Protein–RNA interactions for Protein: O88597

Becn1, Beclin-1, mousemouse

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Becn1O88597 Gm25239-201ENSMUST00000174915 86 ntBASIC38,93■■■■□ 3,82
Becn1O88597 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC38,77■■■■□ 3,8
Becn1O88597 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC37,44■■■■□ 3,58
Becn1O88597 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC37,34■■■■□ 3,57
Becn1O88597 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36,99■■■■□ 3,51
Becn1O88597 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC36,72■■■■□ 3,47
Becn1O88597 Psd-208ENSMUST00000224556 2034 ntBASIC36,7■■■■□ 3,47
Becn1O88597 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35,86■■■■□ 3,33
Becn1O88597 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC35,41■■■■□ 3,26
Becn1O88597 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC35■■■■□ 3,19
Becn1O88597 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34,91■■■■□ 3,18
Becn1O88597 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC34,89■■■■□ 3,18
Becn1O88597 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC34,84■■■■□ 3,17
Becn1O88597 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC34,78■■■■□ 3,16
Becn1O88597 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC34,74■■■■□ 3,15
Becn1O88597 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC34,67■■■■□ 3,14
Becn1O88597 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC34,49■■■■□ 3,11
Becn1O88597 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC34,4■■■■□ 3,1
Becn1O88597 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC34,37■■■■□ 3,09
Becn1O88597 Gm15042-201ENSMUST00000120212 883 ntBASIC34,3■■■■□ 3,08
Becn1O88597 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34,19■■■■□ 3,06
Becn1O88597 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC33,9■■■■□ 3,02
Becn1O88597 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC33,73■■■□□ 2,99
Becn1O88597 Gm24109-201ENSMUST00000175489 103 ntBASIC33,59■■■□□ 2,97
Becn1O88597 Gm15045-201ENSMUST00000117359 883 ntBASIC33,57■■■□□ 2,96
Becn1O88597 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC33,49■■■□□ 2,95
Becn1O88597 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC33,46■■■□□ 2,95
Becn1O88597 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC33,46■■■□□ 2,95
Becn1O88597 Gm42596-201ENSMUST00000196305 1958 ntBASIC33,45■■■□□ 2,95
Becn1O88597 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33,44■■■□□ 2,94
Becn1O88597 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC33,24■■■□□ 2,91
Becn1O88597 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC33,23■■■□□ 2,91
Becn1O88597 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC33,21■■■□□ 2,91
Becn1O88597 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33,2■■■□□ 2,91
Becn1O88597 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC33,18■■■□□ 2,9
Becn1O88597 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC33,15■■■□□ 2,9
Becn1O88597 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC33,15■■■□□ 2,9
Becn1O88597 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC33,12■■■□□ 2,89
Becn1O88597 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC32,93■■■□□ 2,86
Becn1O88597 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32,83■■■□□ 2,85
Becn1O88597 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC32,66■■■□□ 2,82
Becn1O88597 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC32,63■■■□□ 2,81
Becn1O88597 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32,59■■■□□ 2,81
Becn1O88597 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32,58■■■□□ 2,81
Becn1O88597 Gm23366-201ENSMUST00000175022 89 ntBASIC32,56■■■□□ 2,8
Becn1O88597 Gm10524-201ENSMUST00000181931 1893 ntBASIC32,52■■■□□ 2,8
Becn1O88597 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC32,48■■■□□ 2,79
Becn1O88597 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32,37■■■□□ 2,77
Becn1O88597 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC32,37■■■□□ 2,77
Becn1O88597 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32,34■■■□□ 2,77
Becn1O88597 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC32,32■■■□□ 2,76
Becn1O88597 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC32,24■■■□□ 2,75
Becn1O88597 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32,15■■■□□ 2,74
Becn1O88597 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC32,14■■■□□ 2,74
Becn1O88597 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC32,05■■■□□ 2,72
Becn1O88597 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32,02■■■□□ 2,72
Becn1O88597 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32,01■■■□□ 2,71
Becn1O88597 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31,98■■■□□ 2,71
Becn1O88597 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31,96■■■□□ 2,71
Becn1O88597 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31,95■■■□□ 2,7
Becn1O88597 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31,92■■■□□ 2,7
Becn1O88597 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC31,85■■■□□ 2,69
Becn1O88597 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC31,79■■■□□ 2,68
Becn1O88597 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31,78■■■□□ 2,68
Becn1O88597 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC31,77■■■□□ 2,68
Becn1O88597 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC31,76■■■□□ 2,67
Becn1O88597 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC31,73■■■□□ 2,67
Becn1O88597 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31,72■■■□□ 2,67
Becn1O88597 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC31,69■■■□□ 2,66
Becn1O88597 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC31,68■■■□□ 2,66
Becn1O88597 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31,63■■■□□ 2,65
Becn1O88597 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31,63■■■□□ 2,65
Becn1O88597 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC31,63■■■□□ 2,65
Becn1O88597 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31,62■■■□□ 2,65
Becn1O88597 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC31,62■■■□□ 2,65
Becn1O88597 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31,59■■■□□ 2,65
Becn1O88597 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31,58■■■□□ 2,65
Becn1O88597 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC31,55■■■□□ 2,64
Becn1O88597 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31,49■■■□□ 2,63
Becn1O88597 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC31,47■■■□□ 2,63
Becn1O88597 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC31,46■■■□□ 2,63
Becn1O88597 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC31,43■■■□□ 2,62
Becn1O88597 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31,42■■■□□ 2,62
Becn1O88597 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC31,41■■■□□ 2,62
Becn1O88597 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31,41■■■□□ 2,62
Becn1O88597 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31,39■■■□□ 2,62
Becn1O88597 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC31,3■■■□□ 2,6
Becn1O88597 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC31,28■■■□□ 2,6
Becn1O88597 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC31,21■■■□□ 2,59
Becn1O88597 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC31,2■■■□□ 2,59
Becn1O88597 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31,18■■■□□ 2,58
Becn1O88597 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC31,17■■■□□ 2,58
Becn1O88597 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31,15■■■□□ 2,58
Becn1O88597 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31,14■■■□□ 2,58
Becn1O88597 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC31,14■■■□□ 2,58
Becn1O88597 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC31,09■■■□□ 2,57
Becn1O88597 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31,07■■■□□ 2,56
Becn1O88597 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC31,05■■■□□ 2,56
Becn1O88597 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC31,02■■■□□ 2,56
Becn1O88597 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC31,01■■■□□ 2,56
Retrieved 100 of 76,532 protein–RNA pairs in 9,9 ms