RNA–Protein interactions for RNA: YMR154C

RIM13, Transcript of Calpain-like cysteine protease, yeast

Gene RIM13, Length 2,184 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIM13	YMR154C	GCV1	P48015	400 aa		4.25	□□□□□ -1.73
RIM13	YMR154C	TYW3	P53177	273 aa		4.25	□□□□□ -1.73
RIM13	YMR154C	MEC3	Q02574	474 aa		4.25	□□□□□ -1.73
RIM13	YMR154C	YLR225C	Q05948	407 aa	Known RBP	4.25	□□□□□ -1.73
RIM13	YMR154C	EST2	Q06163	884 aa		4.25	□□□□□ -1.73
RIM13	YMR154C	REI1	P38344	393 aa	Predicted RBP	4.24	□□□□□ -1.73
RIM13	YMR154C	NMD3	P38861	518 aa	Known RBP	4.24	□□□□□ -1.73
RIM13	YMR154C	BOI2	P39969	1040 aa		4.24	□□□□□ -1.73
RIM13	YMR154C	YNR014W	P53719	212 aa		4.24	□□□□□ -1.73
RIM13	YMR154C	YMR074C	Q04773	145 aa		4.24	□□□□□ -1.73
RIM13	YMR154C	PPM2	Q08282	695 aa		4.24	□□□□□ -1.73
RIM13	YMR154C	YPL066W	Q12194	479 aa		4.24	□□□□□ -1.73
RIM13	YMR154C	CIT2	P08679	460 aa		4.24	□□□□□ -1.73
RIM13	YMR154C	SAC7	P17121	654 aa		4.24	□□□□□ -1.73
RIM13	YMR154C	NCE103	P53615	221 aa		4.24	□□□□□ -1.73
RIM13	YMR154C	TIF35	Q04067	274 aa	Known RBP	4.24	□□□□□ -1.73
RIM13	YMR154C	AOS1	Q06624	347 aa		4.24	□□□□□ -1.73
RIM13	YMR154C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
RIM13	YMR154C	AGP1	P25376	633 aa		4.23	□□□□□ -1.73
RIM13	YMR154C	TRK2	P28584	889 aa		4.23	□□□□□ -1.73
RIM13	YMR154C	LYP1	P32487	611 aa		4.23	□□□□□ -1.73
RIM13	YMR154C	ADD66	P36040	267 aa		4.23	□□□□□ -1.73
RIM13	YMR154C	TDA5	Q06417	326 aa	Known RBP	4.23	□□□□□ -1.73
RIM13	YMR154C	TDA6	Q06466	467 aa		4.23	□□□□□ -1.73
RIM13	YMR154C	THI72	Q08579	599 aa		4.23	□□□□□ -1.73
RIM13	YMR154C	TY1A-NL1	Q12391	440 aa	Known RBP	4.23	□□□□□ -1.73
RIM13	YMR154C	RAD27	P26793	382 aa		4.23	□□□□□ -1.73
RIM13	YMR154C	SRP40	P32583	406 aa	Predicted RBP	4.23	□□□□□ -1.73
RIM13	YMR154C	HUL5	P53119	910 aa		4.23	□□□□□ -1.73
RIM13	YMR154C	ELA1	P53861	379 aa	Predicted RBP	4.23	□□□□□ -1.73
RIM13	YMR154C	RKM2	Q03942	479 aa		4.23	□□□□□ -1.73
RIM13	YMR154C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
RIM13	YMR154C	PRY1	P47032	299 aa		4.22	□□□□□ -1.73
RIM13	YMR154C	YGR045C	P53229	120 aa		4.22	□□□□□ -1.73
RIM13	YMR154C	YPL062W	Q02781	134 aa		4.22	□□□□□ -1.73
RIM13	YMR154C	SHE9	Q04172	456 aa		4.22	□□□□□ -1.73
RIM13	YMR154C	RAD4	P14736	754 aa		4.21	□□□□□ -1.73
RIM13	YMR154C	SYP1	P25623	870 aa	Known RBP	4.21	□□□□□ -1.73
RIM13	YMR154C	MAE1	P36013	669 aa	Known RBP	4.21	□□□□□ -1.73
RIM13	YMR154C	ALG3	P38179	458 aa		4.21	□□□□□ -1.73
RIM13	YMR154C	PFD1	P46988	109 aa		4.21	□□□□□ -1.73
RIM13	YMR154C	MTR4	P47047	1073 aa	Known RBP	4.21	□□□□□ -1.73
RIM13	YMR154C	DOS2	P54858	310 aa		4.21	□□□□□ -1.73
RIM13	YMR154C	YKL091C	P33324	310 aa	Known RBP	4.21	□□□□□ -1.74
RIM13	YMR154C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
RIM13	YMR154C	SLN1	P39928	1220 aa	Predicted RBP	4.21	□□□□□ -1.74
RIM13	YMR154C	MPH1	P40562	993 aa		4.21	□□□□□ -1.74
RIM13	YMR154C	BUD9	P53226	547 aa		4.21	□□□□□ -1.74
RIM13	YMR154C	NAN1	Q02931	896 aa	Known RBP	4.21	□□□□□ -1.74
RIM13	YMR154C	CDC53	Q12018	815 aa	Known RBP	4.21	□□□□□ -1.74
RIM13	YMR154C	AI1	P03875	834 aa		4.2	□□□□□ -1.74
RIM13	YMR154C	INO1	P11986	533 aa		4.2	□□□□□ -1.74
RIM13	YMR154C	DBP5	P20449	482 aa	Known RBP	4.2	□□□□□ -1.74
RIM13	YMR154C	SBA1	P28707	216 aa	Known RBP	4.2	□□□□□ -1.74
RIM13	YMR154C	VBA5	P36172	582 aa		4.2	□□□□□ -1.74
RIM13	YMR154C	YBR184W	P38299	523 aa		4.2	□□□□□ -1.74
RIM13	YMR154C	YAR028W	P39548	234 aa		4.2	□□□□□ -1.74
RIM13	YMR154C	RNH70	P53331	553 aa		4.2	□□□□□ -1.74
RIM13	YMR154C	GPT2	P36148	743 aa		4.2	□□□□□ -1.74
RIM13	YMR154C	NMD2	P38798	1089 aa	Known RBP	4.2	□□□□□ -1.74
RIM13	YMR154C	CNN1	P43618	361 aa		4.2	□□□□□ -1.74
RIM13	YMR154C	DSE4	P53753	1117 aa		4.2	□□□□□ -1.74
RIM13	YMR154C	DOT1	Q04089	582 aa	Known RBP	4.2	□□□□□ -1.74
RIM13	YMR154C	YCK2	P23292	546 aa	Known RBP	4.19	□□□□□ -1.74
RIM13	YMR154C	MLS1	P30952	554 aa		4.19	□□□□□ -1.74
RIM13	YMR154C	SPC42	P36094	363 aa		4.19	□□□□□ -1.74
RIM13	YMR154C	MCM7	P38132	845 aa		4.19	□□□□□ -1.74
RIM13	YMR154C	FAR11	P53917	953 aa		4.19	□□□□□ -1.74
RIM13	YMR154C	EAR1	Q03212	550 aa		4.19	□□□□□ -1.74
RIM13	YMR154C	SPO20	Q04359	397 aa		4.19	□□□□□ -1.74
RIM13	YMR154C	YOR223W	Q12015	292 aa		4.19	□□□□□ -1.74
RIM13	YMR154C	MBP1	P39678	833 aa		4.19	□□□□□ -1.74
RIM13	YMR154C	GPB2	P39717	880 aa		4.19	□□□□□ -1.74
RIM13	YMR154C	IRR1	P40541	1150 aa		4.19	□□□□□ -1.74
RIM13	YMR154C	YFL054C	P43549	646 aa		4.19	□□□□□ -1.74
RIM13	YMR154C	YGL176C	P46945	554 aa		4.19	□□□□□ -1.74
RIM13	YMR154C	NSG2	P53898	299 aa		4.19	□□□□□ -1.74
RIM13	YMR154C	PTC5	Q12511	572 aa		4.19	□□□□□ -1.74
RIM13	YMR154C	RPL8B	P29453	256 aa	Known RBP	4.18	□□□□□ -1.74
RIM13	YMR154C	NAM7	P30771	971 aa	Known RBP	4.18	□□□□□ -1.74
RIM13	YMR154C	SIP5	P40210	489 aa	Known RBP	4.18	□□□□□ -1.74
RIM13	YMR154C	MSH4	P40965	878 aa	Predicted RBP	4.18	□□□□□ -1.74
RIM13	YMR154C	TIM54	P47045	478 aa		4.18	□□□□□ -1.74
RIM13	YMR154C	FMP25	Q08023	583 aa		4.18	□□□□□ -1.74
RIM13	YMR154C	AVO1	Q08236	1176 aa		4.18	□□□□□ -1.74
RIM13	YMR154C	MCA1	Q08601	432 aa		4.18	□□□□□ -1.74
RIM13	YMR154C	FLC1	Q08967	793 aa		4.18	□□□□□ -1.74
RIM13	YMR154C	YDR215C	Q12240	137 aa		4.18	□□□□□ -1.74
RIM13	YMR154C	RKM4	Q12504	494 aa		4.18	□□□□□ -1.74
RIM13	YMR154C	MRP8	P35719	219 aa		4.17	□□□□□ -1.74
RIM13	YMR154C	RSA3	Q05942	220 aa	Known RBP	4.17	□□□□□ -1.74
RIM13	YMR154C	SBP1	P10080	294 aa	Known RBP	4.17	□□□□□ -1.74
RIM13	YMR154C	RGD1	P38339	666 aa		4.17	□□□□□ -1.74
RIM13	YMR154C	ALG12	P53730	551 aa		4.17	□□□□□ -1.74
RIM13	YMR154C	AI3	P03877	415 aa		4.16	□□□□□ -1.74
RIM13	YMR154C	YER152C	P10356	443 aa		4.16	□□□□□ -1.74
RIM13	YMR154C	RET1	P22276	1149 aa	Known RBP	4.16	□□□□□ -1.74
RIM13	YMR154C	RSP5	P39940	809 aa	Known RBP	4.16	□□□□□ -1.74
RIM13	YMR154C	DBP2	P24783	546 aa	Known RBP	4.16	□□□□□ -1.74
RIM13	YMR154C	KIP1	P28742	1111 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms