RNA–Protein interactions for RNA: ENSMUST00000028769.12

Ptpra-201, Transcript of Receptor-type tyrosine-protein phosphatase alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptpra, Length 3,227 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpra-201ENSMUST00000028769 Cgnl1Q6AW69 1298 aa21.9■■□□□ 1.1
Ptpra-201ENSMUST00000028769 Cwc27Q3TKY6 469 aa21.89■■□□□ 1.1
Ptpra-201ENSMUST00000028769 CenppQ9CZ92 286 aa21.89■■□□□ 1.1
Ptpra-201ENSMUST00000028769 Nucb1Q02819 459 aaKnown RBP21.89■■□□□ 1.09
Ptpra-201ENSMUST00000028769 PogkQ80TC5 607 aa21.89■■□□□ 1.09
Ptpra-201ENSMUST00000028769 Rnf214Q8BFU3 668 aaKnown RBP21.88■■□□□ 1.09
Ptpra-201ENSMUST00000028769 Eya1P97767 591 aa21.87■■□□□ 1.09
Ptpra-201ENSMUST00000028769 Ppp1r42Q8R1Z4 357 aa21.87■■□□□ 1.09
Ptpra-201ENSMUST00000028769 Rtn4Q99P72 1162 aaKnown RBP21.87■■□□□ 1.09
Ptpra-201ENSMUST00000028769 Atp7bQ64446 1462 aa21.87■■□□□ 1.09
Ptpra-201ENSMUST00000028769 Gcc1Q9D4H2 778 aa21.87■■□□□ 1.09
Ptpra-201ENSMUST00000028769 Phf14Q9D4H9 881 aa21.87■■□□□ 1.09
Ptpra-201ENSMUST00000028769 Chl1P70232 1209 aa21.86■■□□□ 1.09
Ptpra-201ENSMUST00000028769 Map3k13Q1HKZ5 959 aa21.86■■□□□ 1.09
Ptpra-201ENSMUST00000028769 Taok2Q6ZQ29 1240 aa21.86■■□□□ 1.09
Ptpra-201ENSMUST00000028769 Pdcl3Q8BVF2 240 aa21.86■■□□□ 1.09
Ptpra-201ENSMUST00000028769 EngaseQ8BX80 734 aa21.86■■□□□ 1.09
Ptpra-201ENSMUST00000028769 Prdm2A2A7B5 1709 aaKnown RBP21.86■■□□□ 1.09
Ptpra-201ENSMUST00000028769 1700010I14RikQ7TPG0 532 aa21.85■■□□□ 1.09
Ptpra-201ENSMUST00000028769 Stk3Q9JI10 497 aa21.85■■□□□ 1.09
Ptpra-201ENSMUST00000028769 Ift172Q6VH22 1749 aa21.85■■□□□ 1.09
Ptpra-201ENSMUST00000028769 Dennd6aQ8BH65 605 aa21.85■■□□□ 1.09
Ptpra-201ENSMUST00000028769 Slc4a10Q5DTL9 1118 aa21.85■■□□□ 1.09
Ptpra-201ENSMUST00000028769 NktrP30415 1453 aa21.84■■□□□ 1.09
Ptpra-201ENSMUST00000028769 Gadd45bP22339 160 aa21.84■■□□□ 1.09
Ptpra-201ENSMUST00000028769 Aldh8a1Q8BH00 487 aa21.84■■□□□ 1.09
Ptpra-201ENSMUST00000028769 Sytl4Q9R0Q1 673 aa21.84■■□□□ 1.09
Ptpra-201ENSMUST00000028769 Idi1P58044 227 aa21.84■■□□□ 1.09
Ptpra-201ENSMUST00000028769 Tm6sf1P58749 370 aa21.82■■□□□ 1.08
Ptpra-201ENSMUST00000028769 Rbm27Q5SFM8 1060 aaKnown RBP21.82■■□□□ 1.08
Ptpra-201ENSMUST00000028769 Nphp1Q9QY53 687 aa21.82■■□□□ 1.08
Ptpra-201ENSMUST00000028769 Arhgef28P97433 1693 aa21.81■■□□□ 1.08
Ptpra-201ENSMUST00000028769 Chpf2Q3UU43 768 aa21.81■■□□□ 1.08
Ptpra-201ENSMUST00000028769 Sos1Q62245 1319 aa21.81■■□□□ 1.08
Ptpra-201ENSMUST00000028769 Gnai2P08752 355 aaKnown RBP21.81■■□□□ 1.08
Ptpra-201ENSMUST00000028769 Ptpdc1Q6NZK8 747 aa21.81■■□□□ 1.08
Ptpra-201ENSMUST00000028769 Jakmip1Q8BVL9 626 aa21.81■■□□□ 1.08
Ptpra-201ENSMUST00000028769 Cyp27a1Q9DBG1 533 aa21.81■■□□□ 1.08
Ptpra-201ENSMUST00000028769 Zbtb45Q52KG4 520 aa21.8■■□□□ 1.08
Ptpra-201ENSMUST00000028769 Erc2Q6PH08 957 aa21.8■■□□□ 1.08
Ptpra-201ENSMUST00000028769 Zkscan1Q8BGS3 561 aaKnown RBP21.8■■□□□ 1.08
Ptpra-201ENSMUST00000028769 Kdm4cQ8VCD7 1054 aa21.8■■□□□ 1.08
Ptpra-201ENSMUST00000028769 Zkscan16A2ALW2 728 aa21.8■■□□□ 1.08
Ptpra-201ENSMUST00000028769 Babam1Q3UI43 333 aa21.8■■□□□ 1.08
Ptpra-201ENSMUST00000028769 Cavin2Q63918 418 aaKnown RBP21.79■■□□□ 1.08
Ptpra-201ENSMUST00000028769 RestQ8VIG1 1082 aa21.79■■□□□ 1.08
Ptpra-201ENSMUST00000028769 MyclP10166 368 aa21.78■■□□□ 1.08
Ptpra-201ENSMUST00000028769 Fkbp4P30416 458 aa21.78■■□□□ 1.08
Ptpra-201ENSMUST00000028769 NpatQ8BMA5 1420 aa21.78■■□□□ 1.08
Ptpra-201ENSMUST00000028769 Anapc15-psA0A140T8L6 141 aa21.78■■□□□ 1.08
Ptpra-201ENSMUST00000028769 Slc35g1Q8BY79 368 aa21.78■■□□□ 1.08
Ptpra-201ENSMUST00000028769 Exoc6bA6H5Z3 810 aa21.77■■□□□ 1.08
Ptpra-201ENSMUST00000028769 Syce3B5KM66 88 aa21.77■■□□□ 1.08
Ptpra-201ENSMUST00000028769 F2rP30558 430 aa21.77■■□□□ 1.08
Ptpra-201ENSMUST00000028769 Tmx3Q8BXZ1 456 aa21.77■■□□□ 1.08
Ptpra-201ENSMUST00000028769 Gm10563F6WIE4 79 aa21.77■■□□□ 1.08
Ptpra-201ENSMUST00000028769 Kif13aQ9EQW7 1749 aa21.76■■□□□ 1.07
Ptpra-201ENSMUST00000028769 Ap3b2Q9JME5 1082 aa21.76■■□□□ 1.07
Ptpra-201ENSMUST00000028769 Nlgn1Q99K10 843 aa21.76■■□□□ 1.07
Ptpra-201ENSMUST00000028769 Cul9Q80TT8 1865 aa21.75■■□□□ 1.07
Ptpra-201ENSMUST00000028769 Amotl2Q8K371 772 aa21.75■■□□□ 1.07
Ptpra-201ENSMUST00000028769 Gm9992B2RWK3 458 aa21.75■■□□□ 1.07
Ptpra-201ENSMUST00000028769 Unc93aQ710D3 458 aa21.75■■□□□ 1.07
Ptpra-201ENSMUST00000028769 Jarid2Q62315 1234 aa21.74■■□□□ 1.07
Ptpra-201ENSMUST00000028769 Cyp2d12Q8BVD2 504 aa21.74■■□□□ 1.07
Ptpra-201ENSMUST00000028769 Zdhhc9P59268 364 aa21.74■■□□□ 1.07
Ptpra-201ENSMUST00000028769 Mcm2P97310 904 aa21.74■■□□□ 1.07
Ptpra-201ENSMUST00000028769 NexnQ7TPW1 607 aa21.74■■□□□ 1.07
Ptpra-201ENSMUST00000028769 Plekhg1F6S200 1446 aa21.73■■□□□ 1.07
Ptpra-201ENSMUST00000028769 Tpx2A2APB8 745 aaKnown RBP21.73■■□□□ 1.07
Ptpra-201ENSMUST00000028769 Aldh1l2Q8K009 923 aa21.73■■□□□ 1.07
Ptpra-201ENSMUST00000028769 Chd4Q6PDQ2 1915 aaKnown RBP21.73■■□□□ 1.07
Ptpra-201ENSMUST00000028769 CltcQ68FD5 1675 aaKnown RBP21.73■■□□□ 1.07
Ptpra-201ENSMUST00000028769 Brpf1B2RRD7 1212 aa21.73■■□□□ 1.07
Ptpra-201ENSMUST00000028769 4933402E13RikQ9D4D2 429 aa21.73■■□□□ 1.07
Ptpra-201ENSMUST00000028769 Rsph4aQ8BYM7 716 aa21.72■■□□□ 1.07
Ptpra-201ENSMUST00000028769 Synj2Q9D2G5 1434 aa21.72■■□□□ 1.07
Ptpra-201ENSMUST00000028769 Zkscan2G3X952 960 aa21.72■■□□□ 1.07
Ptpra-201ENSMUST00000028769 Zap70P43404 618 aa21.72■■□□□ 1.07
Ptpra-201ENSMUST00000028769 EvcP57680 1005 aa21.72■■□□□ 1.07
Ptpra-201ENSMUST00000028769 Cfdp1O88271 295 aaKnown RBP21.72■■□□□ 1.07
Ptpra-201ENSMUST00000028769 FancaQ9JL70 1439 aa21.71■■□□□ 1.07
Ptpra-201ENSMUST00000028769 Naa30Q8CES0 364 aa21.7■■□□□ 1.07
Ptpra-201ENSMUST00000028769 Pcmtd1P59913 357 aa21.7■■□□□ 1.06
Ptpra-201ENSMUST00000028769 Gtf2a1Q99PM3 378 aa21.7■■□□□ 1.06
Ptpra-201ENSMUST00000028769 Tlr7P58681 1050 aa21.7■■□□□ 1.06
Ptpra-201ENSMUST00000028769 Filip1lQ6P6L0 1131 aa21.7■■□□□ 1.06
Ptpra-201ENSMUST00000028769 Adamts7Q68SA9 1657 aa21.69■■□□□ 1.06
Ptpra-201ENSMUST00000028769 Tmem94Q7TSH8 1360 aa21.67■■□□□ 1.06
Ptpra-201ENSMUST00000028769 Hoxb7P09024 217 aa21.67■■□□□ 1.06
Ptpra-201ENSMUST00000028769 Pof1bQ8K4L4 587 aa21.67■■□□□ 1.06
Ptpra-201ENSMUST00000028769 PtpruB1AUH1 1446 aa21.67■■□□□ 1.06
Ptpra-201ENSMUST00000028769 Zfp777B9EKF4 885 aa21.67■■□□□ 1.06
Ptpra-201ENSMUST00000028769 Mphosph10Q810V0 681 aaKnown RBP21.67■■□□□ 1.06
Ptpra-201ENSMUST00000028769 Rbm10Q99KG3 930 aaKnown RBP21.67■■□□□ 1.06
Ptpra-201ENSMUST00000028769 Arhgef1Q61210 920 aaKnown RBP21.67■■□□□ 1.06
Ptpra-201ENSMUST00000028769 4931400O07RikQ9D4M5 137 aa21.67■■□□□ 1.06
Ptpra-201ENSMUST00000028769 EappQ5BU09 281 aa21.66■■□□□ 1.06
Ptpra-201ENSMUST00000028769 Pknox2Q8BG99 474 aa21.66■■□□□ 1.06
Ptpra-201ENSMUST00000028769 HypkQ9CR41 129 aa21.66■■□□□ 1.06
Retrieved 100 of 22,080 RNA–protein pairs in 15.1 ms