Protein–RNA interactions for Protein: Q8VED2

Bloc1s4, Biogenesis of lysosome-related organelles complex 1 subunit 4, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bloc1s4Q8VED2 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC40.86■■■■■ 4.13
Bloc1s4Q8VED2 Gm25239-201ENSMUST00000174915 86 ntBASIC40.13■■■■■ 4.01
Bloc1s4Q8VED2 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC39.34■■■■□ 3.89
Bloc1s4Q8VED2 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC39.32■■■■□ 3.88
Bloc1s4Q8VED2 Psd-208ENSMUST00000224556 2034 ntBASIC38.33■■■■□ 3.73
Bloc1s4Q8VED2 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC37.91■■■■□ 3.66
Bloc1s4Q8VED2 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC37.46■■■■□ 3.59
Bloc1s4Q8VED2 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC37.38■■■■□ 3.57
Bloc1s4Q8VED2 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC37.09■■■■□ 3.53
Bloc1s4Q8VED2 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC36.62■■■■□ 3.45
Bloc1s4Q8VED2 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC36.57■■■■□ 3.44
Bloc1s4Q8VED2 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC36.51■■■■□ 3.43
Bloc1s4Q8VED2 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC36.47■■■■□ 3.43
Bloc1s4Q8VED2 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC36.44■■■■□ 3.42
Bloc1s4Q8VED2 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC36.17■■■■□ 3.38
Bloc1s4Q8VED2 Gm15042-201ENSMUST00000120212 883 ntBASIC36.15■■■■□ 3.38
Bloc1s4Q8VED2 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.11■■■■□ 3.37
Bloc1s4Q8VED2 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC36.01■■■■□ 3.36
Bloc1s4Q8VED2 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC35.99■■■■□ 3.35
Bloc1s4Q8VED2 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC35.74■■■■□ 3.31
Bloc1s4Q8VED2 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC35.73■■■■□ 3.31
Bloc1s4Q8VED2 Gm15045-201ENSMUST00000117359 883 ntBASIC35.63■■■■□ 3.29
Bloc1s4Q8VED2 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC35.54■■■■□ 3.28
Bloc1s4Q8VED2 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC35.5■■■■□ 3.27
Bloc1s4Q8VED2 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC35.25■■■■□ 3.23
Bloc1s4Q8VED2 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
Bloc1s4Q8VED2 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC35.21■■■■□ 3.23
Bloc1s4Q8VED2 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC35.19■■■■□ 3.22
Bloc1s4Q8VED2 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC35.02■■■■□ 3.2
Bloc1s4Q8VED2 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
Bloc1s4Q8VED2 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC35■■■■□ 3.19
Bloc1s4Q8VED2 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC34.91■■■■□ 3.18
Bloc1s4Q8VED2 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.9■■■■□ 3.18
Bloc1s4Q8VED2 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC34.88■■■■□ 3.17
Bloc1s4Q8VED2 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC34.84■■■■□ 3.17
Bloc1s4Q8VED2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
Bloc1s4Q8VED2 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Bloc1s4Q8VED2 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC34.51■■■■□ 3.11
Bloc1s4Q8VED2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
Bloc1s4Q8VED2 Gm10524-201ENSMUST00000181931 1893 ntBASIC34.46■■■■□ 3.11
Bloc1s4Q8VED2 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
Bloc1s4Q8VED2 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
Bloc1s4Q8VED2 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Bloc1s4Q8VED2 Gm24109-201ENSMUST00000175489 103 ntBASIC34.34■■■■□ 3.09
Bloc1s4Q8VED2 Gm42596-201ENSMUST00000196305 1958 ntBASIC34.2■■■■□ 3.07
Bloc1s4Q8VED2 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC34.16■■■■□ 3.06
Bloc1s4Q8VED2 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC34.16■■■■□ 3.06
Bloc1s4Q8VED2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
Bloc1s4Q8VED2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC34.12■■■■□ 3.05
Bloc1s4Q8VED2 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
Bloc1s4Q8VED2 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC33.93■■■■□ 3.02
Bloc1s4Q8VED2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC33.84■■■■□ 3.01
Bloc1s4Q8VED2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC33.81■■■■□ 3
Bloc1s4Q8VED2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC33.8■■■■□ 3
Bloc1s4Q8VED2 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC33.76■■■□□ 2.99
Bloc1s4Q8VED2 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
Bloc1s4Q8VED2 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC33.64■■■□□ 2.98
Bloc1s4Q8VED2 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC33.6■■■□□ 2.97
Bloc1s4Q8VED2 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
Bloc1s4Q8VED2 Gm23366-201ENSMUST00000175022 89 ntBASIC33.58■■■□□ 2.97
Bloc1s4Q8VED2 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC33.57■■■□□ 2.96
Bloc1s4Q8VED2 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
Bloc1s4Q8VED2 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.96
Bloc1s4Q8VED2 CT025624.2-201ENSMUST00000223609 1909 ntBASIC33.45■■■□□ 2.95
Bloc1s4Q8VED2 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
Bloc1s4Q8VED2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
Bloc1s4Q8VED2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC33.31■■■□□ 2.92
Bloc1s4Q8VED2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
Bloc1s4Q8VED2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
Bloc1s4Q8VED2 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.24■■■□□ 2.91
Bloc1s4Q8VED2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Bloc1s4Q8VED2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Bloc1s4Q8VED2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC33.13■■■□□ 2.89
Bloc1s4Q8VED2 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.09■■■□□ 2.89
Bloc1s4Q8VED2 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC33.01■■■□□ 2.87
Bloc1s4Q8VED2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC33■■■□□ 2.87
Bloc1s4Q8VED2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Bloc1s4Q8VED2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC32.96■■■□□ 2.87
Bloc1s4Q8VED2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
Bloc1s4Q8VED2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC32.87■■■□□ 2.85
Bloc1s4Q8VED2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.84■■■□□ 2.85
Bloc1s4Q8VED2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC32.8■■■□□ 2.84
Bloc1s4Q8VED2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Bloc1s4Q8VED2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32.76■■■□□ 2.83
Bloc1s4Q8VED2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC32.69■■■□□ 2.82
Bloc1s4Q8VED2 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC32.66■■■□□ 2.82
Bloc1s4Q8VED2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Bloc1s4Q8VED2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Bloc1s4Q8VED2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
Bloc1s4Q8VED2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Bloc1s4Q8VED2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC32.42■■■□□ 2.78
Bloc1s4Q8VED2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Bloc1s4Q8VED2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Bloc1s4Q8VED2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
Bloc1s4Q8VED2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Bloc1s4Q8VED2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC32.34■■■□□ 2.77
Bloc1s4Q8VED2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Bloc1s4Q8VED2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Bloc1s4Q8VED2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
Bloc1s4Q8VED2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms