Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Gm25239-201ENSMUST00000174915 86 ntBASIC47.86■■■■■ 5.25
Rtn4Q99P72 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC44.33■■■■■ 4.69
Rtn4Q99P72 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC43.68■■■■■ 4.58
Rtn4Q99P72 Gm15042-201ENSMUST00000120212 883 ntBASIC41.74■■■■■ 4.27
Rtn4Q99P72 Gm24109-201ENSMUST00000175489 103 ntBASIC41.53■■■■■ 4.24
Rtn4Q99P72 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC40.94■■■■■ 4.14
Rtn4Q99P72 Gm15045-201ENSMUST00000117359 883 ntBASIC40.76■■■■■ 4.12
Rtn4Q99P72 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC40.6■■■■■ 4.09
Rtn4Q99P72 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC40.35■■■■■ 4.05
Rtn4Q99P72 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC40.24■■■■■ 4.03
Rtn4Q99P72 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC40.19■■■■■ 4.03
Rtn4Q99P72 Gm23366-201ENSMUST00000175022 89 ntBASIC39.94■■■■□ 3.98
Rtn4Q99P72 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC39.72■■■■□ 3.95
Rtn4Q99P72 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC39.54■■■■□ 3.92
Rtn4Q99P72 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC38.92■■■■□ 3.82
Rtn4Q99P72 AC153911.1-202ENSMUST00000218534 1034 ntBASIC38.82■■■■□ 3.8
Rtn4Q99P72 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC38.79■■■■□ 3.8
Rtn4Q99P72 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC38.54■■■■□ 3.76
Rtn4Q99P72 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC38.53■■■■□ 3.76
Rtn4Q99P72 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC38.52■■■■□ 3.76
Rtn4Q99P72 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC38.52■■■■□ 3.76
Rtn4Q99P72 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC38.38■■■■□ 3.73
Rtn4Q99P72 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC38.35■■■■□ 3.73
Rtn4Q99P72 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC38.13■■■■□ 3.69
Rtn4Q99P72 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC38.09■■■■□ 3.69
Rtn4Q99P72 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC38.02■■■■□ 3.68
Rtn4Q99P72 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC37.98■■■■□ 3.67
Rtn4Q99P72 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC37.95■■■■□ 3.67
Rtn4Q99P72 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC37.91■■■■□ 3.66
Rtn4Q99P72 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC37.85■■■■□ 3.65
Rtn4Q99P72 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC37.83■■■■□ 3.65
Rtn4Q99P72 Gm25238-201ENSMUST00000174914 89 ntBASIC37.81■■■■□ 3.64
Rtn4Q99P72 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC37.77■■■■□ 3.64
Rtn4Q99P72 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC37.76■■■■□ 3.64
Rtn4Q99P72 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC37.74■■■■□ 3.63
Rtn4Q99P72 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC37.61■■■■□ 3.61
Rtn4Q99P72 Psd-208ENSMUST00000224556 2034 ntBASIC37.59■■■■□ 3.61
Rtn4Q99P72 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC37.42■■■■□ 3.58
Rtn4Q99P72 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC36.98■■■■□ 3.51
Rtn4Q99P72 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC36.96■■■■□ 3.51
Rtn4Q99P72 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC36.92■■■■□ 3.5
Rtn4Q99P72 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC36.89■■■■□ 3.5
Rtn4Q99P72 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC36.82■■■■□ 3.48
Rtn4Q99P72 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC36.8■■■■□ 3.48
Rtn4Q99P72 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC36.76■■■■□ 3.48
Rtn4Q99P72 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC36.61■■■■□ 3.45
Rtn4Q99P72 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC36.6■■■■□ 3.45
Rtn4Q99P72 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC36.54■■■■□ 3.44
Rtn4Q99P72 Gm27325-201ENSMUST00000175467 74 ntBASIC36.53■■■■□ 3.44
Rtn4Q99P72 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC36.46■■■■□ 3.43
Rtn4Q99P72 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC36.41■■■■□ 3.42
Rtn4Q99P72 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC36.39■■■■□ 3.42
Rtn4Q99P72 Gm25262-201ENSMUST00000174934 133 ntBASIC36.25■■■■□ 3.39
Rtn4Q99P72 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC36.22■■■■□ 3.39
Rtn4Q99P72 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC36.16■■■■□ 3.38
Rtn4Q99P72 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC36.16■■■■□ 3.38
Rtn4Q99P72 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC36.14■■■■□ 3.38
Rtn4Q99P72 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC36.07■■■■□ 3.36
Rtn4Q99P72 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC36.05■■■■□ 3.36
Rtn4Q99P72 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC36.02■■■■□ 3.36
Rtn4Q99P72 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC35.99■■■■□ 3.35
Rtn4Q99P72 Rab21-202ENSMUST00000218831 843 ntBASIC35.91■■■■□ 3.34
Rtn4Q99P72 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC35.83■■■■□ 3.33
Rtn4Q99P72 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC35.68■■■■□ 3.3
Rtn4Q99P72 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC35.67■■■■□ 3.3
Rtn4Q99P72 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC35.64■■■■□ 3.3
Rtn4Q99P72 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC35.64■■■■□ 3.3
Rtn4Q99P72 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC35.63■■■■□ 3.29
Rtn4Q99P72 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC35.59■■■■□ 3.29
Rtn4Q99P72 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
Rtn4Q99P72 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC35.53■■■■□ 3.28
Rtn4Q99P72 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC35.5■■■■□ 3.27
Rtn4Q99P72 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
Rtn4Q99P72 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC35.48■■■■□ 3.27
Rtn4Q99P72 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC35.48■■■■□ 3.27
Rtn4Q99P72 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC35.46■■■■□ 3.27
Rtn4Q99P72 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
Rtn4Q99P72 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC35.43■■■■□ 3.26
Rtn4Q99P72 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC35.42■■■■□ 3.26
Rtn4Q99P72 Gm26115-201ENSMUST00000175605 87 ntBASIC35.37■■■■□ 3.25
Rtn4Q99P72 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC35.33■■■■□ 3.25
Rtn4Q99P72 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC35.28■■■■□ 3.24
Rtn4Q99P72 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
Rtn4Q99P72 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.23
Rtn4Q99P72 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
Rtn4Q99P72 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
Rtn4Q99P72 Gm10524-201ENSMUST00000181931 1893 ntBASIC35.24■■■■□ 3.23
Rtn4Q99P72 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC35.24■■■■□ 3.23
Rtn4Q99P72 Gm8109-201ENSMUST00000194076 746 ntBASIC35.23■■■■□ 3.23
Rtn4Q99P72 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC35.21■■■■□ 3.23
Rtn4Q99P72 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC35.18■■■■□ 3.22
Rtn4Q99P72 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
Rtn4Q99P72 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC35.12■■■■□ 3.21
Rtn4Q99P72 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC35.09■■■■□ 3.21
Rtn4Q99P72 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC35.04■■■■□ 3.2
Rtn4Q99P72 CT025624.2-201ENSMUST00000223609 1909 ntBASIC35.02■■■■□ 3.2
Rtn4Q99P72 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC35.01■■■■□ 3.2
Rtn4Q99P72 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC35■■■■□ 3.19
Rtn4Q99P72 Gm42596-201ENSMUST00000196305 1958 ntBASIC34.96■■■■□ 3.19
Rtn4Q99P72 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC34.92■■■■□ 3.18
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms