RNA–Protein interactions for RNA: YLR447C

VMA6, Transcript of Subunit d of the V0 integral membrane domain of V-ATPase, yeastyeast

Gene VMA6, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA6YLR447C XKS1P42826 600 aa6.27□□□□□ -1.41
VMA6YLR447C PHO4P07270 312 aaKnown RBP6.26□□□□□ -1.41
VMA6YLR447C YNR063WP53749 607 aa6.26□□□□□ -1.41
VMA6YLR447C LPX1Q12405 387 aaKnown RBP6.26□□□□□ -1.41
VMA6YLR447C PPX1P38698 397 aa6.25□□□□□ -1.41
VMA6YLR447C NMD3P38861 518 aaKnown RBP6.25□□□□□ -1.41
VMA6YLR447C THI12P42883 340 aa6.25□□□□□ -1.41
VMA6YLR447C THI5P43534 340 aa6.25□□□□□ -1.41
VMA6YLR447C THI11P47183 340 aa6.25□□□□□ -1.41
VMA6YLR447C ULP1Q02724 621 aa6.25□□□□□ -1.41
VMA6YLR447C RSA3Q05942 220 aaKnown RBP6.25□□□□□ -1.41
VMA6YLR447C CDA2Q06703 312 aa6.25□□□□□ -1.41
VMA6YLR447C THI13Q07748 340 aa6.25□□□□□ -1.41
VMA6YLR447C SCP160P06105 1222 aaKnown RBP RIP-Chip data6.24□□□□□ -1.41 RIP-Chip
VMA6YLR447C MDL2P33311 773 aa6.24□□□□□ -1.41
VMA6YLR447C YKL222CP35995 705 aa6.24□□□□□ -1.41
VMA6YLR447C SSF1P38789 453 aaPredicted RBP6.24□□□□□ -1.41
VMA6YLR447C TSA1P34760 196 aaKnown RBP6.23□□□□□ -1.41
VMA6YLR447C PEX28P38848 579 aa6.23□□□□□ -1.41
VMA6YLR447C MSC6Q08818 692 aaKnown RBP6.23□□□□□ -1.41
VMA6YLR447C UGA4P32837 571 aa6.22□□□□□ -1.41
VMA6YLR447C ADD66P36040 267 aa6.22□□□□□ -1.41
VMA6YLR447C DAK2P43550 591 aa6.22□□□□□ -1.41
VMA6YLR447C VPS53P47061 822 aa6.22□□□□□ -1.41
VMA6YLR447C MRPL22P53881 309 aa6.22□□□□□ -1.41
VMA6YLR447C RKM2Q03942 479 aa6.22□□□□□ -1.41
VMA6YLR447C QNS1P38795 714 aaKnown RBP6.21□□□□□ -1.42
VMA6YLR447C UBP3Q01477 912 aaKnown RBP RIP-Chip data6.21□□□□□ -1.42not detected
VMA6YLR447C ESC8Q08119 714 aa6.21□□□□□ -1.42
VMA6YLR447C SAM35P14693 329 aa6.2□□□□□ -1.42
VMA6YLR447C YCR015CP25616 317 aa6.2□□□□□ -1.42
VMA6YLR447C MET4P32389 672 aa6.2□□□□□ -1.42
VMA6YLR447C ADI1Q03677 179 aa6.2□□□□□ -1.42
VMA6YLR447C NBA1Q08229 501 aaKnown RBP6.2□□□□□ -1.42
VMA6YLR447C PRP6P19735 899 aaPredicted RBP6.19□□□□□ -1.42
VMA6YLR447C SRO9P25567 434 aaKnown RBP6.19□□□□□ -1.42
VMA6YLR447C SEC20P28791 383 aa6.19□□□□□ -1.42
VMA6YLR447C AIM26P32858 118 aa6.19□□□□□ -1.42
VMA6YLR447C ETP1P38748 585 aaKnown RBP6.19□□□□□ -1.42
VMA6YLR447C AIM3P38266 947 aaKnown RBP6.18□□□□□ -1.42
VMA6YLR447C YJL045WP47052 634 aa6.18□□□□□ -1.42
VMA6YLR447C YGL140CP53120 1219 aa6.17□□□□□ -1.42
VMA6YLR447C SNO2P53823 222 aa6.17□□□□□ -1.42
VMA6YLR447C EST2Q06163 884 aa6.17□□□□□ -1.42
VMA6YLR447C RPT1P33299 467 aaKnown RBP6.16□□□□□ -1.42
VMA6YLR447C THI80P35202 319 aa6.16□□□□□ -1.42
VMA6YLR447C RDH54P38086 958 aa6.16□□□□□ -1.42
VMA6YLR447C YOR352WQ08816 343 aa6.16□□□□□ -1.42
VMA6YLR447C YDL177CQ12257 170 aa6.16□□□□□ -1.42
VMA6YLR447C COQ4O13525 335 aa6.15□□□□□ -1.42
VMA6YLR447C YSC84P32793 468 aa6.15□□□□□ -1.42
VMA6YLR447C RIM8P53179 542 aa6.15□□□□□ -1.42
VMA6YLR447C ENV11P53246 860 aa6.15□□□□□ -1.42
VMA6YLR447C YPL109CQ02981 657 aa6.15□□□□□ -1.42
VMA6YLR447C SPS1P08458 490 aa6.14□□□□□ -1.43
VMA6YLR447C SLD2P34252 453 aa6.14□□□□□ -1.43
VMA6YLR447C CCZ1P38273 704 aa6.14□□□□□ -1.43
VMA6YLR447C GIP4P39732 760 aa6.14□□□□□ -1.43
VMA6YLR447C WHI5Q12416 295 aa6.14□□□□□ -1.43
VMA6YLR447C SOD2P00447 233 aa6.13□□□□□ -1.43
VMA6YLR447C SEC23P15303 768 aaKnown RBP6.13□□□□□ -1.43
VMA6YLR447C TOS4Q06266 489 aa6.13□□□□□ -1.43
VMA6YLR447C RSC58Q07979 502 aa6.13□□□□□ -1.43
VMA6YLR447C PTC5Q12511 572 aa6.13□□□□□ -1.43
VMA6YLR447C TAF13P11747 167 aa6.12□□□□□ -1.43
VMA6YLR447C FAA3P39002 694 aa6.12□□□□□ -1.43
VMA6YLR447C TAF1P46677 1066 aa6.12□□□□□ -1.43
VMA6YLR447C RSB1Q08417 382 aa6.12□□□□□ -1.43
VMA6YLR447C HXK1P04806 485 aaKnown RBP6.11□□□□□ -1.43
VMA6YLR447C DED1P06634 604 aaKnown RBP6.11□□□□□ -1.43
VMA6YLR447C PRE9P23638 258 aaKnown RBP6.11□□□□□ -1.43
VMA6YLR447C KIP1P28742 1111 aa6.11□□□□□ -1.43
VMA6YLR447C TOD6P34219 525 aa6.11□□□□□ -1.43
VMA6YLR447C MRPS18P42847 217 aa6.11□□□□□ -1.43
VMA6YLR447C HOS3Q02959 697 aaKnown RBP6.11□□□□□ -1.43
VMA6YLR447C MCD1Q12158 566 aa6.11□□□□□ -1.43
VMA6YLR447C RPS13P05756 151 aaKnown RBP6.1□□□□□ -1.43
VMA6YLR447C TNA1P53322 534 aa6.1□□□□□ -1.43
VMA6YLR447C HEM13P11353 328 aaKnown RBP6.09□□□□□ -1.43
VMA6YLR447C FLR1P38124 548 aa6.09□□□□□ -1.43
VMA6YLR447C IPL1P38991 367 aa6.09□□□□□ -1.43
VMA6YLR447C YPL277CQ08989 487 aa6.09□□□□□ -1.43
VMA6YLR447C PUF4P25339 888 aaKnown RBP RIP-Chip data6.08□□□□□ -1.44not detected
VMA6YLR447C ALG3P38179 458 aa6.08□□□□□ -1.44
VMA6YLR447C GPB2P39717 880 aa6.08□□□□□ -1.44
VMA6YLR447C PIC2P40035 300 aa6.08□□□□□ -1.44
VMA6YLR447C HNT2P49775 206 aa6.08□□□□□ -1.44
VMA6YLR447C YGR122WP53272 402 aa6.08□□□□□ -1.44
VMA6YLR447C YPL260WQ08977 551 aa6.08□□□□□ -1.44
VMA6YLR447C AFG2P32794 780 aa6.07□□□□□ -1.44
VMA6YLR447C SEC26P41810 973 aaKnown RBP6.07□□□□□ -1.44
VMA6YLR447C YLR358CO13565 187 aa6.06□□□□□ -1.44
VMA6YLR447C BAP2P38084 609 aa6.05□□□□□ -1.44
VMA6YLR447C MGE1P38523 228 aa6.05□□□□□ -1.44
VMA6YLR447C PIK1P39104 1066 aa6.05□□□□□ -1.44
VMA6YLR447C RPN3P40016 523 aaKnown RBP6.05□□□□□ -1.44
VMA6YLR447C SGD1Q06132 899 aa6.05□□□□□ -1.44
VMA6YLR447C HDA2Q06629 674 aa6.05□□□□□ -1.44
VMA6YLR447C RCL1Q08096 367 aaPredicted RBP6.05□□□□□ -1.44
VMA6YLR447C SPO21Q12411 609 aa6.05□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms