RNA–Protein interactions for RNA: YLR447C

VMA6, Transcript of Subunit d of the V0 integral membrane domain of V-ATPase, yeastyeast

Gene VMA6, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA6YLR447C MTC1P47018 478 aaKnown RBP16.65■□□□□ 0.26
VMA6YLR447C DRS1P32892 752 aaKnown RBP15.64■□□□□ 0.09
VMA6YLR447C FAP1P53971 965 aa15.04■□□□□ -0
VMA6YLR447C PRY3P47033 881 aa14.09□□□□□ -0.15
VMA6YLR447C PRI1P10363 409 aa14.02□□□□□ -0.17
VMA6YLR447C AAD16Q02895 342 aa13.96□□□□□ -0.17
VMA6YLR447C ISW2Q08773 1120 aa13.88□□□□□ -0.19
VMA6YLR447C DIP2Q12220 943 aaPredicted RBP13.7□□□□□ -0.22
VMA6YLR447C RPG1P38249 964 aaKnown RBP13.69□□□□□ -0.22
VMA6YLR447C RSE1Q04693 1361 aaKnown RBP13.25□□□□□ -0.29
VMA6YLR447C TSR3Q12094 313 aaKnown RBP13.25□□□□□ -0.29
VMA6YLR447C HAA1Q12753 694 aaKnown RBP13.25□□□□□ -0.29
VMA6YLR447C AVT3P36062 692 aa13.15□□□□□ -0.3
VMA6YLR447C YCK3P39962 524 aa13.11□□□□□ -0.31
VMA6YLR447C BFR2Q06631 534 aaKnown RBP13.04□□□□□ -0.32
VMA6YLR447C MRPL32P25348 183 aa12.82□□□□□ -0.36
VMA6YLR447C RPL17AP05740 184 aaKnown RBP12.8□□□□□ -0.36
VMA6YLR447C REB1P21538 810 aa12.8□□□□□ -0.36
VMA6YLR447C RPL17BP46990 184 aaKnown RBP12.8□□□□□ -0.36
VMA6YLR447C YGL015CP33199 130 aa12.28□□□□□ -0.44
VMA6YLR447C SPT21P35209 758 aa12.16□□□□□ -0.46
VMA6YLR447C CDC27P38042 758 aa12.05□□□□□ -0.48
VMA6YLR447C YKR023WP36119 530 aaKnown RBP12.04□□□□□ -0.48
VMA6YLR447C HOP09932 586 aa11.84□□□□□ -0.51
VMA6YLR447C TFC8Q12308 588 aa11.82□□□□□ -0.52
VMA6YLR447C RIM101P33400 625 aa11.79□□□□□ -0.52
VMA6YLR447C UBP10P53874 792 aaPredicted RBP11.78□□□□□ -0.52
VMA6YLR447C DCD1P06773 312 aa11.75□□□□□ -0.53
VMA6YLR447C MAP2P38174 421 aaKnown RBP11.72□□□□□ -0.53
VMA6YLR447C SCY1P53009 804 aa11.52□□□□□ -0.57
VMA6YLR447C TFA1P36100 482 aa11.45□□□□□ -0.58
VMA6YLR447C BCH2P36122 765 aa11.44□□□□□ -0.58
VMA6YLR447C SLX5P32828 619 aaKnown RBP11.39□□□□□ -0.59
VMA6YLR447C TIF4632P39936 914 aaKnown RBP11.39□□□□□ -0.59
VMA6YLR447C OXP1P28273 1286 aa11.37□□□□□ -0.59
VMA6YLR447C YIL055CP40523 627 aaKnown RBP11.36□□□□□ -0.59
VMA6YLR447C PTP3P40048 928 aa11.32□□□□□ -0.6
VMA6YLR447C TGL3P40308 642 aa11.27□□□□□ -0.61
VMA6YLR447C BUD31P25337 157 aaPredicted RBP11.17□□□□□ -0.62
VMA6YLR447C EPS1P40557 701 aa11.17□□□□□ -0.62
VMA6YLR447C BDF1P35817 686 aa11.12□□□□□ -0.63
VMA6YLR447C YAH1Q12184 172 aaKnown RBP11.12□□□□□ -0.63
VMA6YLR447C RSM7P47150 247 aa11.11□□□□□ -0.63
VMA6YLR447C BBC1P47068 1157 aa11.08□□□□□ -0.64
VMA6YLR447C AI2P03876 854 aa11□□□□□ -0.65
VMA6YLR447C UBP9P39967 754 aa10.99□□□□□ -0.65
VMA6YLR447C YLR271WQ06152 274 aa10.88□□□□□ -0.67
VMA6YLR447C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.82□□□□□ -0.68not detected
VMA6YLR447C SSP1P38871 571 aa10.8□□□□□ -0.68
VMA6YLR447C YOR238WQ08634 303 aa10.8□□□□□ -0.68
VMA6YLR447C MST1P07236 462 aa10.75□□□□□ -0.69
VMA6YLR447C NSR1P27476 414 aaKnown RBP RIP-Chip data10.75□□□□□ -0.69not detected
VMA6YLR447C YAP5P40574 245 aa10.73□□□□□ -0.69
VMA6YLR447C SIS1P25294 352 aaKnown RBP10.72□□□□□ -0.69
VMA6YLR447C PSD2P53037 1138 aaKnown RBP10.71□□□□□ -0.69
VMA6YLR447C MRM1P25270 412 aa10.61□□□□□ -0.71
VMA6YLR447C YBL029C-AQ3E756 94 aa10.59□□□□□ -0.71
VMA6YLR447C MGA2P40578 1113 aa10.57□□□□□ -0.72
VMA6YLR447C GTT3P39996 337 aa10.53□□□□□ -0.72
VMA6YLR447C VNX1P42839 908 aa10.49□□□□□ -0.73
VMA6YLR447C WSC3Q12215 556 aa10.49□□□□□ -0.73
VMA6YLR447C CST9Q06032 482 aa10.48□□□□□ -0.73
VMA6YLR447C SPP1Q03012 353 aa10.46□□□□□ -0.73
VMA6YLR447C PIB1Q06651 286 aa10.43□□□□□ -0.74
VMA6YLR447C RTG3P38165 486 aa10.42□□□□□ -0.74
VMA6YLR447C YMR1P47147 688 aaKnown RBP RIP-Chip data10.38□□□□□ -0.75not detected
VMA6YLR447C TIF11P38912 153 aaKnown RBP10.34□□□□□ -0.75
VMA6YLR447C DBP1P24784 617 aaKnown RBP10.31□□□□□ -0.76
VMA6YLR447C VPS29P38759 282 aa10.31□□□□□ -0.76
VMA6YLR447C YFR006WP43590 535 aa10.26□□□□□ -0.77
VMA6YLR447C ULI1P43604 169 aa10.24□□□□□ -0.77
VMA6YLR447C MSB4Q12317 492 aa10.24□□□□□ -0.77
VMA6YLR447C RCR1P38212 213 aa10.22□□□□□ -0.77
VMA6YLR447C EAP1P36041 632 aaKnown RBP10.21□□□□□ -0.77
VMA6YLR447C STS1P38637 319 aa10.21□□□□□ -0.77
VMA6YLR447C VMA1P17255 1071 aaKnown RBP10.18□□□□□ -0.78
VMA6YLR447C YOL036WQ08206 761 aa10.17□□□□□ -0.78
VMA6YLR447C LDB19Q12502 818 aa10.17□□□□□ -0.78
VMA6YLR447C SET4P42948 560 aa10.16□□□□□ -0.78
VMA6YLR447C YJL171CP46992 396 aa10.16□□□□□ -0.78
VMA6YLR447C IOC2Q12072 812 aa10.14□□□□□ -0.79
VMA6YLR447C FKH1P40466 484 aa10.12□□□□□ -0.79
VMA6YLR447C AIR2Q12476 344 aaKnown RBP10.11□□□□□ -0.79
VMA6YLR447C SAM3Q08986 587 aa10.1□□□□□ -0.79
VMA6YLR447C TRP5P00931 707 aaKnown RBP10.06□□□□□ -0.8
VMA6YLR447C ABP1P15891 592 aaKnown RBP10.02□□□□□ -0.81
VMA6YLR447C RTG1P32607 177 aa10.02□□□□□ -0.81
VMA6YLR447C GYP5Q12344 894 aa10.02□□□□□ -0.81
VMA6YLR447C YNL035CP53962 389 aaKnown RBP9.99□□□□□ -0.81
VMA6YLR447C BMT6Q12291 365 aa9.99□□□□□ -0.81
VMA6YLR447C NCR1Q12200 1170 aa9.98□□□□□ -0.81
VMA6YLR447C MAK11P20484 414 aaKnown RBP9.97□□□□□ -0.81
VMA6YLR447C SEC61P32915 480 aa9.95□□□□□ -0.82
VMA6YLR447C TFG1P41895 735 aaPredicted RBP9.95□□□□□ -0.82
VMA6YLR447C HTA1P04911 132 aaKnown RBP9.94□□□□□ -0.82
VMA6YLR447C HTA2P04912 132 aa9.94□□□□□ -0.82
VMA6YLR447C RAM2P29703 316 aa9.94□□□□□ -0.82
VMA6YLR447C MIF2P35201 549 aa9.94□□□□□ -0.82
VMA6YLR447C DCW1P36091 449 aa9.92□□□□□ -0.82
VMA6YLR447C JIP4Q03361 876 aa9.92□□□□□ -0.82
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms