RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 NISCHQ9Y2I1 1504 aa32.18■■■□□ 2.74
APOBEC3A-201ENST00000249116 CCDC180Q9P1Z9 1646 aa28.86■■■□□ 2.21
APOBEC3A-201ENST00000249116 ABCC9O60706 1549 aa28.82■■■□□ 2.2
APOBEC3A-201ENST00000249116 AEBP2Q6ZN18 517 aaPredicted RBP28.31■■■□□ 2.12
APOBEC3A-201ENST00000249116 RB1CC1Q8TDY2 1594 aa27.48■■□□□ 1.99
APOBEC3A-201ENST00000249116 NACADO15069 1562 aa27.3■■□□□ 1.96
APOBEC3A-201ENST00000249116 DCAF8L2P0C7V8 631 aa27.2■■□□□ 1.94
APOBEC3A-201ENST00000249116 CHIC1Q5VXU3 224 aa27.03■■□□□ 1.92
APOBEC3A-201ENST00000249116 DNAJC5BQ9UF47 199 aa26.97■■□□□ 1.91
APOBEC3A-201ENST00000249116 MYO15BQ96JP2 1530 aa26.95■■□□□ 1.9
APOBEC3A-201ENST00000249116 PABPN1Q86U42 306 aaKnown RBP eCLIP26.85■■□□□ 1.89
APOBEC3A-201ENST00000249116 UNC13AQ9UPW8 1703 aa26.76■■□□□ 1.87
APOBEC3A-201ENST00000249116 ZCCHC6Q5VYS8 1495 aaKnown RBP26.68■■□□□ 1.86
APOBEC3A-201ENST00000249116 BICRAQ9NZM4 1560 aa26.62■■□□□ 1.85
APOBEC3A-201ENST00000249116 DCAF1Q9Y4B6 1507 aa26.6■■□□□ 1.85
APOBEC3A-201ENST00000249116 SHROOM4Q9ULL8 1493 aa26.34■■□□□ 1.81
APOBEC3A-201ENST00000249116 SCRIBQ14160 1630 aa26.28■■□□□ 1.8
APOBEC3A-201ENST00000249116 CC2D2AQ9P2K1 1620 aa26.03■■□□□ 1.76
APOBEC3A-201ENST00000249116 EIF4G1Q04637 1599 aaKnown RBP25.99■■□□□ 1.75
APOBEC3A-201ENST00000249116 CECR2Q9BXF3 1484 aa25.98■■□□□ 1.75
APOBEC3A-201ENST00000249116 NCAPD3P42695 1498 aa25.2■■□□□ 1.62
APOBEC3A-201ENST00000249116 ATAD2BQ9ULI0 1458 aa25.11■■□□□ 1.61
APOBEC3A-201ENST00000249116 SMARCA4P51532 1647 aa25.08■■□□□ 1.61
APOBEC3A-201ENST00000249116 SMARCA2P51531 1590 aa25.07■■□□□ 1.6
APOBEC3A-201ENST00000249116 HMGXB3Q12766 1538 aa25.02■■□□□ 1.6
APOBEC3A-201ENST00000249116 BAZ1AQ9NRL2 1556 aaPredicted RBP25■■□□□ 1.59
APOBEC3A-201ENST00000249116 ERCC6Q03468 1493 aa24.93■■□□□ 1.58
APOBEC3A-201ENST00000249116 BAZ1BQ9UIG0 1483 aaKnown RBP24.9■■□□□ 1.58
APOBEC3A-201ENST00000249116 CUX2O14529 1486 aa24.87■■□□□ 1.57
APOBEC3A-201ENST00000249116 PEG3Q9GZU2 1588 aa24.84■■□□□ 1.57
APOBEC3A-201ENST00000249116 DNAJC5Q9H3Z4 198 aa24.79■■□□□ 1.56
APOBEC3A-201ENST00000249116 MROH2BQ7Z745 1585 aa24.78■■□□□ 1.56
APOBEC3A-201ENST00000249116 NESP48681 1621 aa24.75■■□□□ 1.55
APOBEC3A-201ENST00000249116 LAMC3Q9Y6N6 1575 aa24.63■■□□□ 1.53
APOBEC3A-201ENST00000249116 PDS5BQ9NTI5 1447 aa24.51■■□□□ 1.51
APOBEC3A-201ENST00000249116 THOC2Q8NI27 1593 aaKnown RBP24.49■■□□□ 1.51
APOBEC3A-201ENST00000249116 WIZO95785 1651 aa24.47■■□□□ 1.51
APOBEC3A-201ENST00000249116 CADPSQ9ULU8 1353 aa24.45■■□□□ 1.5
APOBEC3A-201ENST00000249116 KIF21AQ7Z4S6 1674 aa24.42■■□□□ 1.5
APOBEC3A-201ENST00000249116 RSF1Q96T23 1441 aaPredicted RBP24.3■■□□□ 1.48
APOBEC3A-201ENST00000249116 MRC2Q9UBG0 1479 aa24.28■■□□□ 1.48
APOBEC3A-201ENST00000249116 SENP3Q9H4L4 574 aaPredicted RBP24.25■■□□□ 1.47
APOBEC3A-201ENST00000249116 TOP2AP11388 1531 aaKnown RBP24.2■■□□□ 1.46
APOBEC3A-201ENST00000249116 CEP164Q9UPV0 1460 aa24.19■■□□□ 1.46
APOBEC3A-201ENST00000249116 WDR62O43379 1518 aa24.19■■□□□ 1.46
APOBEC3A-201ENST00000249116 CFTRP13569 1480 aa24.16■■□□□ 1.46
APOBEC3A-201ENST00000249116 FANCD2Q9BXW9 1451 aa24.15■■□□□ 1.46
APOBEC3A-201ENST00000249116 URB2Q14146 1524 aaKnown RBP23.92■■□□□ 1.42
APOBEC3A-201ENST00000249116 CCDC88BA6NC98 1476 aa23.92■■□□□ 1.42
APOBEC3A-201ENST00000249116 PHF23Q9BUL5 403 aaPredicted RBP23.89■■□□□ 1.41
APOBEC3A-201ENST00000249116 PRDM2Q13029 1718 aa23.87■■□□□ 1.41
APOBEC3A-201ENST00000249116 OSCARQ8IYS5 282 aa23.76■■□□□ 1.39
APOBEC3A-201ENST00000249116 TRIM41Q8WV44 630 aa23.74■■□□□ 1.39
APOBEC3A-201ENST00000249116 IFT140Q96RY7 1462 aa23.71■■□□□ 1.39
APOBEC3A-201ENST00000249116 ABCC8Q09428 1581 aa23.69■■□□□ 1.38
APOBEC3A-201ENST00000249116 TOPBP1Q92547 1522 aa23.69■■□□□ 1.38
APOBEC3A-201ENST00000249116 ZNF608Q9ULD9 1512 aaPredicted RBP23.62■■□□□ 1.37
APOBEC3A-201ENST00000249116 DNMBPQ6XZF7 1577 aa23.61■■□□□ 1.37
APOBEC3A-201ENST00000249116 EIF4G3O43432 1585 aaKnown RBP23.5■■□□□ 1.35
APOBEC3A-201ENST00000249116 TARBP1Q13395 1621 aaKnown RBP23.45■■□□□ 1.35
APOBEC3A-201ENST00000249116 POLA1P09884 1462 aaPredicted RBP23.45■■□□□ 1.34
APOBEC3A-201ENST00000249116 AQRO60306 1485 aaKnown RBP eCLIP23.43■■□□□ 1.34
APOBEC3A-201ENST00000249116 RIMBP3CA6NJZ7 1639 aa23.38■■□□□ 1.33
APOBEC3A-201ENST00000249116 RIMBP3BA6NNM3 1639 aa23.38■■□□□ 1.33
APOBEC3A-201ENST00000249116 RIMBP3Q9UFD9 1639 aa23.38■■□□□ 1.33
APOBEC3A-201ENST00000249116 SOGA1O94964 1423 aa23.38■■□□□ 1.33
APOBEC3A-201ENST00000249116 RAD54L2Q9Y4B4 1467 aa23.36■■□□□ 1.33
APOBEC3A-201ENST00000249116 ARHGEF11O15085 1522 aa23.32■■□□□ 1.32
APOBEC3A-201ENST00000249116 FGD5Q6ZNL6 1462 aa23.32■■□□□ 1.32
APOBEC3A-201ENST00000249116 FBLN2P98095 1184 aa23.32■■□□□ 1.32
APOBEC3A-201ENST00000249116 TDRD9Q8NDG6 1382 aaKnown RBP23.31■■□□□ 1.32
APOBEC3A-201ENST00000249116 CHD1O14646 1710 aa23.29■■□□□ 1.32
APOBEC3A-201ENST00000249116 SUPT5HO00267 1087 aaKnown RBP23.28■■□□□ 1.32
APOBEC3A-201ENST00000249116 CUX1P39880 1505 aa23.28■■□□□ 1.32
APOBEC3A-201ENST00000249116 WDR97A6NE52 1622 aa23.27■■□□□ 1.32
APOBEC3A-201ENST00000249116 SNAPC4Q5SXM2 1469 aa23.2■■□□□ 1.3
APOBEC3A-201ENST00000249116 CYB5RLQ6IPT4 315 aa23.17■■□□□ 1.3
APOBEC3A-201ENST00000249116 CHMP7Q8WUX9 453 aaPredicted RBP23.16■■□□□ 1.3
APOBEC3A-201ENST00000249116 GRIN2BQ13224 1484 aa23.16■■□□□ 1.3
APOBEC3A-201ENST00000249116 MAGI1Q96QZ7 1491 aaPredicted RBP23.16■■□□□ 1.3
APOBEC3A-201ENST00000249116 ARAP1Q96P48 1450 aa23.09■■□□□ 1.29
APOBEC3A-201ENST00000249116 SYNJ1O43426 1573 aa23.08■■□□□ 1.29
APOBEC3A-201ENST00000249116 SYNJ2O15056 1496 aa23.08■■□□□ 1.29
APOBEC3A-201ENST00000249116 GAPVD1Q14C86 1478 aa23.08■■□□□ 1.29
APOBEC3A-201ENST00000249116 ABCA10Q8WWZ4 1543 aa23.06■■□□□ 1.28
APOBEC3A-201ENST00000249116 CLASP1Q7Z460 1538 aa23.06■■□□□ 1.28
APOBEC3A-201ENST00000249116 PBRM1Q86U86 1689 aa23.03■■□□□ 1.28
APOBEC3A-201ENST00000249116 WRNQ14191 1432 aaPredicted RBP eCLIP23■■□□□ 1.27
APOBEC3A-201ENST00000249116 ABCA5Q8WWZ7 1642 aa23■■□□□ 1.27
APOBEC3A-201ENST00000249116 TRHP20396 242 aaPredicted RBP22.94■■□□□ 1.26
APOBEC3A-201ENST00000249116 TOP2BQ02880 1626 aa22.94■■□□□ 1.26
APOBEC3A-201ENST00000249116 BIVM-ERCC5R4GMW8 1640 aa22.92■■□□□ 1.26
APOBEC3A-201ENST00000249116 GRIN2AQ12879 1464 aa22.85■■□□□ 1.25
APOBEC3A-201ENST00000249116 ADAMTS12P58397 1594 aa22.83■■□□□ 1.25
APOBEC3A-201ENST00000249116 FHAD1B1AJZ9 1412 aa22.8■■□□□ 1.24
APOBEC3A-201ENST00000249116 ERICH3Q5RHP9 1530 aa22.78■■□□□ 1.24
APOBEC3A-201ENST00000249116 NUP160Q12769 1436 aa22.77■■□□□ 1.24
APOBEC3A-201ENST00000249116 CEP170Q5SW79 1584 aa22.74■■□□□ 1.23
APOBEC3A-201ENST00000249116 ERCC6L2Q5T890 1561 aa22.67■■□□□ 1.22
APOBEC3A-201ENST00000249116 SHROOM2Q13796 1616 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms