RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C MYO5Q04439 1219 aaKnown RBP8.03□□□□□ -1.12
LDB7YBL006C SPN1Q06505 410 aaPredicted RBP8.03□□□□□ -1.12
LDB7YBL006C GUD1Q07729 489 aa8.03□□□□□ -1.12
LDB7YBL006C PHR1P05066 565 aaKnown RBP RIP-Chip data8.02□□□□□ -1.13not detected
LDB7YBL006C MIP1P15801 1254 aa8.02□□□□□ -1.13
LDB7YBL006C TKL1P23254 680 aaKnown RBP8.02□□□□□ -1.13
LDB7YBL006C RPL8BP29453 256 aaKnown RBP8.02□□□□□ -1.13
LDB7YBL006C RER2P35196 286 aa8.02□□□□□ -1.13
LDB7YBL006C VPS53P47061 822 aa8.02□□□□□ -1.13
LDB7YBL006C CLF1Q12309 687 aaPredicted RBP8.02□□□□□ -1.13
LDB7YBL006C MAK31P23059 88 aa8.01□□□□□ -1.13
LDB7YBL006C MCM4P30665 933 aaKnown RBP8.01□□□□□ -1.13
LDB7YBL006C TFC4P33339 1025 aa8.01□□□□□ -1.13
LDB7YBL006C NDT80P38830 627 aa8.01□□□□□ -1.13
LDB7YBL006C CTR1P49573 406 aa8.01□□□□□ -1.13
LDB7YBL006C TFC6Q06339 672 aa8.01□□□□□ -1.13
LDB7YBL006C TRM11Q12463 433 aa8.01□□□□□ -1.13
LDB7YBL006C HIP1P06775 603 aa8□□□□□ -1.13
LDB7YBL006C VAS1P07806 1104 aaKnown RBP8□□□□□ -1.13
LDB7YBL006C TIM23P32897 222 aa8□□□□□ -1.13
LDB7YBL006C DAK1P54838 584 aaKnown RBP8□□□□□ -1.13
LDB7YBL006C AHC1Q12433 566 aa8□□□□□ -1.13
LDB7YBL006C LDB19Q12502 818 aa8□□□□□ -1.13
LDB7YBL006C REG2P38232 338 aa7.99□□□□□ -1.13
LDB7YBL006C LSB1P53281 241 aa7.99□□□□□ -1.13
LDB7YBL006C FPR4Q06205 392 aaPredicted RBP7.99□□□□□ -1.13
LDB7YBL006C ISA1Q07821 250 aaPredicted RBP7.99□□□□□ -1.13
LDB7YBL006C RKM4Q12504 494 aa7.99□□□□□ -1.13
LDB7YBL006C YDR524C-BQ3E6R4 66 aa7.99□□□□□ -1.13
LDB7YBL006C HOP09932 586 aa7.98□□□□□ -1.13
LDB7YBL006C IMP2'P32351 346 aa7.98□□□□□ -1.13
LDB7YBL006C SEC8P32855 1065 aa7.98□□□□□ -1.13
LDB7YBL006C GPT2P36148 743 aa7.98□□□□□ -1.13
LDB7YBL006C GRS1P38088 690 aaKnown RBP7.98□□□□□ -1.13
LDB7YBL006C FLR1P38124 548 aa7.98□□□□□ -1.13
LDB7YBL006C CIC1P38779 376 aaKnown RBP7.98□□□□□ -1.13
LDB7YBL006C FMS1P50264 508 aa7.98□□□□□ -1.13
LDB7YBL006C LIF1P53150 421 aa7.98□□□□□ -1.13
LDB7YBL006C MDM1Q01846 1127 aa7.98□□□□□ -1.13
LDB7YBL006C RTP1Q12751 981 aa7.98□□□□□ -1.13
LDB7YBL006C HEM1P09950 548 aaPredicted RBP7.97□□□□□ -1.13
LDB7YBL006C PEP3P27801 918 aa7.97□□□□□ -1.13
LDB7YBL006C MSC7P38694 644 aa7.97□□□□□ -1.13
LDB7YBL006C PTA1Q01329 785 aaPredicted RBP7.97□□□□□ -1.13
LDB7YBL006C DSE3Q08729 430 aa7.97□□□□□ -1.13
LDB7YBL006C PGA3Q12746 312 aaKnown RBP7.97□□□□□ -1.13
LDB7YBL006C YOR111WQ99210 232 aa7.97□□□□□ -1.13
LDB7YBL006C SEC20P28791 383 aa7.96□□□□□ -1.14
LDB7YBL006C UGA4P32837 571 aa7.96□□□□□ -1.14
LDB7YBL006C BRN1P38170 754 aa7.96□□□□□ -1.14
LDB7YBL006C EST2Q06163 884 aa7.96□□□□□ -1.14
LDB7YBL006C YLR326WQ06170 240 aaKnown RBP7.96□□□□□ -1.14
LDB7YBL006C YDR034W-BQ6Q5X2 51 aa7.96□□□□□ -1.14
LDB7YBL006C FKS1P38631 1876 aaKnown RBP7.96□□□□□ -1.14
LDB7YBL006C TY1B-AO13527 1196 aaKnown RBP7.95□□□□□ -1.14
LDB7YBL006C MAS2P11914 482 aa7.95□□□□□ -1.14
LDB7YBL006C RNR3P21672 869 aaKnown RBP7.95□□□□□ -1.14
LDB7YBL006C POT1P27796 417 aaKnown RBP RIP-Chip data7.95□□□□□ -1.14not detected
LDB7YBL006C ALG2P43636 503 aa7.95□□□□□ -1.14
LDB7YBL006C FOL2P51601 243 aaKnown RBP7.95□□□□□ -1.14
LDB7YBL006C VPS72Q03388 795 aa7.95□□□□□ -1.14
LDB7YBL006C VIP1Q06685 1146 aaKnown RBP7.95□□□□□ -1.14
LDB7YBL006C TFC8Q12308 588 aa7.95□□□□□ -1.14
LDB7YBL006C TOR2P32600 2474 aaKnown RBP7.95□□□□□ -1.14
LDB7YBL006C RIF1P29539 1916 aa7.95□□□□□ -1.14
LDB7YBL006C SNA3P14359 133 aa7.94□□□□□ -1.14
LDB7YBL006C TPM1P17536 199 aaKnown RBP7.94□□□□□ -1.14
LDB7YBL006C RPS7BP48164 190 aaKnown RBP7.94□□□□□ -1.14
LDB7YBL006C HXT17P53631 564 aa7.94□□□□□ -1.14
LDB7YBL006C YMR084WA2P2R3 262 aa7.93□□□□□ -1.14
LDB7YBL006C RPL8AP17076 256 aaKnown RBP7.93□□□□□ -1.14
LDB7YBL006C PAN5P38787 379 aa7.93□□□□□ -1.14
LDB7YBL006C ESF1Q06344 628 aaKnown RBP7.93□□□□□ -1.14
LDB7YBL006C DUR3P33413 735 aa7.92□□□□□ -1.14
LDB7YBL006C TPM2P40414 161 aa7.92□□□□□ -1.14
LDB7YBL006C GCR2Q01722 534 aa7.92□□□□□ -1.14
LDB7YBL006C ECM23Q02710 187 aa7.92□□□□□ -1.14
LDB7YBL006C MSC2Q03455 724 aa7.92□□□□□ -1.14
LDB7YBL006C BRL1P38770 471 aa7.91□□□□□ -1.14
LDB7YBL006C SGM1P47166 707 aa7.91□□□□□ -1.14
LDB7YBL006C AZR1P50080 613 aa7.91□□□□□ -1.14
LDB7YBL006C ASE1P50275 885 aa7.91□□□□□ -1.14
LDB7YBL006C YNL115CP53925 644 aa7.91□□□□□ -1.14
LDB7YBL006C WHI4Q07655 649 aaKnown RBP7.91□□□□□ -1.14
LDB7YBL006C ATG11Q12527 1178 aa7.91□□□□□ -1.14
LDB7YBL006C CIT1P00890 479 aa7.9□□□□□ -1.14
LDB7YBL006C CAD1P24813 409 aaKnown RBP7.9□□□□□ -1.14
LDB7YBL006C KIN82P25341 720 aa7.9□□□□□ -1.14
LDB7YBL006C SUL1P38359 859 aa7.9□□□□□ -1.14
LDB7YBL006C HXT13P39924 564 aa7.9□□□□□ -1.14
LDB7YBL006C UBP15P50101 1230 aa7.9□□□□□ -1.14
LDB7YBL006C YLL058WQ12198 575 aa7.9□□□□□ -1.14
LDB7YBL006C PWP2P25635 923 aaKnown RBP7.89□□□□□ -1.15
LDB7YBL006C POA1P38218 177 aa7.89□□□□□ -1.15
LDB7YBL006C TVP23P38962 199 aa7.89□□□□□ -1.15
LDB7YBL006C AKR1P39010 764 aa7.89□□□□□ -1.15
LDB7YBL006C YML020WQ03722 664 aa7.89□□□□□ -1.15
LDB7YBL006C YDR341CQ05506 607 aaKnown RBP7.89□□□□□ -1.15
LDB7YBL006C ARP6Q12509 438 aa7.89□□□□□ -1.15
LDB7YBL006C CLB5P30283 435 aa7.88□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 12 ms