Protein–RNA interactions for Protein: P34072

MKS1, Negative regulator of RAS-cAMP pathway, yeastyeast

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MKS1P34072 NSR1YGR159C 1245 nt17.76■□□□□ 0.43
MKS1P34072 YML009W-BYML009W-B 477 nt17.64■□□□□ 0.41
MKS1P34072 NOP1YDL014W 984 nt16.99■□□□□ 0.31
MKS1P34072 MDJ1YFL016C 1536 nt16.09■□□□□ 0.17
MKS1P34072 YKL036CYKL036C 393 nt15.43■□□□□ 0.06
MKS1P34072 SRX1YKL086W 384 nt14.86□□□□□ -0.03
MKS1P34072 Q0297Q0297 156 nt14.8□□□□□ -0.04
MKS1P34072 YJL027CYJL027C 417 nt14.78□□□□□ -0.04
MKS1P34072 Q0182Q0182 405 nt14.14□□□□□ -0.15
MKS1P34072 DBP2YNL112W 1641 nt14.12□□□□□ -0.15
MKS1P34072 YCR051WYCR051W 669 nt14.09□□□□□ -0.15
MKS1P34072 MOT3YMR070W 1473 nt14.04□□□□□ -0.16
MKS1P34072 SCS3YGL126W 1143 nt13.92□□□□□ -0.18
MKS1P34072 SSA3YBL075C 1950 nt13.92□□□□□ -0.18
MKS1P34072 YBR190WYBR190W 312 nt13.74□□□□□ -0.21
MKS1P34072 TRN1tP(UGG)A 72 nt13.63□□□□□ -0.23
MKS1P34072 SUF9tP(UGG)F 72 nt13.63□□□□□ -0.23
MKS1P34072 SUF8tP(UGG)H 72 nt13.63□□□□□ -0.23
MKS1P34072 tP(UGG)LtP(UGG)L 72 nt13.63□□□□□ -0.23
MKS1P34072 SUF7tP(UGG)M 72 nt13.63□□□□□ -0.23
MKS1P34072 tP(UGG)N1tP(UGG)N1 72 nt13.63□□□□□ -0.23
MKS1P34072 tP(UGG)N2tP(UGG)N2 72 nt13.63□□□□□ -0.23
MKS1P34072 tP(UGG)O1tP(UGG)O1 72 nt13.63□□□□□ -0.23
MKS1P34072 SUF11tP(UGG)O2 72 nt13.63□□□□□ -0.23
MKS1P34072 YGR139WYGR139W 339 nt13.58□□□□□ -0.24
MKS1P34072 CCC1YLR220W 969 nt13.51□□□□□ -0.25
MKS1P34072 RTC3YHR087W 336 nt13.44□□□□□ -0.26
MKS1P34072 YOL085CYOL085C 342 nt13.4□□□□□ -0.26
MKS1P34072 RPP1BYDL130W 321 nt13.28□□□□□ -0.28
MKS1P34072 PKP1YIL042C 1185 nt13.26□□□□□ -0.29
MKS1P34072 RVS167YDR388W 1449 nt13.14□□□□□ -0.31
MKS1P34072 SCJ1YMR214W 1134 nt13.09□□□□□ -0.31
MKS1P34072 NME1NME1 340 nt13.05□□□□□ -0.32
MKS1P34072 tP(UGG)O3tP(UGG)O3 72 nt12.79□□□□□ -0.36
MKS1P34072 PET122YER153C 765 nt12.76□□□□□ -0.37
MKS1P34072 PUT4YOR348C 1884 nt12.76□□□□□ -0.37
MKS1P34072 SHR5YOL110W 714 nt12.64□□□□□ -0.39
MKS1P34072 URN1YPR152C 1398 nt12.49□□□□□ -0.41
MKS1P34072 SCR1SCR1 522 nt12.49□□□□□ -0.41
MKS1P34072 ARE1YCR048W 1833 nt12.42□□□□□ -0.42
MKS1P34072 DEP1YAL013W 1218 nt12.42□□□□□ -0.42
MKS1P34072 SAH1YER043C 1350 nt12.38□□□□□ -0.43
MKS1P34072 ATS1YAL020C 1002 nt12.36□□□□□ -0.43
MKS1P34072 YDJ1YNL064C 1230 nt12.36□□□□□ -0.43
MKS1P34072 CSM2YIL132C 642 nt12.35□□□□□ -0.43
MKS1P34072 RRN5YLR141W 1092 nt12.35□□□□□ -0.43
MKS1P34072 OPI9YLR338W 858 nt12.35□□□□□ -0.43
MKS1P34072 POA1YBR022W 534 nt12.32□□□□□ -0.44
MKS1P34072 YHR049C-AYHR049C-A 297 nt12.26□□□□□ -0.45
MKS1P34072 RPN10YHR200W 807 nt12.18□□□□□ -0.46
MKS1P34072 GAR1YHR089C 618 nt12.16□□□□□ -0.46
MKS1P34072 SPT5YML010W 3192 nt12.16□□□□□ -0.46
MKS1P34072 YNL208WYNL208W 600 nt12.15□□□□□ -0.46
MKS1P34072 BSC6YOL137W 1494 nt12.1□□□□□ -0.47
MKS1P34072 YER088W-BYER088W-B 147 nt12.1□□□□□ -0.47
MKS1P34072 PAU21YOR394W 495 nt12.08□□□□□ -0.48
MKS1P34072 PAU22YPL282C 495 nt12.08□□□□□ -0.48
MKS1P34072 SSA4YER103W 1929 nt12.06□□□□□ -0.48
MKS1P34072 RSB1YOR049C 1065 nt12□□□□□ -0.49
MKS1P34072 PUN1YLR414C 792 nt11.97□□□□□ -0.49
MKS1P34072 ARO7YPR060C 771 nt11.96□□□□□ -0.49
MKS1P34072 BUD23YCR047C 828 nt11.95□□□□□ -0.5
MKS1P34072 PTC2YER089C 1395 nt11.91□□□□□ -0.5
MKS1P34072 YJR018WYJR018W 363 nt11.88□□□□□ -0.51
MKS1P34072 NAB2YGL122C 1578 nt11.77□□□□□ -0.53
MKS1P34072 TIR1YER011W 765 nt11.76□□□□□ -0.53
MKS1P34072 BDF1YLR399C 2061 nt11.75□□□□□ -0.53
MKS1P34072 SSA1YAL005C 1929 nt11.7□□□□□ -0.54
MKS1P34072 YJR120WYJR120W 351 nt11.69□□□□□ -0.54
MKS1P34072 PAM17YKR065C 594 nt11.64□□□□□ -0.55
MKS1P34072 PAC11YDR488C 1602 nt11.64□□□□□ -0.55
MKS1P34072 REG2YBR050C 1017 nt11.62□□□□□ -0.55
MKS1P34072 FIS1YIL065C 468 nt11.61□□□□□ -0.55
MKS1P34072 DAL1YIR027C 1383 nt11.56□□□□□ -0.56
MKS1P34072 TAT1YBR069C 1860 nt11.56□□□□□ -0.56
MKS1P34072 FPR4YLR449W 1179 nt11.55□□□□□ -0.56
MKS1P34072 RPP2BYDR382W 333 nt11.53□□□□□ -0.56
MKS1P34072 PST2YDR032C 597 nt11.5□□□□□ -0.57
MKS1P34072 SRB2YHR041C 633 nt11.5□□□□□ -0.57
MKS1P34072 NVJ2YPR091C 2313 nt11.48□□□□□ -0.57
MKS1P34072 INM2YDR287W 879 nt11.47□□□□□ -0.57
MKS1P34072 PHO4YFR034C 939 nt11.47□□□□□ -0.57
MKS1P34072 MEP2YNL142W 1500 nt11.43□□□□□ -0.58
MKS1P34072 YPS1YLR120C 1710 nt11.35□□□□□ -0.59
MKS1P34072 YBL100CYBL100C 315 nt11.34□□□□□ -0.59
MKS1P34072 BUR6YER159C 429 nt11.28□□□□□ -0.6
MKS1P34072 BDH2YAL061W 1254 nt11.28□□□□□ -0.6
MKS1P34072 MET8YBR213W 825 nt11.28□□□□□ -0.6
MKS1P34072 DCW1YKL046C 1350 nt11.28□□□□□ -0.6
MKS1P34072 FPS1YLL043W 2010 nt11.24□□□□□ -0.61
MKS1P34072 YDR095CYDR095C 411 nt11.23□□□□□ -0.61
MKS1P34072 YHR165W-AYHR165W-A 312 nt11.23□□□□□ -0.61
MKS1P34072 WWM1YFL010C 636 nt11.21□□□□□ -0.61
MKS1P34072 Q0010Q0010 387 nt11.21□□□□□ -0.61
MKS1P34072 FUN26YAL022C 1554 nt11.2□□□□□ -0.62
MKS1P34072 YEL009C-AYEL009C-A 408 nt11.17□□□□□ -0.62
MKS1P34072 ARA2YMR041C 1008 nt11.17□□□□□ -0.62
MKS1P34072 CLB6YGR109C 1143 nt11.16□□□□□ -0.62
MKS1P34072 BMT5YIL096C 1011 nt11.16□□□□□ -0.62
MKS1P34072 SHU1YHL006C 453 nt11.12□□□□□ -0.63
Retrieved 100 of 7,029 protein–RNA pairs in 15.5 ms