RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Gm35339A0A140LHH9 1649 aa36,64■■■■□ 3,46
Ccdc50-201ENSMUST00000039443 NischQ80TM9 1593 aa36,37■■■■□ 3,41
Ccdc50-201ENSMUST00000039443 Abcc9P70170 1546 aa35,27■■■■□ 3,24
Ccdc50-201ENSMUST00000039443 Abcc8B2RUS7 1588 aa35,01■■■■□ 3,2
Ccdc50-201ENSMUST00000039443 Rtl1Q7M732 1744 aa33,8■■■■□ 3
Ccdc50-201ENSMUST00000039443 ScribQ80U72 1612 aa33,42■■■□□ 2,94
Ccdc50-201ENSMUST00000039443 Rhox8Q6VSS7 320 aa33,25■■■□□ 2,91
Ccdc50-201ENSMUST00000039443 Ccdc180J3QNE4 1664 aa33,16■■■□□ 2,9
Ccdc50-201ENSMUST00000039443 NacadQ5SWP3 1504 aa32,46■■■□□ 2,79
Ccdc50-201ENSMUST00000039443 Kdm5dQ62240 1548 aa32,45■■■□□ 2,79
Ccdc50-201ENSMUST00000039443 Dcaf1Q80TR8 1506 aa32,44■■■□□ 2,78
Ccdc50-201ENSMUST00000039443 Rpgrip1Q9EPQ2 1331 aa32,32■■■□□ 2,76
Ccdc50-201ENSMUST00000039443 Zcchc6Q5BLK4 1491 aaKnown RBP32,14■■■□□ 2,74
Ccdc50-201ENSMUST00000039443 Sycp2Q9CUU3 1500 aa31,79■■■□□ 2,68
Ccdc50-201ENSMUST00000039443 Rb1cc1Q9ESK9 1588 aa31,74■■■□□ 2,67
Ccdc50-201ENSMUST00000039443 HrcG5E8J6 738 aa31,41■■■□□ 2,62
Ccdc50-201ENSMUST00000039443 Acin1Q9JIX8 1338 aaKnown RBP31,37■■■□□ 2,61
Ccdc50-201ENSMUST00000039443 Baz1aO88379 1555 aa31,35■■■□□ 2,61
Ccdc50-201ENSMUST00000039443 BicraF8VPZ9 1578 aa31,25■■■□□ 2,59
Ccdc50-201ENSMUST00000039443 Crybg2B7ZCC2 1516 aa31,2■■■□□ 2,58
Ccdc50-201ENSMUST00000039443 Ccdc136Q3TVA9 1136 aa30,71■■■□□ 2,51
Ccdc50-201ENSMUST00000039443 Ehmt2Q9Z148 1263 aaKnown RBP30,51■■■□□ 2,47
Ccdc50-201ENSMUST00000039443 Smarca2Q6DIC0 1577 aa30,49■■■□□ 2,47
Ccdc50-201ENSMUST00000039443 Trim41Q5NCC3 630 aa30,42■■■□□ 2,46
Ccdc50-201ENSMUST00000039443 Cep164Q5DU05 1446 aa30,32■■■□□ 2,44
Ccdc50-201ENSMUST00000039443 Pds5bQ4VA53 1446 aaKnown RBP30,28■■■□□ 2,44
Ccdc50-201ENSMUST00000039443 Pcgf6Q99NA9 353 aa30,21■■■□□ 2,43
Ccdc50-201ENSMUST00000039443 Cecr2E9Q2Z1 1453 aa30,13■■■□□ 2,41
Ccdc50-201ENSMUST00000039443 Atad2bE9Q166 1460 aaKnown RBP30,11■■■□□ 2,41
Ccdc50-201ENSMUST00000039443 Smarca4Q3TKT4 1613 aaKnown RBP30,07■■■□□ 2,4
Ccdc50-201ENSMUST00000039443 Iqgap2Q3UQ44 1575 aa29,82■■■□□ 2,36
Ccdc50-201ENSMUST00000039443 Thoc2B1AZI6 1594 aaKnown RBP29,81■■■□□ 2,36
Ccdc50-201ENSMUST00000039443 Brd4Q9ESU6 1400 aaKnown RBP29,67■■■□□ 2,34
Ccdc50-201ENSMUST00000039443 Ercc6F8VPZ5 1481 aa29,64■■■□□ 2,34
Ccdc50-201ENSMUST00000039443 CftrP26361 1476 aa29,58■■■□□ 2,33
Ccdc50-201ENSMUST00000039443 Rsf1E9PWW9 1441 aaKnown RBP29,57■■■□□ 2,32
Ccdc50-201ENSMUST00000039443 Synj1Q8CHC4 1574 aa29,56■■■□□ 2,32
Ccdc50-201ENSMUST00000039443 Cttnbp2B9EJA2 1648 aa29,54■■■□□ 2,32
Ccdc50-201ENSMUST00000039443 Supt5hO55201 1082 aaKnown RBP29,51■■■□□ 2,31
Ccdc50-201ENSMUST00000039443 Dnajc5bQ9CQ94 199 aa29,5■■■□□ 2,31
Ccdc50-201ENSMUST00000039443 Wdr62Q3U3T8 1523 aa29,49■■■□□ 2,31
Ccdc50-201ENSMUST00000039443 Frmpd1A2AKB4 1549 aa29,44■■■□□ 2,3
Ccdc50-201ENSMUST00000039443 Golga3P55937 1487 aa29,43■■■□□ 2,3
Ccdc50-201ENSMUST00000039443 Cngb1E1AZ71 1325 aa29,4■■■□□ 2,3
Ccdc50-201ENSMUST00000039443 NefmP08553 848 aa29,4■■■□□ 2,3
Ccdc50-201ENSMUST00000039443 Chic1Q8CBW7 227 aa29,39■■■□□ 2,3
Ccdc50-201ENSMUST00000039443 Cc2d2aQ8CFW7 1633 aa29,34■■■□□ 2,29
Ccdc50-201ENSMUST00000039443 Ccdc88bQ4QRL3 1481 aa29,27■■■□□ 2,28
Ccdc50-201ENSMUST00000039443 Fam135aQ6NS59 1506 aa29,25■■■□□ 2,27
Ccdc50-201ENSMUST00000039443 Gab3Q8BSM5 595 aa29,2■■■□□ 2,27
Ccdc50-201ENSMUST00000039443 Phldb1Q6PDH0 1371 aaKnown RBP29,16■■■□□ 2,26
Ccdc50-201ENSMUST00000039443 Top2bQ64511 1612 aa29,07■■■□□ 2,24
Ccdc50-201ENSMUST00000039443 Unc13aQ4KUS2 1712 aa29,06■■■□□ 2,24
Ccdc50-201ENSMUST00000039443 Esf1Q3V1V3 845 aaKnown RBP29,05■■■□□ 2,24
Ccdc50-201ENSMUST00000039443 Mier1Q5UAK0 511 aa29,05■■■□□ 2,24
Ccdc50-201ENSMUST00000039443 Baz1bQ9Z277 1479 aa28,98■■■□□ 2,23
Ccdc50-201ENSMUST00000039443 Zeb1Q64318 1117 aa28,97■■■□□ 2,23
Ccdc50-201ENSMUST00000039443 Neurod1Q60867 357 aa28,94■■■□□ 2,22
Ccdc50-201ENSMUST00000039443 Ubl4bQ9CQ84 188 aa28,84■■■□□ 2,21
Ccdc50-201ENSMUST00000039443 Las1lA2BE28 776 aaKnown RBP28,78■■■□□ 2,2
Ccdc50-201ENSMUST00000039443 Rapgef2Q8CHG7 1496 aa28,71■■■□□ 2,19
Ccdc50-201ENSMUST00000039443 Sall2Q9QX96 1004 aa28,69■■■□□ 2,18
Ccdc50-201ENSMUST00000039443 Fmn1Q05860 1466 aa28,6■■■□□ 2,17
Ccdc50-201ENSMUST00000039443 Lamc3Q9R0B6 1581 aa28,6■■■□□ 2,17
Ccdc50-201ENSMUST00000039443 Mrc2Q64449 1479 aa28,56■■■□□ 2,16
Ccdc50-201ENSMUST00000039443 Kif15Q6P9L6 1387 aa28,56■■■□□ 2,16
Ccdc50-201ENSMUST00000039443 Top2aQ01320 1528 aaKnown RBP28,55■■■□□ 2,16
Ccdc50-201ENSMUST00000039443 Anks4bQ8K3X6 423 aa28,48■■■□□ 2,15
Ccdc50-201ENSMUST00000039443 TnnQ80Z71 1560 aa28,45■■■□□ 2,15
Ccdc50-201ENSMUST00000039443 Cux2P70298 1426 aa28,42■■■□□ 2,14
Ccdc50-201ENSMUST00000039443 Cep162Q6ZQ06 1403 aa28,41■■■□□ 2,14
Ccdc50-201ENSMUST00000039443 UbtfP25976 765 aaKnown RBP28,41■■■□□ 2,14
Ccdc50-201ENSMUST00000039443 ClspnQ80YR7 1315 aa28,31■■■□□ 2,12
Ccdc50-201ENSMUST00000039443 Wdr66E9Q743 1299 aa28,24■■■□□ 2,11
Ccdc50-201ENSMUST00000039443 Eif4g1Q6NZJ6 1600 aaKnown RBP28,19■■■□□ 2,1
Ccdc50-201ENSMUST00000039443 Aebp2Q9Z248 504 aaKnown RBP28,17■■■□□ 2,1
Ccdc50-201ENSMUST00000039443 Ccdc18Q640L5 1455 aa28,16■■■□□ 2,1
Ccdc50-201ENSMUST00000039443 Npm1Q61937 292 aaKnown RBP28,16■■■□□ 2,1
Ccdc50-201ENSMUST00000039443 Camsap1A2AHC3 1581 aa28,14■■■□□ 2,09
Ccdc50-201ENSMUST00000039443 Cdk11bP24788 784 aaKnown RBP28,13■■■□□ 2,09
Ccdc50-201ENSMUST00000039443 TonslQ6NZL6 1363 aa28,09■■■□□ 2,09
Ccdc50-201ENSMUST00000039443 Kif21aQ9QXL2 1672 aa28,07■■■□□ 2,08
Ccdc50-201ENSMUST00000039443 Myt1lP97500 1187 aa28,07■■■□□ 2,08
Ccdc50-201ENSMUST00000039443 Nop58Q6DFW4 536 aaKnown RBP28,06■■■□□ 2,08
Ccdc50-201ENSMUST00000039443 Clip1Q922J3 1391 aa28,05■■■□□ 2,08
Ccdc50-201ENSMUST00000039443 Ncapd3Q6ZQK0 1506 aa28■■■□□ 2,07
Ccdc50-201ENSMUST00000039443 Npm2Q80W85 207 aa28■■■□□ 2,07
Ccdc50-201ENSMUST00000039443 Il27Q8K3I6 234 aa28■■■□□ 2,07
Ccdc50-201ENSMUST00000039443 1700123L14RikQ3V2K7 440 aa27,99■■■□□ 2,07
Ccdc50-201ENSMUST00000039443 Csrnp3P59055 597 aa27,94■■■□□ 2,06
Ccdc50-201ENSMUST00000039443 LrpprcQ6PB66 1392 aaKnown RBP27,93■■■□□ 2,06
Ccdc50-201ENSMUST00000039443 Lrriq1Q0P5X1 1673 aa27,88■■■□□ 2,05
Ccdc50-201ENSMUST00000039443 Aplp2Q06335 707 aa27,88■■■□□ 2,05
Ccdc50-201ENSMUST00000039443 Dhx29Q6PGC1 1365 aaKnown RBP27,87■■■□□ 2,05
Ccdc50-201ENSMUST00000039443 PogzQ8BZH4 1409 aaKnown RBP27,81■■■□□ 2,04
Ccdc50-201ENSMUST00000039443 Grin2bQ01097 1482 aa27,81■■■□□ 2,04
Ccdc50-201ENSMUST00000039443 Arhgap35Q91YM2 1499 aa27,79■■■□□ 2,04
Ccdc50-201ENSMUST00000039443 Plekhg3Q4VAC9 1341 aa27,78■■■□□ 2,04
Ccdc50-201ENSMUST00000039443 NrkQ9R0G8 1455 aa27,77■■■□□ 2,04
Ccdc50-201ENSMUST00000039443 Crocc2F6XLV1 1638 aa27,75■■■□□ 2,03
Retrieved 100 of 22,080 RNA–protein pairs in 51,7 ms