RNA–Protein interactions for RNA: YLR025W

SNF7, Transcript of One of four subunits of the ESCRT-III complex, yeastyeast

Gene SNF7, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF7YLR025W MET1P36150 593 aa8.43□□□□□ -1.06
SNF7YLR025W RFC5P38251 354 aa8.43□□□□□ -1.06
SNF7YLR025W RAT1Q02792 1006 aaKnown RBP8.43□□□□□ -1.06
SNF7YLR025W UBP16Q02863 499 aa8.43□□□□□ -1.06
SNF7YLR025W SGD1Q06132 899 aa8.43□□□□□ -1.06
SNF7YLR025W DUR1,2P32528 1835 aaKnown RBP8.43□□□□□ -1.06
SNF7YLR025W PUP1P25043 261 aa8.42□□□□□ -1.06
SNF7YLR025W MKS1P34072 584 aa8.42□□□□□ -1.06
SNF7YLR025W CTR9P89105 1077 aa8.42□□□□□ -1.06
SNF7YLR025W CTI6Q08923 506 aa8.42□□□□□ -1.06
SNF7YLR025W MET32Q12041 191 aa8.42□□□□□ -1.06
SNF7YLR025W TAH18Q12181 623 aa8.42□□□□□ -1.06
SNF7YLR025W MATALPHA2P0CY08 210 aa8.41□□□□□ -1.06
SNF7YLR025W HMLALPHA2P0CY09 210 aa8.41□□□□□ -1.06
SNF7YLR025W SSA1P10591 642 aaKnown RBP8.41□□□□□ -1.06
SNF7YLR025W RDS1P25611 832 aa8.41□□□□□ -1.06
SNF7YLR025W FBP26P32604 452 aa8.41□□□□□ -1.06
SNF7YLR025W ELM1P32801 640 aa8.41□□□□□ -1.06
SNF7YLR025W SKI2P35207 1287 aaKnown RBP RIP-Chip data8.41□□□□□ -1.06not detected
SNF7YLR025W MRPL10P36520 322 aa8.41□□□□□ -1.06
SNF7YLR025W YBL086CP38177 466 aa8.41□□□□□ -1.06
SNF7YLR025W KTR7P40504 517 aa8.41□□□□□ -1.06
SNF7YLR025W AIR1P40507 360 aaKnown RBP8.41□□□□□ -1.06
SNF7YLR025W DIB1Q06819 143 aaPredicted RBP8.41□□□□□ -1.06
SNF7YLR025W TRS33Q99394 268 aa8.41□□□□□ -1.06
SNF7YLR025W POM152P39685 1337 aa8.4□□□□□ -1.06
SNF7YLR025W GAL2P13181 574 aa8.4□□□□□ -1.06
SNF7YLR025W NUG1P40010 520 aaKnown RBP8.4□□□□□ -1.06
SNF7YLR025W IRC8P47046 822 aa8.4□□□□□ -1.06
SNF7YLR025W ISU1Q03020 165 aa8.4□□□□□ -1.06
SNF7YLR025W SPN1Q06505 410 aaPredicted RBP8.4□□□□□ -1.06
SNF7YLR025W NOB1Q08444 459 aaKnown RBP8.4□□□□□ -1.06
SNF7YLR025W YPL150WQ12152 901 aa8.4□□□□□ -1.06
SNF7YLR025W ADR1P07248 1323 aa8.39□□□□□ -1.07
SNF7YLR025W SES1P07284 462 aaKnown RBP8.39□□□□□ -1.07
SNF7YLR025W FRS2P15625 503 aaKnown RBP8.39□□□□□ -1.07
SNF7YLR025W PFK2P16862 959 aaKnown RBP RIP-Chip data8.39□□□□□ -1.07not detected
SNF7YLR025W MAL33P38157 468 aa8.39□□□□□ -1.07
SNF7YLR025W NPR3P38742 1146 aa8.39□□□□□ -1.07
SNF7YLR025W HAL5P38970 855 aaKnown RBP8.39□□□□□ -1.07
SNF7YLR025W TCB2P48231 1178 aa8.39□□□□□ -1.07
SNF7YLR025W EST2Q06163 884 aa8.39□□□□□ -1.07
SNF7YLR025W THI3Q07471 609 aa8.39□□□□□ -1.07
SNF7YLR025W NOP58Q12499 511 aaKnown RBP8.39□□□□□ -1.07
SNF7YLR025W DDP1Q99321 188 aaKnown RBP8.39□□□□□ -1.07
SNF7YLR025W HSP82P02829 709 aaKnown RBP8.38□□□□□ -1.07
SNF7YLR025W CYC8P14922 966 aa8.38□□□□□ -1.07
SNF7YLR025W AFT1P22149 690 aa8.38□□□□□ -1.07
SNF7YLR025W PHO87P25360 923 aa8.38□□□□□ -1.07
SNF7YLR025W MCM2P29469 868 aa8.38□□□□□ -1.07
SNF7YLR025W RRM3P38766 723 aa8.38□□□□□ -1.07
SNF7YLR025W CRG1P38892 291 aaRIP-Chip data8.38□□□□□ -1.07not detected
SNF7YLR025W HST3P53687 447 aa8.38□□□□□ -1.07
SNF7YLR025W VMS1Q04311 632 aaKnown RBP8.38□□□□□ -1.07
SNF7YLR025W DPH6Q12429 685 aa8.38□□□□□ -1.07
SNF7YLR025W TSC13Q99190 310 aa8.38□□□□□ -1.07
SNF7YLR025W RPP2BP02400 110 aaKnown RBP8.37□□□□□ -1.07
SNF7YLR025W HCA4P20448 770 aaKnown RBP8.37□□□□□ -1.07
SNF7YLR025W MGM1P32266 881 aa8.37□□□□□ -1.07
SNF7YLR025W ASH1P34233 588 aa8.37□□□□□ -1.07
SNF7YLR025W TPM2P40414 161 aa8.37□□□□□ -1.07
SNF7YLR025W YFL034WP43564 1073 aa8.37□□□□□ -1.07
SNF7YLR025W EPL1P43572 832 aa8.37□□□□□ -1.07
SNF7YLR025W KRE33P53914 1056 aaKnown RBP8.37□□□□□ -1.07
SNF7YLR025W ECM23Q02710 187 aa8.37□□□□□ -1.07
SNF7YLR025W HDA3Q06623 655 aa8.37□□□□□ -1.07
SNF7YLR025W IRC3Q06683 689 aa8.37□□□□□ -1.07
SNF7YLR025W CBC2Q08920 208 aaKnown RBP RIP-Chip data8.37□□□□□ -1.07not detected
SNF7YLR025W PGI1P12709 554 aaKnown RBP8.36□□□□□ -1.07
SNF7YLR025W STE6P12866 1290 aa8.36□□□□□ -1.07
SNF7YLR025W HAP4P14064 554 aa8.36□□□□□ -1.07
SNF7YLR025W RGP1P16664 663 aa8.36□□□□□ -1.07
SNF7YLR025W MFT1P33441 392 aaKnown RBP8.36□□□□□ -1.07
SNF7YLR025W YKT6P36015 200 aaKnown RBP8.36□□□□□ -1.07
SNF7YLR025W GEF1P37020 779 aa8.36□□□□□ -1.07
SNF7YLR025W NOC2P39744 710 aaKnown RBP8.36□□□□□ -1.07
SNF7YLR025W IOC3P43596 787 aa8.36□□□□□ -1.07
SNF7YLR025W UTP22P53254 1237 aaPredicted RBP8.36□□□□□ -1.07
SNF7YLR025W INM2Q05533 292 aa8.36□□□□□ -1.07
SNF7YLR025W BDS1Q08347 646 aa8.36□□□□□ -1.07
SNF7YLR025W HXK1P04806 485 aaKnown RBP8.35□□□□□ -1.07
SNF7YLR025W SPT2P06843 333 aaPredicted RBP8.35□□□□□ -1.07
SNF7YLR025W MIP1P15801 1254 aa8.35□□□□□ -1.07
SNF7YLR025W RER2P35196 286 aa8.35□□□□□ -1.07
SNF7YLR025W YER130CP39959 443 aa8.35□□□□□ -1.07
SNF7YLR025W TFG2P41896 400 aaPredicted RBP8.35□□□□□ -1.07
SNF7YLR025W DFG5Q05031 458 aa8.35□□□□□ -1.07
SNF7YLR025W MRD1Q06106 887 aaKnown RBP8.35□□□□□ -1.07
SNF7YLR025W BDF2Q07442 638 aa8.35□□□□□ -1.07
SNF7YLR025W NBL1Q3E7Y6 73 aa8.35□□□□□ -1.07
SNF7YLR025W LAM4P38800 1345 aa8.34□□□□□ -1.07
SNF7YLR025W CYB2P00175 591 aa8.34□□□□□ -1.07
SNF7YLR025W GPA1P08539 472 aa8.34□□□□□ -1.07
SNF7YLR025W YIR042CP40586 236 aa8.34□□□□□ -1.07
SNF7YLR025W ALD3P54114 506 aa8.34□□□□□ -1.07
SNF7YLR025W UFD2P54860 961 aa8.34□□□□□ -1.07
SNF7YLR025W TIM50Q02776 476 aa8.34□□□□□ -1.07
SNF7YLR025W SYF1Q04048 859 aaPredicted RBP8.34□□□□□ -1.07
SNF7YLR025W ATE1P16639 503 aa8.33□□□□□ -1.08
SNF7YLR025W FRD1P32614 470 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms