Protein–RNA interactions for Protein: Q8VED2

Bloc1s4, Biogenesis of lysosome-related organelles complex 1 subunit 4, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bloc1s4Q8VED2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC40,86■■■■■ 4,13
Bloc1s4Q8VED2 Gm25239-201ENSMUST00000174915 86 ntBASIC40,13■■■■■ 4,01
Bloc1s4Q8VED2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC39,34■■■■□ 3,89
Bloc1s4Q8VED2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC39,32■■■■□ 3,88
Bloc1s4Q8VED2 Psd-208ENSMUST00000224556 2034 ntBASIC38,33■■■■□ 3,73
Bloc1s4Q8VED2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC37,91■■■■□ 3,66
Bloc1s4Q8VED2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC37,46■■■■□ 3,59
Bloc1s4Q8VED2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC37,38■■■■□ 3,57
Bloc1s4Q8VED2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC37,09■■■■□ 3,53
Bloc1s4Q8VED2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC36,62■■■■□ 3,45
Bloc1s4Q8VED2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36,57■■■■□ 3,44
Bloc1s4Q8VED2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC36,51■■■■□ 3,43
Bloc1s4Q8VED2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC36,47■■■■□ 3,43
Bloc1s4Q8VED2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC36,44■■■■□ 3,42
Bloc1s4Q8VED2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC36,17■■■■□ 3,38
Bloc1s4Q8VED2 Gm15042-201ENSMUST00000120212 883 ntBASIC36,15■■■■□ 3,38
Bloc1s4Q8VED2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36,11■■■■□ 3,37
Bloc1s4Q8VED2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC36,01■■■■□ 3,36
Bloc1s4Q8VED2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC35,99■■■■□ 3,35
Bloc1s4Q8VED2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC35,74■■■■□ 3,31
Bloc1s4Q8VED2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC35,73■■■■□ 3,31
Bloc1s4Q8VED2 Gm15045-201ENSMUST00000117359 883 ntBASIC35,63■■■■□ 3,29
Bloc1s4Q8VED2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC35,54■■■■□ 3,28
Bloc1s4Q8VED2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC35,5■■■■□ 3,27
Bloc1s4Q8VED2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC35,25■■■■□ 3,23
Bloc1s4Q8VED2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC35,24■■■■□ 3,23
Bloc1s4Q8VED2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC35,21■■■■□ 3,23
Bloc1s4Q8VED2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC35,19■■■■□ 3,22
Bloc1s4Q8VED2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC35,02■■■■□ 3,2
Bloc1s4Q8VED2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC35,02■■■■□ 3,2
Bloc1s4Q8VED2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC35■■■■□ 3,19
Bloc1s4Q8VED2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC34,91■■■■□ 3,18
Bloc1s4Q8VED2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34,9■■■■□ 3,18
Bloc1s4Q8VED2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC34,88■■■■□ 3,17
Bloc1s4Q8VED2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC34,84■■■■□ 3,17
Bloc1s4Q8VED2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC34,65■■■■□ 3,14
Bloc1s4Q8VED2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34,53■■■■□ 3,12
Bloc1s4Q8VED2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC34,51■■■■□ 3,11
Bloc1s4Q8VED2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC34,49■■■■□ 3,11
Bloc1s4Q8VED2 Gm10524-201ENSMUST00000181931 1893 ntBASIC34,46■■■■□ 3,11
Bloc1s4Q8VED2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC34,45■■■■□ 3,11
Bloc1s4Q8VED2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34,44■■■■□ 3,1
Bloc1s4Q8VED2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC34,39■■■■□ 3,1
Bloc1s4Q8VED2 Gm24109-201ENSMUST00000175489 103 ntBASIC34,34■■■■□ 3,09
Bloc1s4Q8VED2 Gm42596-201ENSMUST00000196305 1958 ntBASIC34,2■■■■□ 3,07
Bloc1s4Q8VED2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC34,16■■■■□ 3,06
Bloc1s4Q8VED2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC34,16■■■■□ 3,06
Bloc1s4Q8VED2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC34,13■■■■□ 3,05
Bloc1s4Q8VED2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC34,12■■■■□ 3,05
Bloc1s4Q8VED2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC33,98■■■■□ 3,03
Bloc1s4Q8VED2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC33,93■■■■□ 3,02
Bloc1s4Q8VED2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC33,84■■■■□ 3,01
Bloc1s4Q8VED2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC33,81■■■■□ 3
Bloc1s4Q8VED2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC33,8■■■■□ 3
Bloc1s4Q8VED2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33,76■■■□□ 2,99
Bloc1s4Q8VED2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC33,67■■■□□ 2,98
Bloc1s4Q8VED2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC33,64■■■□□ 2,98
Bloc1s4Q8VED2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC33,6■■■□□ 2,97
Bloc1s4Q8VED2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33,6■■■□□ 2,97
Bloc1s4Q8VED2 Gm23366-201ENSMUST00000175022 89 ntBASIC33,58■■■□□ 2,97
Bloc1s4Q8VED2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC33,57■■■□□ 2,96
Bloc1s4Q8VED2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC33,55■■■□□ 2,96
Bloc1s4Q8VED2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC33,51■■■□□ 2,96
Bloc1s4Q8VED2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC33,45■■■□□ 2,95
Bloc1s4Q8VED2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33,4■■■□□ 2,94
Bloc1s4Q8VED2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC33,35■■■□□ 2,93
Bloc1s4Q8VED2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC33,31■■■□□ 2,92
Bloc1s4Q8VED2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC33,28■■■□□ 2,92
Bloc1s4Q8VED2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC33,24■■■□□ 2,91
Bloc1s4Q8VED2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33,24■■■□□ 2,91
Bloc1s4Q8VED2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC33,17■■■□□ 2,9
Bloc1s4Q8VED2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC33,13■■■□□ 2,89
Bloc1s4Q8VED2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC33,13■■■□□ 2,89
Bloc1s4Q8VED2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33,09■■■□□ 2,89
Bloc1s4Q8VED2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33,01■■■□□ 2,87
Bloc1s4Q8VED2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC33■■■□□ 2,87
Bloc1s4Q8VED2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC32,98■■■□□ 2,87
Bloc1s4Q8VED2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC32,96■■■□□ 2,87
Bloc1s4Q8VED2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32,89■■■□□ 2,86
Bloc1s4Q8VED2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC32,87■■■□□ 2,85
Bloc1s4Q8VED2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32,84■■■□□ 2,85
Bloc1s4Q8VED2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC32,8■■■□□ 2,84
Bloc1s4Q8VED2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32,79■■■□□ 2,84
Bloc1s4Q8VED2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32,76■■■□□ 2,83
Bloc1s4Q8VED2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC32,69■■■□□ 2,82
Bloc1s4Q8VED2 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC32,66■■■□□ 2,82
Bloc1s4Q8VED2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32,66■■■□□ 2,82
Bloc1s4Q8VED2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC32,57■■■□□ 2,8
Bloc1s4Q8VED2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC32,53■■■□□ 2,8
Bloc1s4Q8VED2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32,48■■■□□ 2,79
Bloc1s4Q8VED2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC32,42■■■□□ 2,78
Bloc1s4Q8VED2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC32,42■■■□□ 2,78
Bloc1s4Q8VED2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC32,39■■■□□ 2,78
Bloc1s4Q8VED2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC32,38■■■□□ 2,77
Bloc1s4Q8VED2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC32,35■■■□□ 2,77
Bloc1s4Q8VED2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC32,34■■■□□ 2,77
Bloc1s4Q8VED2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC32,32■■■□□ 2,76
Bloc1s4Q8VED2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC32,32■■■□□ 2,76
Bloc1s4Q8VED2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC32,3■■■□□ 2,76
Bloc1s4Q8VED2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC32,29■■■□□ 2,76
Retrieved 100 of 76,532 protein–RNA pairs in 15,2 ms