RNA–Protein interactions for RNA: YIR042C

YIR042C, Transcript of Putative protein of unknown function, yeast

Gene YIR042C, Length 711 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YIR042C	YIR042C	SPB4	P25808	606 aa	Predicted RBP	6.92	□□□□□ -1.3
YIR042C	YIR042C	RRP8	P38961	392 aa	Known RBP	6.92	□□□□□ -1.3
YIR042C	YIR042C	VID27	P40157	782 aa		6.92	□□□□□ -1.3
YIR042C	YIR042C	YGR153W	P48238	217 aa		6.92	□□□□□ -1.3
YIR042C	YIR042C	HFM1	P51979	1187 aa		6.92	□□□□□ -1.3
YIR042C	YIR042C	CAF130	P53280	1122 aa	Predicted RBP	6.92	□□□□□ -1.3
YIR042C	YIR042C	ALF1	P53904	254 aa		6.92	□□□□□ -1.3
YIR042C	YIR042C	EIS1	Q05050	843 aa	Known RBP	6.92	□□□□□ -1.3
YIR042C	YIR042C	CSC1	Q06538	782 aa		6.92	□□□□□ -1.3
YIR042C	YIR042C	RET1	P22276	1149 aa	Known RBP	6.91	□□□□□ -1.3
YIR042C	YIR042C	SEC65	P29478	273 aa		6.91	□□□□□ -1.3
YIR042C	YIR042C	SPC110	P32380	944 aa		6.91	□□□□□ -1.3
YIR042C	YIR042C	PFF1	P38244	976 aa		6.91	□□□□□ -1.3
YIR042C	YIR042C	TCD1	P38756	429 aa		6.91	□□□□□ -1.3
YIR042C	YIR042C	GAS5	Q08193	484 aa		6.91	□□□□□ -1.3
YIR042C	YIR042C	YOL075C	Q08234	1294 aa		6.91	□□□□□ -1.3
YIR042C	YIR042C	DSE3	Q08729	430 aa		6.91	□□□□□ -1.3
YIR042C	YIR042C	FLO11	P08640	1367 aa		6.91	□□□□□ -1.3
YIR042C	YIR042C	HIS4	P00815	799 aa	Known RBP	6.9	□□□□□ -1.3
YIR042C	YIR042C	MSH1	P25846	959 aa		6.9	□□□□□ -1.3
YIR042C	YIR042C	SMY1	P32364	656 aa	Known RBP	6.9	□□□□□ -1.3
YIR042C	YIR042C	EAP1	P36041	632 aa	Known RBP	6.9	□□□□□ -1.3
YIR042C	YIR042C	STT3	P39007	718 aa	Known RBP	6.9	□□□□□ -1.3
YIR042C	YIR042C	SEC9	P40357	651 aa		6.9	□□□□□ -1.3
YIR042C	YIR042C	RET3	P53600	189 aa		6.9	□□□□□ -1.3
YIR042C	YIR042C	NAF1	P53919	492 aa	Known RBP	6.9	□□□□□ -1.3
YIR042C	YIR042C	RPT6	Q01939	405 aa	Known RBP	6.9	□□□□□ -1.3
YIR042C	YIR042C	ERO1	Q03103	563 aa		6.9	□□□□□ -1.3
YIR042C	YIR042C	EBS1	Q03466	884 aa	Known RBP	6.9	□□□□□ -1.3
YIR042C	YIR042C	GIS4	Q04233	774 aa		6.9	□□□□□ -1.3
YIR042C	YIR042C	GFD1	Q04839	188 aa	Known RBP	6.9	□□□□□ -1.3
YIR042C	YIR042C	YCG1	Q06680	1035 aa		6.9	□□□□□ -1.3
YIR042C	YIR042C	YOR296W	Q08748	1289 aa		6.9	□□□□□ -1.3
YIR042C	YIR042C	HMI1	Q12039	706 aa		6.9	□□□□□ -1.3
YIR042C	YIR042C	CEX1	Q12453	761 aa		6.9	□□□□□ -1.3
YIR042C	YIR042C	ARG82	P07250	355 aa		6.89	□□□□□ -1.31
YIR042C	YIR042C	SSA2	P10592	639 aa	Known RBP	6.89	□□□□□ -1.31
YIR042C	YIR042C	SEC23	P15303	768 aa	Known RBP	6.89	□□□□□ -1.31
YIR042C	YIR042C	MRC1	P25588	1096 aa		6.89	□□□□□ -1.31
YIR042C	YIR042C	SIS2	P36024	562 aa		6.89	□□□□□ -1.31
YIR042C	YIR042C	MIP6	P38760	659 aa	Known RBP	6.89	□□□□□ -1.31
YIR042C	YIR042C	CTM1	P38818	585 aa		6.89	□□□□□ -1.31
YIR042C	YIR042C	EFM4	P40516	257 aa		6.89	□□□□□ -1.31
YIR042C	YIR042C	OSW7	P43611	510 aa		6.89	□□□□□ -1.31
YIR042C	YIR042C	YDR341C	Q05506	607 aa	Known RBP	6.89	□□□□□ -1.31
YIR042C	YIR042C	YPL260W	Q08977	551 aa		6.89	□□□□□ -1.31
YIR042C	YIR042C	ATG9	Q12142	997 aa		6.89	□□□□□ -1.31
YIR042C	YIR042C	FOB1	O13329	566 aa		6.88	□□□□□ -1.31
YIR042C	YIR042C	PET123	P17558	318 aa		6.88	□□□□□ -1.31
YIR042C	YIR042C	SAC6	P32599	642 aa	Known RBP	6.88	□□□□□ -1.31
YIR042C	YIR042C	MDL2	P33311	773 aa		6.88	□□□□□ -1.31
YIR042C	YIR042C	STO1	P34160	861 aa	Known RBP	6.88	□□□□□ -1.31
YIR042C	YIR042C	ATG32	P40458	529 aa		6.88	□□□□□ -1.31
YIR042C	YIR042C	PRP31	P49704	494 aa	Predicted RBP	6.88	□□□□□ -1.31
YIR042C	YIR042C	PIP2	P52960	996 aa		6.88	□□□□□ -1.31
YIR042C	YIR042C	PRP42	Q03776	544 aa	Known RBP	6.88	□□□□□ -1.31
YIR042C	YIR042C	VPS38	Q05919	439 aa		6.88	□□□□□ -1.31
YIR042C	YIR042C	MRD1	Q06106	887 aa	Known RBP	6.88	□□□□□ -1.31
YIR042C	YIR042C	SKG3	Q06315	1026 aa		6.88	□□□□□ -1.31
YIR042C	YIR042C	PSR2	Q07949	397 aa		6.88	□□□□□ -1.31
YIR042C	YIR042C	PSF3	Q12146	194 aa		6.88	□□□□□ -1.31
YIR042C	YIR042C	YKL068W-A	Q3E826	78 aa		6.88	□□□□□ -1.31
YIR042C	YIR042C	SPO12	P17123	173 aa		6.87	□□□□□ -1.31
YIR042C	YIR042C	ISY1	P21374	235 aa	Predicted RBP	6.87	□□□□□ -1.31
YIR042C	YIR042C	MSH3	P25336	1018 aa		6.87	□□□□□ -1.31
YIR042C	YIR042C	RRP43	P25359	394 aa	Predicted RBP	6.87	□□□□□ -1.31
YIR042C	YIR042C	CHS3	P29465	1165 aa		6.87	□□□□□ -1.31
YIR042C	YIR042C	PSO2	P30620	661 aa		6.87	□□□□□ -1.31
YIR042C	YIR042C	ERT1	P38140	529 aa		6.87	□□□□□ -1.31
YIR042C	YIR042C	EFM2	P38347	419 aa		6.87	□□□□□ -1.31
YIR042C	YIR042C	TOM71	P38825	639 aa	Known RBP	6.87	□□□□□ -1.31
YIR042C	YIR042C	UBP5	P39944	805 aa		6.87	□□□□□ -1.31
YIR042C	YIR042C	ALG2	P43636	503 aa		6.87	□□□□□ -1.31
YIR042C	YIR042C	JJJ2	P46997	583 aa		6.87	□□□□□ -1.31
YIR042C	YIR042C	ASE1	P50275	885 aa		6.87	□□□□□ -1.31
YIR042C	YIR042C	ERG5	P54781	538 aa		6.87	□□□□□ -1.31
YIR042C	YIR042C	MDM1	Q01846	1127 aa		6.87	□□□□□ -1.31
YIR042C	YIR042C	VPS60	Q03390	229 aa		6.87	□□□□□ -1.31
YIR042C	YIR042C	SAS4	Q04003	481 aa		6.87	□□□□□ -1.31
YIR042C	YIR042C	SML1	Q04964	104 aa		6.87	□□□□□ -1.31
YIR042C	YIR042C	HCR1	Q05775	265 aa	Known RBP	6.87	□□□□□ -1.31
YIR042C	YIR042C	NEW1	Q08972	1196 aa	Known RBP	6.87	□□□□□ -1.31
YIR042C	YIR042C	TIP41	Q12199	356 aa		6.87	□□□□□ -1.31
YIR042C	YIR042C	NOP14	Q99207	810 aa	Known RBP	6.87	□□□□□ -1.31
YIR042C	YIR042C	PPR1	P07272	904 aa	Predicted RBP	6.86	□□□□□ -1.31
YIR042C	YIR042C	TUP1	P16649	713 aa		6.86	□□□□□ -1.31
YIR042C	YIR042C	MAK11	P20484	414 aa	Known RBP	6.86	□□□□□ -1.31
YIR042C	YIR042C	CCT3	P39077	534 aa	Known RBP	6.86	□□□□□ -1.31
YIR042C	YIR042C	BUD16	P39988	312 aa		6.86	□□□□□ -1.31
YIR042C	YIR042C	VFA1	P40080	203 aa		6.86	□□□□□ -1.31
YIR042C	YIR042C	ATG3	P40344	310 aa		6.86	□□□□□ -1.31
YIR042C	YIR042C	SHQ1	P40486	507 aa	Predicted RBP	6.86	□□□□□ -1.31
YIR042C	YIR042C	CIT3	P43635	486 aa		6.86	□□□□□ -1.31
YIR042C	YIR042C	APL6	P46682	809 aa		6.86	□□□□□ -1.31
YIR042C	YIR042C	APT1	P49435	187 aa	Known RBP	6.86	□□□□□ -1.31
YIR042C	YIR042C	UBA2	P52488	636 aa		6.86	□□□□□ -1.31
YIR042C	YIR042C	TRS120	Q04183	1289 aa		6.86	□□□□□ -1.31
YIR042C	YIR042C	UBX2	Q04228	584 aa		6.86	□□□□□ -1.31
YIR042C	YIR042C	SPP382	Q06411	708 aa	Predicted RBP	6.86	□□□□□ -1.31
YIR042C	YIR042C	KEL3	Q08979	651 aa	Predicted RBP	6.86	□□□□□ -1.31

Retrieved 100 of 5,963 RNA–protein pairs in 34.7 ms