RNA–Protein interactions for RNA: YBR135W

CKS1, Transcript of Cyclin-dependent protein kinase regulatory subunit and adaptor, yeastyeast

Gene CKS1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CKS1YBR135W CIT2P08679 460 aa6.71□□□□□ -1.34
CKS1YBR135W SAC7P17121 654 aa6.71□□□□□ -1.34
CKS1YBR135W SYP1P25623 870 aaKnown RBP6.71□□□□□ -1.34
CKS1YBR135W SBA1P28707 216 aaKnown RBP6.71□□□□□ -1.34
CKS1YBR135W SEA4P38164 1038 aa6.71□□□□□ -1.34
CKS1YBR135W HUL5P53119 910 aa6.71□□□□□ -1.34
CKS1YBR135W TY4B-PA0A0B7P3V8 1104 aa6.7□□□□□ -1.34
CKS1YBR135W AFG2P32794 780 aa6.7□□□□□ -1.34
CKS1YBR135W REI1P38344 393 aaPredicted RBP6.7□□□□□ -1.34
CKS1YBR135W BUD6P41697 788 aa6.7□□□□□ -1.34
CKS1YBR135W FAR11P53917 953 aa6.7□□□□□ -1.34
CKS1YBR135W RAT1Q02792 1006 aaKnown RBP6.7□□□□□ -1.34
CKS1YBR135W MTC5Q03897 1148 aa6.7□□□□□ -1.34
CKS1YBR135W TIF35Q04067 274 aaKnown RBP6.7□□□□□ -1.34
CKS1YBR135W SHE9Q04172 456 aa6.7□□□□□ -1.34
CKS1YBR135W ESC2Q06340 456 aa6.7□□□□□ -1.34
CKS1YBR135W TY4A-HQ6Q5P6 413 aa6.7□□□□□ -1.34
CKS1YBR135W NHA1Q99271 985 aa6.7□□□□□ -1.34
CKS1YBR135W ERS1P17261 260 aa6.69□□□□□ -1.34
CKS1YBR135W DBP5P20449 482 aaKnown RBP6.69□□□□□ -1.34
CKS1YBR135W ABD1P32783 436 aaPredicted RBP6.69□□□□□ -1.34
CKS1YBR135W PBP2P38151 413 aaKnown RBP RIP-Chip data6.69□□□□□ -1.34not detected
CKS1YBR135W OSW7P43611 510 aa6.69□□□□□ -1.34
CKS1YBR135W TIM54P47045 478 aa6.69□□□□□ -1.34
CKS1YBR135W RNH70P53331 553 aa6.69□□□□□ -1.34
CKS1YBR135W DOS2P54858 310 aa6.69□□□□□ -1.34
CKS1YBR135W YLL054CQ12244 843 aa6.69□□□□□ -1.34
CKS1YBR135W YOR131CQ12486 218 aa6.69□□□□□ -1.34
CKS1YBR135W STE5P32917 917 aa6.68□□□□□ -1.34
CKS1YBR135W MRP8P35719 219 aa6.68□□□□□ -1.34
CKS1YBR135W CNN1P43618 361 aa6.68□□□□□ -1.34
CKS1YBR135W SPO74P45819 413 aa6.68□□□□□ -1.34
CKS1YBR135W YLR225CQ05948 407 aaKnown RBP6.68□□□□□ -1.34
CKS1YBR135W INO1P11986 533 aa6.67□□□□□ -1.34
CKS1YBR135W MOT2P34909 587 aaKnown RBP6.67□□□□□ -1.34
CKS1YBR135W VBA5P36172 582 aa6.67□□□□□ -1.34
CKS1YBR135W YGR035CP53222 116 aa6.67□□□□□ -1.34
CKS1YBR135W PPM2Q08282 695 aa6.67□□□□□ -1.34
CKS1YBR135W RKM4Q12504 494 aa6.67□□□□□ -1.34
CKS1YBR135W MAE1P36013 669 aaKnown RBP6.66□□□□□ -1.34
CKS1YBR135W BRN1P38170 754 aa6.66□□□□□ -1.34
CKS1YBR135W ATG14P38270 344 aa6.66□□□□□ -1.34
CKS1YBR135W YBR184WP38299 523 aa6.66□□□□□ -1.34
CKS1YBR135W YHR020WP38708 688 aaKnown RBP6.66□□□□□ -1.34
CKS1YBR135W YAR028WP39548 234 aa6.66□□□□□ -1.34
CKS1YBR135W YMR074CQ04773 145 aa6.66□□□□□ -1.34
CKS1YBR135W AOS1Q06624 347 aa6.66□□□□□ -1.34
CKS1YBR135W ALG3P38179 458 aa6.65□□□□□ -1.34
CKS1YBR135W MPH1P40562 993 aa6.65□□□□□ -1.34
CKS1YBR135W YGR045CP53229 120 aa6.65□□□□□ -1.34
CKS1YBR135W YNR063WP53749 607 aa6.65□□□□□ -1.34
CKS1YBR135W DSE4P53753 1117 aa6.65□□□□□ -1.34
CKS1YBR135W FMP25Q08023 583 aa6.65□□□□□ -1.34
CKS1YBR135W ALG6Q12001 544 aaKnown RBP6.65□□□□□ -1.34
CKS1YBR135W YPL066WQ12194 479 aa6.65□□□□□ -1.34
CKS1YBR135W PUF4P25339 888 aaKnown RBP RIP-Chip data6.64□□□□□ -1.35 RIP-Chip
CKS1YBR135W RRP14P36080 434 aaKnown RBP6.64□□□□□ -1.35
CKS1YBR135W SPC42P36094 363 aa6.64□□□□□ -1.35
CKS1YBR135W RGD1P38339 666 aa6.64□□□□□ -1.35
CKS1YBR135W IRR1P40541 1150 aa6.64□□□□□ -1.35
CKS1YBR135W HNT2P49775 206 aa6.64□□□□□ -1.35
CKS1YBR135W SPO75Q07798 868 aa6.64□□□□□ -1.35
CKS1YBR135W AVO1Q08236 1176 aa6.64□□□□□ -1.35
CKS1YBR135W RPL8BP29453 256 aaKnown RBP6.63□□□□□ -1.35
CKS1YBR135W PPG1P32838 368 aa6.63□□□□□ -1.35
CKS1YBR135W YKL107WP34251 309 aa6.63□□□□□ -1.35
CKS1YBR135W MCM7P38132 845 aa6.63□□□□□ -1.35
CKS1YBR135W PBY1P38254 753 aa6.63□□□□□ -1.35
CKS1YBR135W PFD1P46988 109 aa6.63□□□□□ -1.35
CKS1YBR135W KIP3P53086 805 aaKnown RBP6.63□□□□□ -1.35
CKS1YBR135W ALG12P53730 551 aa6.63□□□□□ -1.35
CKS1YBR135W LAP2Q10740 671 aa6.63□□□□□ -1.35
CKS1YBR135W YOR223WQ12015 292 aa6.63□□□□□ -1.35
CKS1YBR135W PTC5Q12511 572 aa6.63□□□□□ -1.35
CKS1YBR135W PIN4P34217 668 aaKnown RBP RIP-Chip data6.62□□□□□ -1.35not detected
CKS1YBR135W HSE1P38753 452 aa6.62□□□□□ -1.35
CKS1YBR135W RRM3P38766 723 aa6.62□□□□□ -1.35
CKS1YBR135W YGL176CP46945 554 aa6.62□□□□□ -1.35
CKS1YBR135W VPS53P47061 822 aa6.62□□□□□ -1.35
CKS1YBR135W FLC1Q08967 793 aa6.62□□□□□ -1.35
CKS1YBR135W SBP1P10080 294 aaKnown RBP6.61□□□□□ -1.35
CKS1YBR135W SNF7P39929 240 aaKnown RBP6.61□□□□□ -1.35
CKS1YBR135W RSP5P39940 809 aaKnown RBP6.61□□□□□ -1.35
CKS1YBR135W ELA1P53861 379 aaPredicted RBP6.61□□□□□ -1.35
CKS1YBR135W DOT1Q04089 582 aaKnown RBP6.61□□□□□ -1.35
CKS1YBR135W TY1A-NL1Q12391 440 aaKnown RBP6.61□□□□□ -1.35
CKS1YBR135W OSH2Q12451 1283 aa6.61□□□□□ -1.35
CKS1YBR135W MLS1P30952 554 aa6.6□□□□□ -1.35
CKS1YBR135W BOI2P39969 1040 aa6.6□□□□□ -1.35
CKS1YBR135W CHZ1P40019 153 aaPredicted RBP6.6□□□□□ -1.35
CKS1YBR135W NUP82P40368 713 aa6.6□□□□□ -1.35
CKS1YBR135W ERP6P53198 216 aa6.6□□□□□ -1.35
CKS1YBR135W YGR125WP53273 1036 aa6.6□□□□□ -1.35
CKS1YBR135W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.6□□□□□ -1.35not detected
CKS1YBR135W RSA3Q05942 220 aaKnown RBP6.6□□□□□ -1.35
CKS1YBR135W GNT1Q12096 491 aa6.6□□□□□ -1.35
CKS1YBR135W CIT1P00890 479 aa6.59□□□□□ -1.35
CKS1YBR135W AI1P03875 834 aa6.59□□□□□ -1.35
CKS1YBR135W GAL11P19659 1081 aa6.59□□□□□ -1.35
CKS1YBR135W HSP60P19882 572 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms