RNA–Protein interactions for RNA: ENST00000259030.2

RTP4-201, Transcript of receptor transporter protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTP4, Length 1,554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4-201ENST00000259030 NISCHQ9Y2I1 1504 aa26.71■■□□□ 1.87
RTP4-201ENST00000259030 ABCC9O60706 1549 aa23.93■■□□□ 1.42
RTP4-201ENST00000259030 CCDC180Q9P1Z9 1646 aa23.88■■□□□ 1.41
RTP4-201ENST00000259030 RB1CC1Q8TDY2 1594 aa22.71■■□□□ 1.23
RTP4-201ENST00000259030 DCAF8L2P0C7V8 631 aa22.65■■□□□ 1.22
RTP4-201ENST00000259030 NACADO15069 1562 aa22.54■■□□□ 1.2
RTP4-201ENST00000259030 DNAJC5BQ9UF47 199 aa22.39■■□□□ 1.18
RTP4-201ENST00000259030 PABPN1Q86U42 306 aaKnown RBP eCLIP22.33■■□□□ 1.17
RTP4-201ENST00000259030 UNC13AQ9UPW8 1703 aa22.29■■□□□ 1.16
RTP4-201ENST00000259030 MYO15BQ96JP2 1530 aa22.19■■□□□ 1.14
RTP4-201ENST00000259030 ZCCHC6Q5VYS8 1495 aaKnown RBP22.16■■□□□ 1.14
RTP4-201ENST00000259030 BICRAQ9NZM4 1560 aa22.1■■□□□ 1.13
RTP4-201ENST00000259030 DCAF1Q9Y4B6 1507 aa21.97■■□□□ 1.11
RTP4-201ENST00000259030 SCRIBQ14160 1630 aa21.91■■□□□ 1.1
RTP4-201ENST00000259030 AEBP2Q6ZN18 517 aaPredicted RBP21.78■■□□□ 1.08
RTP4-201ENST00000259030 SHROOM4Q9ULL8 1493 aa21.64■■□□□ 1.05
RTP4-201ENST00000259030 CC2D2AQ9P2K1 1620 aa21.58■■□□□ 1.04
RTP4-201ENST00000259030 EIF4G1Q04637 1599 aaKnown RBP21.53■■□□□ 1.04
RTP4-201ENST00000259030 CECR2Q9BXF3 1484 aa21.49■■□□□ 1.03
RTP4-201ENST00000259030 CHIC1Q5VXU3 224 aa21.4■■□□□ 1.02
RTP4-201ENST00000259030 SMARCA4P51532 1647 aa20.84■□□□□ 0.93
RTP4-201ENST00000259030 NCAPD3P42695 1498 aa20.82■□□□□ 0.92
RTP4-201ENST00000259030 ATAD2BQ9ULI0 1458 aa20.82■□□□□ 0.92
RTP4-201ENST00000259030 SMARCA2P51531 1590 aa20.72■□□□□ 0.91
RTP4-201ENST00000259030 BAZ1AQ9NRL2 1556 aaPredicted RBP20.71■□□□□ 0.91
RTP4-201ENST00000259030 HMGXB3Q12766 1538 aa20.68■□□□□ 0.9
RTP4-201ENST00000259030 MROH2BQ7Z745 1585 aa20.65■□□□□ 0.9
RTP4-201ENST00000259030 BAZ1BQ9UIG0 1483 aaKnown RBP20.64■□□□□ 0.89
RTP4-201ENST00000259030 ERCC6Q03468 1493 aa20.61■□□□□ 0.89
RTP4-201ENST00000259030 NESP48681 1621 aa20.6■□□□□ 0.89
RTP4-201ENST00000259030 PEG3Q9GZU2 1588 aa20.56■□□□□ 0.88
RTP4-201ENST00000259030 CUX2O14529 1486 aa20.45■□□□□ 0.86
RTP4-201ENST00000259030 WIZO95785 1651 aa20.43■□□□□ 0.86
RTP4-201ENST00000259030 DNAJC5Q9H3Z4 198 aa20.38■□□□□ 0.85
RTP4-201ENST00000259030 LAMC3Q9Y6N6 1575 aa20.35■□□□□ 0.85
RTP4-201ENST00000259030 KIF21AQ7Z4S6 1674 aa20.32■□□□□ 0.84
RTP4-201ENST00000259030 THOC2Q8NI27 1593 aaKnown RBP20.3■□□□□ 0.84
RTP4-201ENST00000259030 RSF1Q96T23 1441 aaPredicted RBP20.22■□□□□ 0.83
RTP4-201ENST00000259030 PDS5BQ9NTI5 1447 aa20.22■□□□□ 0.83
RTP4-201ENST00000259030 CADPSQ9ULU8 1353 aa20.22■□□□□ 0.83
RTP4-201ENST00000259030 TOP2AP11388 1531 aaKnown RBP20.1■□□□□ 0.81
RTP4-201ENST00000259030 MRC2Q9UBG0 1479 aa20.08■□□□□ 0.8
RTP4-201ENST00000259030 FANCD2Q9BXW9 1451 aa20.03■□□□□ 0.8
RTP4-201ENST00000259030 CEP164Q9UPV0 1460 aa20.03■□□□□ 0.8
RTP4-201ENST00000259030 WDR62O43379 1518 aa20.01■□□□□ 0.79
RTP4-201ENST00000259030 CFTRP13569 1480 aa20.01■□□□□ 0.79
RTP4-201ENST00000259030 CCDC88BA6NC98 1476 aa19.91■□□□□ 0.78
RTP4-201ENST00000259030 URB2Q14146 1524 aaKnown RBP19.88■□□□□ 0.77
RTP4-201ENST00000259030 PRDM2Q13029 1718 aa19.82■□□□□ 0.76
RTP4-201ENST00000259030 TOPBP1Q92547 1522 aa19.66■□□□□ 0.74
RTP4-201ENST00000259030 TRIM41Q8WV44 630 aa19.66■□□□□ 0.74
RTP4-201ENST00000259030 ZNF608Q9ULD9 1512 aaPredicted RBP19.65■□□□□ 0.74
RTP4-201ENST00000259030 IFT140Q96RY7 1462 aa19.59■□□□□ 0.73
RTP4-201ENST00000259030 DNMBPQ6XZF7 1577 aa19.57■□□□□ 0.72
RTP4-201ENST00000259030 OSCARQ8IYS5 282 aa19.57■□□□□ 0.72
RTP4-201ENST00000259030 EIF4G3O43432 1585 aaKnown RBP19.52■□□□□ 0.72
RTP4-201ENST00000259030 ABCC8Q09428 1581 aa19.52■□□□□ 0.71
RTP4-201ENST00000259030 SUPT5HO00267 1087 aaKnown RBP19.51■□□□□ 0.71
RTP4-201ENST00000259030 AQRO60306 1485 aaKnown RBP eCLIP19.48■□□□□ 0.71
RTP4-201ENST00000259030 POLA1P09884 1462 aaPredicted RBP19.47■□□□□ 0.71
RTP4-201ENST00000259030 TARBP1Q13395 1621 aaKnown RBP19.47■□□□□ 0.71
RTP4-201ENST00000259030 RAD54L2Q9Y4B4 1467 aa19.45■□□□□ 0.7
RTP4-201ENST00000259030 CUX1P39880 1505 aa19.38■□□□□ 0.69
RTP4-201ENST00000259030 FGD5Q6ZNL6 1462 aa19.38■□□□□ 0.69
RTP4-201ENST00000259030 SOGA1O94964 1423 aa19.38■□□□□ 0.69
RTP4-201ENST00000259030 CHD1O14646 1710 aa19.37■□□□□ 0.69
RTP4-201ENST00000259030 TDRD9Q8NDG6 1382 aaKnown RBP19.37■□□□□ 0.69
RTP4-201ENST00000259030 RIMBP3CA6NJZ7 1639 aa19.37■□□□□ 0.69
RTP4-201ENST00000259030 RIMBP3BA6NNM3 1639 aa19.37■□□□□ 0.69
RTP4-201ENST00000259030 RIMBP3Q9UFD9 1639 aa19.37■□□□□ 0.69
RTP4-201ENST00000259030 FBLN2P98095 1184 aa19.36■□□□□ 0.69
RTP4-201ENST00000259030 ARHGEF11O15085 1522 aa19.3■□□□□ 0.68
RTP4-201ENST00000259030 SNAPC4Q5SXM2 1469 aa19.27■□□□□ 0.68
RTP4-201ENST00000259030 WDR97A6NE52 1622 aa19.21■□□□□ 0.67
RTP4-201ENST00000259030 CYB5RLQ6IPT4 315 aa19.19■□□□□ 0.66
RTP4-201ENST00000259030 CHMP7Q8WUX9 453 aaPredicted RBP19.17■□□□□ 0.66
RTP4-201ENST00000259030 GRIN2BQ13224 1484 aa19.17■□□□□ 0.66
RTP4-201ENST00000259030 PBRM1Q86U86 1689 aa19.15■□□□□ 0.66
RTP4-201ENST00000259030 MAGI1Q96QZ7 1491 aaPredicted RBP19.15■□□□□ 0.66
RTP4-201ENST00000259030 GAPVD1Q14C86 1478 aa19.14■□□□□ 0.65
RTP4-201ENST00000259030 ARAP1Q96P48 1450 aa19.13■□□□□ 0.65
RTP4-201ENST00000259030 ABCA10Q8WWZ4 1543 aa19.11■□□□□ 0.65
RTP4-201ENST00000259030 ABCA5Q8WWZ7 1642 aa19.11■□□□□ 0.65
RTP4-201ENST00000259030 SYNJ1O43426 1573 aa19.1■□□□□ 0.65
RTP4-201ENST00000259030 CLASP1Q7Z460 1538 aa19.1■□□□□ 0.65
RTP4-201ENST00000259030 SYNJ2O15056 1496 aa19.1■□□□□ 0.65
RTP4-201ENST00000259030 WRNQ14191 1432 aaPredicted RBP eCLIP19.06■□□□□ 0.64
RTP4-201ENST00000259030 TOP2BQ02880 1626 aa19.05■□□□□ 0.64
RTP4-201ENST00000259030 BIVM-ERCC5R4GMW8 1640 aa19.05■□□□□ 0.64
RTP4-201ENST00000259030 TRHP20396 242 aaPredicted RBP18.97■□□□□ 0.63
RTP4-201ENST00000259030 ADAMTS12P58397 1594 aa18.96■□□□□ 0.63
RTP4-201ENST00000259030 GRIN2AQ12879 1464 aa18.94■□□□□ 0.62
RTP4-201ENST00000259030 CEP170Q5SW79 1584 aa18.92■□□□□ 0.62
RTP4-201ENST00000259030 ERCC6L2Q5T890 1561 aa18.91■□□□□ 0.62
RTP4-201ENST00000259030 FHAD1B1AJZ9 1412 aa18.87■□□□□ 0.61
RTP4-201ENST00000259030 ERICH3Q5RHP9 1530 aa18.85■□□□□ 0.61
RTP4-201ENST00000259030 NUP160Q12769 1436 aa18.85■□□□□ 0.61
RTP4-201ENST00000259030 PHF23Q9BUL5 403 aaPredicted RBP18.76■□□□□ 0.59
RTP4-201ENST00000259030 SHROOM2Q13796 1616 aa18.76■□□□□ 0.59
RTP4-201ENST00000259030 PRG4Q92954 1404 aaPredicted RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms