RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Uhrf1bp1lA2RSJ4 1457 aa23.51■■□□□ 1.35
Ccdc50-201ENSMUST00000039443 Pip4k2bQ80XI4 416 aa23.51■■□□□ 1.35
Ccdc50-201ENSMUST00000039443 Ric3Q8BPM6 367 aa23.51■■□□□ 1.35
Ccdc50-201ENSMUST00000039443 Bag4Q8CI61 457 aa23.51■■□□□ 1.35
Ccdc50-201ENSMUST00000039443 Birc3O08863 600 aa23.5■■□□□ 1.35
Ccdc50-201ENSMUST00000039443 Zkscan1Q8BGS3 561 aaKnown RBP23.5■■□□□ 1.35
Ccdc50-201ENSMUST00000039443 Cdk12Q14AX6 1484 aaKnown RBP23.5■■□□□ 1.35
Ccdc50-201ENSMUST00000039443 Elp1Q7TT37 1333 aaKnown RBP23.49■■□□□ 1.35
Ccdc50-201ENSMUST00000039443 Tm6sf1P58749 370 aa23.49■■□□□ 1.35
Ccdc50-201ENSMUST00000039443 Tmx3Q8BXZ1 456 aa23.49■■□□□ 1.35
Ccdc50-201ENSMUST00000039443 Rsph6aQ8CDR2 708 aa23.49■■□□□ 1.35
Ccdc50-201ENSMUST00000039443 Rapgef3Q8VCC8 918 aa23.48■■□□□ 1.35
Ccdc50-201ENSMUST00000039443 Cps1Q8C196 1500 aa23.47■■□□□ 1.35
Ccdc50-201ENSMUST00000039443 Thsd7aQ69ZU6 1645 aa23.47■■□□□ 1.35
Ccdc50-201ENSMUST00000039443 Ccdc146E9Q9F7 977 aa23.47■■□□□ 1.35
Ccdc50-201ENSMUST00000039443 ImpactO55091 318 aa23.47■■□□□ 1.35
Ccdc50-201ENSMUST00000039443 Nucb1Q02819 459 aaKnown RBP23.46■■□□□ 1.35
Ccdc50-201ENSMUST00000039443 Ppp6r3Q922D4 844 aa23.46■■□□□ 1.35
Ccdc50-201ENSMUST00000039443 Bloc1s4Q8VED2 215 aa23.45■■□□□ 1.35
Ccdc50-201ENSMUST00000039443 Kif24Q6NWW5 1356 aa23.44■■□□□ 1.34
Ccdc50-201ENSMUST00000039443 Idi2Q8BFZ6 227 aa23.44■■□□□ 1.34
Ccdc50-201ENSMUST00000039443 Cabp2Q9JLK4 216 aa23.44■■□□□ 1.34
Ccdc50-201ENSMUST00000039443 U2surpQ6NV83 1029 aaKnown RBP23.43■■□□□ 1.34
Ccdc50-201ENSMUST00000039443 PtpruB1AUH1 1446 aa23.43■■□□□ 1.34
Ccdc50-201ENSMUST00000039443 Mdc1Q5PSV9 1707 aa23.42■■□□□ 1.34
Ccdc50-201ENSMUST00000039443 Pdia3P27773 505 aaKnown RBP23.42■■□□□ 1.34
Ccdc50-201ENSMUST00000039443 Fam13aQ8BGI4 693 aa23.42■■□□□ 1.34
Ccdc50-201ENSMUST00000039443 FanclQ9CR14 375 aa23.41■■□□□ 1.34
Ccdc50-201ENSMUST00000039443 Rnf123Q5XPI3 1314 aa23.41■■□□□ 1.34
Ccdc50-201ENSMUST00000039443 HnrnpmQ9D0E1 729 aaKnown RBP23.41■■□□□ 1.34
Ccdc50-201ENSMUST00000039443 Triml2E9PW10 424 aa23.4■■□□□ 1.34
Ccdc50-201ENSMUST00000039443 Tpm2P58774 284 aa23.4■■□□□ 1.34
Ccdc50-201ENSMUST00000039443 Stk31Q99MW1 1018 aa23.4■■□□□ 1.34
Ccdc50-201ENSMUST00000039443 Pdcl2Q78Y63 240 aa23.4■■□□□ 1.34
Ccdc50-201ENSMUST00000039443 Chl1P70232 1209 aa23.39■■□□□ 1.33
Ccdc50-201ENSMUST00000039443 Clcn1Q64347 994 aa23.38■■□□□ 1.33
Ccdc50-201ENSMUST00000039443 PogkQ80TC5 607 aa23.38■■□□□ 1.33
Ccdc50-201ENSMUST00000039443 Mrps27Q8BK72 415 aaKnown RBP23.38■■□□□ 1.33
Ccdc50-201ENSMUST00000039443 Rasa1E9PYG6 1038 aa23.38■■□□□ 1.33
Ccdc50-201ENSMUST00000039443 Frmpd2A0A140LI67 1392 aa23.37■■□□□ 1.33
Ccdc50-201ENSMUST00000039443 Zfp777B9EKF4 885 aa23.37■■□□□ 1.33
Ccdc50-201ENSMUST00000039443 Dmrtc1Q9D9R7 182 aa23.37■■□□□ 1.33
Ccdc50-201ENSMUST00000039443 Cyp27a1Q9DBG1 533 aa23.37■■□□□ 1.33
Ccdc50-201ENSMUST00000039443 Tns3Q5SSZ5 1440 aa23.36■■□□□ 1.33
Ccdc50-201ENSMUST00000039443 Phf23Q8BSN5 401 aa23.35■■□□□ 1.33
Ccdc50-201ENSMUST00000039443 Fez1Q8K0X8 392 aa23.35■■□□□ 1.33
Ccdc50-201ENSMUST00000039443 Glipr1l2Q9CQ35 332 aa23.35■■□□□ 1.33
Ccdc50-201ENSMUST00000039443 Cyp46a1Q9WVK8 500 aa23.35■■□□□ 1.33
Ccdc50-201ENSMUST00000039443 Adgrb1Q3UHD1 1582 aa23.35■■□□□ 1.33
Ccdc50-201ENSMUST00000039443 Hoxa7P02830 229 aa23.34■■□□□ 1.33
Ccdc50-201ENSMUST00000039443 Mcm10Q0VBD2 885 aa23.34■■□□□ 1.33
Ccdc50-201ENSMUST00000039443 Erc2Q6PH08 957 aa23.34■■□□□ 1.33
Ccdc50-201ENSMUST00000039443 DmtnQ9WV69 405 aa23.34■■□□□ 1.33
Ccdc50-201ENSMUST00000039443 CatipB9EKE5 520 aa23.33■■□□□ 1.33
Ccdc50-201ENSMUST00000039443 PtmaP26350 111 aa23.33■■□□□ 1.33
Ccdc50-201ENSMUST00000039443 Prkar2bP31324 416 aa23.32■■□□□ 1.32
Ccdc50-201ENSMUST00000039443 Klhdc4Q921I2 584 aa23.31■■□□□ 1.32
Ccdc50-201ENSMUST00000039443 Ap3b2Q9JME5 1082 aa23.31■■□□□ 1.32
Ccdc50-201ENSMUST00000039443 Dhx16G3X8X0 1044 aaKnown RBP23.31■■□□□ 1.32
Ccdc50-201ENSMUST00000039443 Gli3Q61602 1583 aa23.31■■□□□ 1.32
Ccdc50-201ENSMUST00000039443 4931400O07RikQ9D4M5 137 aa23.3■■□□□ 1.32
Ccdc50-201ENSMUST00000039443 Unc13bQ9Z1N9 1602 aa23.3■■□□□ 1.32
Ccdc50-201ENSMUST00000039443 Astn2Q80Z10 1352 aa23.3■■□□□ 1.32
Ccdc50-201ENSMUST00000039443 Tnrc6bQ8BKI2 1810 aaKnown RBP23.29■■□□□ 1.32
Ccdc50-201ENSMUST00000039443 Atg4a-psA0A0G2JFS9 396 aa23.29■■□□□ 1.32
Ccdc50-201ENSMUST00000039443 Atg4aQ8C9S8 396 aa23.29■■□□□ 1.32
Ccdc50-201ENSMUST00000039443 Ush1cQ9ES64 910 aa23.29■■□□□ 1.32
Ccdc50-201ENSMUST00000039443 Chd4Q6PDQ2 1915 aaKnown RBP23.29■■□□□ 1.32
Ccdc50-201ENSMUST00000039443 Rreb1Q3UH06 1700 aaKnown RBP23.28■■□□□ 1.32
Ccdc50-201ENSMUST00000039443 Eif4a2P10630 407 aa23.28■■□□□ 1.32
Ccdc50-201ENSMUST00000039443 VgfQ0VGU4 617 aa23.28■■□□□ 1.32
Ccdc50-201ENSMUST00000039443 Senp3Q9EP97 568 aaKnown RBP23.28■■□□□ 1.32
Ccdc50-201ENSMUST00000039443 Zkscan2G3X952 960 aa23.28■■□□□ 1.32
Ccdc50-201ENSMUST00000039443 Q9D2X8 372 aa23.27■■□□□ 1.32
Ccdc50-201ENSMUST00000039443 Atp6v1dP57746 247 aa23.27■■□□□ 1.32
Ccdc50-201ENSMUST00000039443 Aifm3Q3TY86 605 aa23.27■■□□□ 1.32
Ccdc50-201ENSMUST00000039443 Ecm2Q5FW85 670 aa23.27■■□□□ 1.32
Ccdc50-201ENSMUST00000039443 Smarca5Q91ZW3 1051 aaKnown RBP23.27■■□□□ 1.32
Ccdc50-201ENSMUST00000039443 Tex2Q6ZPJ0 1128 aaKnown RBP23.26■■□□□ 1.31
Ccdc50-201ENSMUST00000039443 Erich6bQ9D4S6 220 aa23.26■■□□□ 1.31
Ccdc50-201ENSMUST00000039443 Col18a1P39061 1774 aa23.26■■□□□ 1.31
Ccdc50-201ENSMUST00000039443 MccE9PWI3 1003 aa23.25■■□□□ 1.31
Ccdc50-201ENSMUST00000039443 Q3UJC8 639 aa23.25■■□□□ 1.31
Ccdc50-201ENSMUST00000039443 AnlnQ8K298 1121 aaKnown RBP23.25■■□□□ 1.31
Ccdc50-201ENSMUST00000039443 Tmem94Q7TSH8 1360 aa23.24■■□□□ 1.31
Ccdc50-201ENSMUST00000039443 Zkscan16A2ALW2 728 aa23.24■■□□□ 1.31
Ccdc50-201ENSMUST00000039443 Vsig10D3YX43 558 aa23.24■■□□□ 1.31
Ccdc50-201ENSMUST00000039443 Znf316Q6PGE4 1016 aa23.24■■□□□ 1.31
Ccdc50-201ENSMUST00000039443 Slit2Q9R1B9 1521 aa23.24■■□□□ 1.31
Ccdc50-201ENSMUST00000039443 Col14a1Q80X19 1797 aa23.24■■□□□ 1.31
Ccdc50-201ENSMUST00000039443 Tet3Q8BG87 1668 aa23.23■■□□□ 1.31
Ccdc50-201ENSMUST00000039443 Becn1O88597 448 aa23.23■■□□□ 1.31
Ccdc50-201ENSMUST00000039443 Zdhhc9P59268 364 aa23.23■■□□□ 1.31
Ccdc50-201ENSMUST00000039443 LlphQ9D945 130 aaKnown RBP23.23■■□□□ 1.31
Ccdc50-201ENSMUST00000039443 D430041D05RikF6ZGR6 1678 aa23.23■■□□□ 1.31
Ccdc50-201ENSMUST00000039443 Znf335A2A5K6 1337 aa23.23■■□□□ 1.31
Ccdc50-201ENSMUST00000039443 Vwa3bJ9JI28 736 aa23.23■■□□□ 1.31
Ccdc50-201ENSMUST00000039443 NexnQ7TPW1 607 aa23.23■■□□□ 1.31
Ccdc50-201ENSMUST00000039443 Anapc15P60007 132 aa23.22■■□□□ 1.31
Ccdc50-201ENSMUST00000039443 MpripP97434 1024 aa23.22■■□□□ 1.31
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms