Protein–RNA interactions for Protein: Q8BYM7

Rsph4a, Radial spoke head protein 4 homolog A, mousemouse

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph4aQ8BYM7 Gm25239-201ENSMUST00000174915 86 ntBASIC58.16■■■■■ 6.9
Rsph4aQ8BYM7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC54■■■■■ 6.24
Rsph4aQ8BYM7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC53.34■■■■■ 6.13
Rsph4aQ8BYM7 Gm24109-201ENSMUST00000175489 103 ntBASIC50.61■■■■■ 5.69
Rsph4aQ8BYM7 Gm15042-201ENSMUST00000120212 883 ntBASIC50.34■■■■■ 5.65
Rsph4aQ8BYM7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC49.23■■■■■ 5.47
Rsph4aQ8BYM7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC49.22■■■■■ 5.47
Rsph4aQ8BYM7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC49.11■■■■■ 5.45
Rsph4aQ8BYM7 Gm15045-201ENSMUST00000117359 883 ntBASIC49.1■■■■■ 5.45
Rsph4aQ8BYM7 Gm23366-201ENSMUST00000175022 89 ntBASIC48.62■■■■■ 5.37
Rsph4aQ8BYM7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC48.34■■■■■ 5.33
Rsph4aQ8BYM7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC47.38■■■■■ 5.18
Rsph4aQ8BYM7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC47.11■■■■■ 5.13
Rsph4aQ8BYM7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC47.01■■■■■ 5.12
Rsph4aQ8BYM7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC46.9■■■■■ 5.1
Rsph4aQ8BYM7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC46.86■■■■■ 5.09
Rsph4aQ8BYM7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC46.73■■■■■ 5.07
Rsph4aQ8BYM7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC46.6■■■■■ 5.05
Rsph4aQ8BYM7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC46.4■■■■■ 5.02
Rsph4aQ8BYM7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC46.3■■■■■ 5
Rsph4aQ8BYM7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC46.28■■■■■ 5
Rsph4aQ8BYM7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC46.26■■■■■ 5
Rsph4aQ8BYM7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC46.2■■■■■ 4.99
Rsph4aQ8BYM7 Gm25238-201ENSMUST00000174914 89 ntBASIC46.07■■■■■ 4.97
Rsph4aQ8BYM7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC45.65■■■■■ 4.9
Rsph4aQ8BYM7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC45.36■■■■■ 4.85
Rsph4aQ8BYM7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC45.28■■■■■ 4.84
Rsph4aQ8BYM7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC45.22■■■■■ 4.83
Rsph4aQ8BYM7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC45.19■■■■■ 4.82
Rsph4aQ8BYM7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC45.12■■■■■ 4.81
Rsph4aQ8BYM7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC45.02■■■■■ 4.8
Rsph4aQ8BYM7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC45.01■■■■■ 4.8
Rsph4aQ8BYM7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC44.81■■■■■ 4.76
Rsph4aQ8BYM7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC44.75■■■■■ 4.75
Rsph4aQ8BYM7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC44.68■■■■■ 4.74
Rsph4aQ8BYM7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC44.66■■■■■ 4.74
Rsph4aQ8BYM7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC44.58■■■■■ 4.73
Rsph4aQ8BYM7 Gm25262-201ENSMUST00000174934 133 ntBASIC44.52■■■■■ 4.72
Rsph4aQ8BYM7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC44.51■■■■■ 4.72
Rsph4aQ8BYM7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC44.48■■■■■ 4.71
Rsph4aQ8BYM7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC44.23■■■■■ 4.67
Rsph4aQ8BYM7 Gm27325-201ENSMUST00000175467 74 ntBASIC44.07■■■■■ 4.65
Rsph4aQ8BYM7 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC44.05■■■■■ 4.64
Rsph4aQ8BYM7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC43.99■■■■■ 4.63
Rsph4aQ8BYM7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC43.71■■■■■ 4.59
Rsph4aQ8BYM7 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC43.69■■■■■ 4.58
Rsph4aQ8BYM7 Rab21-202ENSMUST00000218831 843 ntBASIC43.66■■■■■ 4.58
Rsph4aQ8BYM7 Gm26115-201ENSMUST00000175605 87 ntBASIC43.65■■■■■ 4.58
Rsph4aQ8BYM7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC43.59■■■■■ 4.57
Rsph4aQ8BYM7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC43.49■■■■■ 4.55
Rsph4aQ8BYM7 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC43.48■■■■■ 4.55
Rsph4aQ8BYM7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC43.45■■■■■ 4.55
Rsph4aQ8BYM7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC43.44■■■■■ 4.54
Rsph4aQ8BYM7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC43.4■■■■■ 4.54
Rsph4aQ8BYM7 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC43.38■■■■■ 4.53
Rsph4aQ8BYM7 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC43.37■■■■■ 4.53
Rsph4aQ8BYM7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC43.36■■■■■ 4.53
Rsph4aQ8BYM7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC43.35■■■■■ 4.53
Rsph4aQ8BYM7 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC43.27■■■■■ 4.52
Rsph4aQ8BYM7 Gm8109-201ENSMUST00000194076 746 ntBASIC43.18■■■■■ 4.5
Rsph4aQ8BYM7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC43.08■■■■■ 4.49
Rsph4aQ8BYM7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC43.03■■■■■ 4.48
Rsph4aQ8BYM7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC42.97■■■■■ 4.47
Rsph4aQ8BYM7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC42.85■■■■■ 4.45
Rsph4aQ8BYM7 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC42.81■■■■■ 4.44
Rsph4aQ8BYM7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC42.69■■■■■ 4.43
Rsph4aQ8BYM7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC42.64■■■■■ 4.42
Rsph4aQ8BYM7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC42.61■■■■■ 4.41
Rsph4aQ8BYM7 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC42.6■■■■■ 4.41
Rsph4aQ8BYM7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC42.57■■■■■ 4.41
Rsph4aQ8BYM7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC42.56■■■■■ 4.4
Rsph4aQ8BYM7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC42.56■■■■■ 4.4
Rsph4aQ8BYM7 Psd-208ENSMUST00000224556 2034 ntBASIC42.47■■■■■ 4.39
Rsph4aQ8BYM7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC42.34■■■■■ 4.37
Rsph4aQ8BYM7 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC42.32■■■■■ 4.37
Rsph4aQ8BYM7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC42.3■■■■■ 4.36
Rsph4aQ8BYM7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC42.25■■■■■ 4.35
Rsph4aQ8BYM7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC42.2■■■■■ 4.35
Rsph4aQ8BYM7 Gm17082-201ENSMUST00000166043 1091 ntBASIC42.17■■■■■ 4.34
Rsph4aQ8BYM7 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC42.14■■■■■ 4.34
Rsph4aQ8BYM7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC42.13■■■■■ 4.33
Rsph4aQ8BYM7 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC41.98■■■■■ 4.31
Rsph4aQ8BYM7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC41.94■■■■■ 4.3
Rsph4aQ8BYM7 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC41.93■■■■■ 4.3
Rsph4aQ8BYM7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC41.92■■■■■ 4.3
Rsph4aQ8BYM7 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC41.91■■■■■ 4.3
Rsph4aQ8BYM7 Gm24804-201ENSMUST00000174982 85 ntBASIC41.84■■■■■ 4.29
Rsph4aQ8BYM7 Gm27322-201ENSMUST00000184007 104 ntBASIC41.78■■■■■ 4.28
Rsph4aQ8BYM7 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC41.77■■■■■ 4.28
Rsph4aQ8BYM7 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC41.77■■■■■ 4.28
Rsph4aQ8BYM7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC41.77■■■■■ 4.28
Rsph4aQ8BYM7 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC41.7■■■■■ 4.27
Rsph4aQ8BYM7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC41.69■■■■■ 4.26
Rsph4aQ8BYM7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC41.61■■■■■ 4.25
Rsph4aQ8BYM7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC41.61■■■■■ 4.25
Rsph4aQ8BYM7 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC41.59■■■■■ 4.25
Rsph4aQ8BYM7 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC41.57■■■■■ 4.25
Rsph4aQ8BYM7 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC41.48■■■■■ 4.23
Rsph4aQ8BYM7 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC41.43■■■■■ 4.22
Rsph4aQ8BYM7 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC41.42■■■■■ 4.22
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms