIPIN-201ENST00000261881 TOP2BQ02880 1626 aa17.96■□□□□ 0.47
TIPIN-201ENST00000261881 BIVM-ERCC5R4GMW8 1640 aa17.94■□□□□ 0.46
TIPIN-201ENST00000261881 SOGA1O94964 1423 aa17.9■□□□□ 0.46
TIPIN-201ENST00000261881 CSRNP3Q8WYN3 585 aa17.84■□□□□ 0.45
TIPIN-201ENST00000261881 CUX1P39880 1505 aa17.83■□□□□ 0.45
TIPIN-201ENST00000261881 LAMC3Q9Y6N6 1575 aa17.81■□□□□ 0.44
TIPIN-201ENST00000261881 RUSC2Q8N2Y8 1516 aa17.8■□□□□ 0.44
TIPIN-201ENST00000261881 FANCD2Q9BXW9 1451 aa17.78■□□□□ 0.44
TIPIN-201ENST00000261881 EHMT2Q96KQ7 1210 aa17.76■□□□□ 0.43
TIPIN-201ENST00000261881 GOLGA3Q08378 1498 aa17.75■□□□□ 0.43
TIPIN-201ENST00000261881 KIF21BO75037 1637 aa17.73■□□□□ 0.43
TIPIN-201ENST00000261881 CEP164Q9UPV0 1460 aa17.73■□□□□ 0.43
TIPIN-201ENST00000261881 NESP48681 1621 aa17.71■□□□□ 0.43
TIPIN-201ENST00000261881 TNIKQ9UKE5 1360 aa17.7■□□□□ 0.42
TIPIN-201ENST00000261881 KIF27Q86VH2 1401 aa17.68■□□□□ 0.42
TIPIN-201ENST00000261881 PDS5BQ9NTI5 1447 aa17.68■□□□□ 0.42
TIPIN-201ENST00000261881 DNMBPQ6XZF7 1577 aa17.68■□□□□ 0.42
TIPIN-201ENST00000261881 FGD5Q6ZNL6 1462 aa17.64■□□□□ 0.41
TIPIN-201ENST00000261881 UBTFP17480 764 aaKnown RBP17.64■□□□□ 0.41
TIPIN-201ENST00000261881 CEP162Q5TB80 1403 aa17.6■□□□□ 0.41
TIPIN-201ENST00000261881 TOPBP1Q92547 1522 aa17.6■□□□□ 0.41
TIPIN-201ENST00000261881 DNAJC5BQ9UF47 199 aa17.6■□□□□ 0.41
TIPIN-201ENST00000261881 ERICH3Q5RHP9 1530 aa17.59■□□□□ 0.41
TIPIN-201ENST00000261881 CUX2O14529 1486 aa17.56■□□□□ 0.4
TIPIN-201ENST00000261881 PRXQ9BXM0 1461 aa17.56■□□□□ 0.4
TIPIN-201ENST00000261881 RAPGEF2Q9Y4G8 1499 aa17.55■□□□□ 0.4
TIPIN-201ENST00000261881 KIF21AQ7Z4S6 1674 aa17.53■□□□□ 0.4
TIPIN-201ENST00000261881 URB2Q14146 1524 aaKnown RBP17.52■□□□□ 0.4
TIPIN-201ENST00000261881 POLA1P09884 1462 aaPredicted RBP17.52■□□□□ 0.4
TIPIN-201ENST00000261881 ABCA10Q8WWZ4 1543 aa17.49■□□□□ 0.39
TIPIN-201ENST00000261881 TRIM26Q12899 539 aaPredicted RBP17.48■□□□□ 0.39
TIPIN-201ENST00000261881 PCGF6Q9BYE7 350 aa17.47■□□□□ 0.39
TIPIN-201ENST00000261881 CLIP1P30622 1438 aa17.45■□□□□ 0.38
TIPIN-201ENST00000261881 IGF1RP08069 1367 aa17.44■□□□□ 0.38
TIPIN-201ENST00000261881 RAD54L2Q9Y4B4 1467 aa17.44■□□□□ 0.38
TIPIN-201ENST00000261881 MRC2Q9UBG0 1479 aa17.43■□□□□ 0.38
TIPIN-201ENST00000261881 WDR97A6NE52 1622 aa17.42■□□□□ 0.38
TIPIN-201ENST00000261881 CARMIL1Q5VZK9 1371 aa17.39■□□□□ 0.37
TIPIN-201ENST00000261881 CUL7Q14999 1698 aa17.36■□□□□ 0.37
TIPIN-201ENST00000261881 ABCA5Q8WWZ7 1642 aa17.33■□□□□ 0.37
TIPIN-201ENST00000261881 WDR62O43379 1518 aa17.32■□□□□ 0.36
TIPIN-201ENST00000261881 VPS8Q8N3P4 1428 aa17.32■□□□□ 0.36
TIPIN-201ENST00000261881 TARBP1Q13395 1621 aaKnown RBP17.31■□□□□ 0.36
TIPIN-201ENST00000261881 ERCC6Q03468 1493 aa17.31■□□□□ 0.36
TIPIN-201ENST00000261881 GAPVD1Q14C86 1478 aa17.3■□□□□ 0.36
TIPIN-201ENST00000261881 TDRD9Q8NDG6 1382 aaKnown RBP17.26■□□□□ 0.35
TIPIN-201ENST00000261881 IFT140Q96RY7 1462 aa17.25■□□□□ 0.35
TIPIN-201ENST00000261881 RANGAP1P46060 587 aaPredicted RBP17.24■□□□□ 0.35
TIPIN-201ENST00000261881 ARAP1Q96P48 1450 aa17.23■□□□□ 0.35
TIPIN-201ENST00000261881 APLP2Q06481 763 aa17.21■□□□□ 0.35
TIPIN-201ENST00000261881 THOC2Q8NI27 1593 aaKnown RBP17.2■□□□□ 0.34
TIPIN-201ENST00000261881 PPARGC1BQ86YN6 1023 aaKnown RBP17.2■□□□□ 0.34
TIPIN-201ENST00000261881 ARHGAP35Q9NRY4 1499 aa17.19■□□□□ 0.34
TIPIN-201ENST00000261881 PBRM1Q86U86 1689 aa17.19■□□□□ 0.34
TIPIN-201ENST00000261881 CTTNBP2Q8WZ74 1663 aa17.17■□□□□ 0.34
TIPIN-201ENST00000261881 GRIN2BQ13224 1484 aa17.15■□□□□ 0.34
TIPIN-201ENST00000261881 EFCAB5A4FU69 1503 aa17.13■□□□□ 0.33
TIPIN-201ENST00000261881 FHAD1B1AJZ9 1412 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms