RNA–Protein interactions for RNA: YDL228C

YDL228C, Transcript of Dubious open reading frame, yeast

Gene YDL228C, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDL228C	YDL228C	MOT2	P34909	587 aa	Known RBP	4.93	□□□□□ -1.62
YDL228C	YDL228C	BSD2	P38356	321 aa		4.93	□□□□□ -1.62
YDL228C	YDL228C	NMD2	P38798	1089 aa	Known RBP	4.93	□□□□□ -1.62
YDL228C	YDL228C	PPM2	Q08282	695 aa		4.93	□□□□□ -1.62
YDL228C	YDL228C	TIF6	Q12522	245 aa	Known RBP	4.93	□□□□□ -1.62
YDL228C	YDL228C	ADP1	P25371	1049 aa		4.92	□□□□□ -1.62
YDL228C	YDL228C	MRT4	P33201	236 aa	Known RBP	4.92	□□□□□ -1.62
YDL228C	YDL228C	ASH1	P34233	588 aa		4.92	□□□□□ -1.62
YDL228C	YDL228C	BOI1	P38041	980 aa	Known RBP	4.92	□□□□□ -1.62
YDL228C	YDL228C	ECM21	P38167	1117 aa	Known RBP	4.92	□□□□□ -1.62
YDL228C	YDL228C	EMW1	P42842	904 aa	Known RBP	4.92	□□□□□ -1.62
YDL228C	YDL228C	NCB2	Q92317	146 aa		4.92	□□□□□ -1.62
YDL228C	YDL228C	TUB2	P02557	457 aa	Known RBP	4.91	□□□□□ -1.62
YDL228C	YDL228C	PMA1	P05030	918 aa	Known RBP	4.91	□□□□□ -1.62
YDL228C	YDL228C	GAL2	P13181	574 aa		4.91	□□□□□ -1.62
YDL228C	YDL228C	APE3	P37302	537 aa	Known RBP	4.91	□□□□□ -1.62
YDL228C	YDL228C	YMR147W	P40218	223 aa	Known RBP	4.91	□□□□□ -1.62
YDL228C	YDL228C	MLC1	P53141	149 aa		4.91	□□□□□ -1.62
YDL228C	YDL228C	RMD1	Q03441	430 aa		4.91	□□□□□ -1.62
YDL228C	YDL228C	STE20	Q03497	939 aa	Known RBP	4.91	□□□□□ -1.62
YDL228C	YDL228C	KAR5	Q04746	504 aa		4.91	□□□□□ -1.62
YDL228C	YDL228C	SRF1	Q12516	437 aa		4.91	□□□□□ -1.62
YDL228C	YDL228C	CYB2	P00175	591 aa		4.9	□□□□□ -1.63
YDL228C	YDL228C	YBL028C	P38202	106 aa		4.9	□□□□□ -1.63
YDL228C	YDL228C	TPS3	P38426	1054 aa	Known RBP	4.9	□□□□□ -1.63
YDL228C	YDL228C	RPL34B	P40525	121 aa	Known RBP	4.9	□□□□□ -1.63
YDL228C	YDL228C	PIP2	P52960	996 aa		4.9	□□□□□ -1.63
YDL228C	YDL228C	MRPS35	P53292	345 aa		4.9	□□□□□ -1.63
YDL228C	YDL228C	RBA50	Q04418	439 aa		4.9	□□□□□ -1.63
YDL228C	YDL228C	PCL8	Q08966	492 aa		4.9	□□□□□ -1.63
YDL228C	YDL228C	GIN4	Q12263	1142 aa		4.9	□□□□□ -1.63
YDL228C	YDL228C	PDR18	P53756	1333 aa		4.9	□□□□□ -1.63
YDL228C	YDL228C	SOH1	P38633	127 aa		4.89	□□□□□ -1.63
YDL228C	YDL228C	YHL050C	P38721	697 aa		4.89	□□□□□ -1.63
YDL228C	YDL228C	NOP2	P40991	618 aa	Known RBP	4.89	□□□□□ -1.63
YDL228C	YDL228C	DFG5	Q05031	458 aa		4.89	□□□□□ -1.63
YDL228C	YDL228C	YDL124W	Q07551	312 aa	Known RBP	4.89	□□□□□ -1.63
YDL228C	YDL228C	KEL3	Q08979	651 aa	Predicted RBP	4.89	□□□□□ -1.63
YDL228C	YDL228C	LAM4	P38800	1345 aa		4.89	□□□□□ -1.63
YDL228C	YDL228C	CHO2	P05374	869 aa	Known RBP	4.88	□□□□□ -1.63
YDL228C	YDL228C	FBP1	P09201	348 aa		4.88	□□□□□ -1.63
YDL228C	YDL228C	CDC16	P09798	840 aa		4.88	□□□□□ -1.63
YDL228C	YDL228C	KRS1	P15180	591 aa	Known RBP	4.88	□□□□□ -1.63
YDL228C	YDL228C	COQ1	P18900	473 aa		4.88	□□□□□ -1.63
YDL228C	YDL228C	AFT1	P22149	690 aa		4.88	□□□□□ -1.63
YDL228C	YDL228C	TTI1	P36097	1038 aa		4.88	□□□□□ -1.63
YDL228C	YDL228C	PBY1	P38254	753 aa		4.88	□□□□□ -1.63
YDL228C	YDL228C	ACA1	P39970	489 aa		4.88	□□□□□ -1.63
YDL228C	YDL228C	KTR7	P40504	517 aa		4.88	□□□□□ -1.63
YDL228C	YDL228C	NCS6	P53088	359 aa		4.88	□□□□□ -1.63
YDL228C	YDL228C	ISR1	Q06098	443 aa	Known RBP	4.88	□□□□□ -1.63
YDL228C	YDL228C	PEP12	P32854	288 aa		4.87	□□□□□ -1.63
YDL228C	YDL228C	MKS1	P34072	584 aa		4.87	□□□□□ -1.63
YDL228C	YDL228C	RFC1	P38630	861 aa	Known RBP	4.87	□□□□□ -1.63
YDL228C	YDL228C	MSH4	P40965	878 aa	Predicted RBP	4.87	□□□□□ -1.63
YDL228C	YDL228C	IOC3	P43596	787 aa		4.87	□□□□□ -1.63
YDL228C	YDL228C	IRC8	P47046	822 aa		4.87	□□□□□ -1.63
YDL228C	YDL228C	YJR115W	P47152	169 aa		4.87	□□□□□ -1.63
YDL228C	YDL228C	NKP2	Q06162	153 aa		4.87	□□□□□ -1.63
YDL228C	YDL228C	OCT1	P35999	772 aa		4.86	□□□□□ -1.63
YDL228C	YDL228C	TIF4631	P39935	952 aa	Known RBP	4.86	□□□□□ -1.63
YDL228C	YDL228C	BRE2	P43132	505 aa		4.86	□□□□□ -1.63
YDL228C	YDL228C	BRE1	Q07457	700 aa	Known RBP	4.86	□□□□□ -1.63
YDL228C	YDL228C	YPL260W	Q08977	551 aa		4.86	□□□□□ -1.63
YDL228C	YDL228C	LAP2	Q10740	671 aa		4.86	□□□□□ -1.63
YDL228C	YDL228C	TAH18	Q12181	623 aa		4.86	□□□□□ -1.63
YDL228C	YDL228C	PRE8	P23639	250 aa		4.85	□□□□□ -1.63
YDL228C	YDL228C	GEF1	P37020	779 aa		4.85	□□□□□ -1.63
YDL228C	YDL228C	PAM1	P37304	830 aa	Known RBP	4.85	□□□□□ -1.63
YDL228C	YDL228C	CST26	P38226	397 aa		4.85	□□□□□ -1.63
YDL228C	YDL228C	ERG7	P38604	731 aa		4.85	□□□□□ -1.63
YDL228C	YDL228C	RTS1	P38903	757 aa		4.85	□□□□□ -1.63
YDL228C	YDL228C	SPR3	P41901	512 aa		4.85	□□□□□ -1.63
YDL228C	YDL228C	NET1	P47035	1189 aa		4.85	□□□□□ -1.63
YDL228C	YDL228C	HST3	P53687	447 aa		4.85	□□□□□ -1.63
YDL228C	YDL228C	YLR225C	Q05948	407 aa	Known RBP	4.85	□□□□□ -1.63
YDL228C	YDL228C	SGD1	Q06132	899 aa		4.85	□□□□□ -1.63
YDL228C	YDL228C	SKG3	Q06315	1026 aa		4.85	□□□□□ -1.63
YDL228C	YDL228C	SRM1	P21827	482 aa		4.84	□□□□□ -1.63
YDL228C	YDL228C	CHS3	P29465	1165 aa		4.84	□□□□□ -1.63
YDL228C	YDL228C	PRO3	P32263	286 aa	Known RBP	4.84	□□□□□ -1.63
YDL228C	YDL228C	FBP26	P32604	452 aa		4.84	□□□□□ -1.63
YDL228C	YDL228C	OSH3	P38713	996 aa	Known RBP	4.84	□□□□□ -1.63
YDL228C	YDL228C	VID27	P40157	782 aa		4.84	□□□□□ -1.63
YDL228C	YDL228C	SNU71	P53207	620 aa	Known RBP	4.84	□□□□□ -1.63
YDL228C	YDL228C	YML083C	Q04526	418 aa		4.84	□□□□□ -1.63
YDL228C	YDL228C	RIM20	Q12033	661 aa		4.84	□□□□□ -1.63
YDL228C	YDL228C	CFT2	Q12102	859 aa	Predicted RBP	4.84	□□□□□ -1.63
YDL228C	YDL228C	RAD61	Q99359	647 aa		4.84	□□□□□ -1.63
YDL228C	YDL228C	MIP1	P15801	1254 aa		4.83	□□□□□ -1.64
YDL228C	YDL228C	SAM2	P19358	384 aa	Known RBP	4.83	□□□□□ -1.64
YDL228C	YDL228C	OPI1	P21957	404 aa		4.83	□□□□□ -1.64
YDL228C	YDL228C	PTK2	P47116	818 aa	Known RBP	4.83	□□□□□ -1.64
YDL228C	YDL228C	HDA1	P53973	706 aa		4.83	□□□□□ -1.64
YDL228C	YDL228C	RPS15	Q01855	142 aa	Known RBP	4.83	□□□□□ -1.64
YDL228C	YDL228C	YML037C	Q03703	340 aa		4.83	□□□□□ -1.64
YDL228C	YDL228C	UBX5	Q06682	500 aa		4.83	□□□□□ -1.64
YDL228C	YDL228C	TUS1	Q06412	1307 aa		4.82	□□□□□ -1.64
YDL228C	YDL228C	STE6	P12866	1290 aa		4.82	□□□□□ -1.64
YDL228C	YDL228C	ACE2	P21192	770 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 40 ms