RNA–Protein interactions for RNA: ENSMUST00000028769.12

Ptpra-201, Transcript of Receptor-type tyrosine-protein phosphatase alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptpra, Length 3,227 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpra-201ENSMUST00000028769 NischQ80TM9 1593 aa32.93■■■□□ 2.86
Ptpra-201ENSMUST00000028769 Rhox8Q6VSS7 320 aa32.16■■■□□ 2.74
Ptpra-201ENSMUST00000028769 Abcc9P70170 1546 aa31.7■■■□□ 2.66
Ptpra-201ENSMUST00000028769 Gm35339A0A140LHH9 1649 aa31.33■■■□□ 2.61
Ptpra-201ENSMUST00000028769 Abcc8B2RUS7 1588 aa31.01■■■□□ 2.56
Ptpra-201ENSMUST00000028769 Ehmt2Q9Z148 1263 aaKnown RBP30.01■■■□□ 2.4
Ptpra-201ENSMUST00000028769 Rtl1Q7M732 1744 aa29.96■■■□□ 2.39
Ptpra-201ENSMUST00000028769 Ccdc180J3QNE4 1664 aa29.89■■■□□ 2.37
Ptpra-201ENSMUST00000028769 Ccdc136Q3TVA9 1136 aa29.84■■■□□ 2.37
Ptpra-201ENSMUST00000028769 Zcchc6Q5BLK4 1491 aaKnown RBP29.34■■■□□ 2.29
Ptpra-201ENSMUST00000028769 Rpgrip1Q9EPQ2 1331 aa29.15■■■□□ 2.26
Ptpra-201ENSMUST00000028769 Acin1Q9JIX8 1338 aaKnown RBP29.02■■■□□ 2.24
Ptpra-201ENSMUST00000028769 Trim41Q5NCC3 630 aa28.94■■■□□ 2.22
Ptpra-201ENSMUST00000028769 Rb1cc1Q9ESK9 1588 aa28.88■■■□□ 2.21
Ptpra-201ENSMUST00000028769 HrcG5E8J6 738 aa28.87■■■□□ 2.21
Ptpra-201ENSMUST00000028769 ScribQ80U72 1612 aa28.76■■■□□ 2.2
Ptpra-201ENSMUST00000028769 Dcaf1Q80TR8 1506 aa28.7■■■□□ 2.19
Ptpra-201ENSMUST00000028769 Gab3Q8BSM5 595 aa28.48■■■□□ 2.15
Ptpra-201ENSMUST00000028769 Kdm5dQ62240 1548 aa28.45■■■□□ 2.14
Ptpra-201ENSMUST00000028769 Cngb1E1AZ71 1325 aa28.43■■■□□ 2.14
Ptpra-201ENSMUST00000028769 Baz1aO88379 1555 aa28.36■■■□□ 2.13
Ptpra-201ENSMUST00000028769 Pcgf6Q99NA9 353 aa28.3■■■□□ 2.12
Ptpra-201ENSMUST00000028769 Chic1Q8CBW7 227 aa28.11■■■□□ 2.09
Ptpra-201ENSMUST00000028769 NacadQ5SWP3 1504 aa28.03■■■□□ 2.08
Ptpra-201ENSMUST00000028769 Supt5hO55201 1082 aaKnown RBP27.96■■■□□ 2.07
Ptpra-201ENSMUST00000028769 Zeb1Q64318 1117 aa27.91■■■□□ 2.06
Ptpra-201ENSMUST00000028769 Cep164Q5DU05 1446 aa27.87■■■□□ 2.05
Ptpra-201ENSMUST00000028769 Esf1Q3V1V3 845 aaKnown RBP27.82■■■□□ 2.04
Ptpra-201ENSMUST00000028769 Rsf1E9PWW9 1441 aaKnown RBP27.73■■■□□ 2.03
Ptpra-201ENSMUST00000028769 Smarca2Q6DIC0 1577 aa27.69■■■□□ 2.02
Ptpra-201ENSMUST00000028769 Ccdc88bQ4QRL3 1481 aa27.53■■■□□ 2
Ptpra-201ENSMUST00000028769 Mier1Q5UAK0 511 aa27.52■■■□□ 2
Ptpra-201ENSMUST00000028769 Cecr2E9Q2Z1 1453 aa27.51■■■□□ 2
Ptpra-201ENSMUST00000028769 Sycp2Q9CUU3 1500 aa27.41■■□□□ 1.98
Ptpra-201ENSMUST00000028769 UbtfP25976 765 aaKnown RBP27.39■■□□□ 1.98
Ptpra-201ENSMUST00000028769 Brd4Q9ESU6 1400 aaKnown RBP27.36■■□□□ 1.97
Ptpra-201ENSMUST00000028769 Myt1lP97500 1187 aa27.35■■□□□ 1.97
Ptpra-201ENSMUST00000028769 Crybg2B7ZCC2 1516 aa27.34■■□□□ 1.97
Ptpra-201ENSMUST00000028769 Neurod1Q60867 357 aa27.23■■□□□ 1.95
Ptpra-201ENSMUST00000028769 Ppargc1bQ8VHJ7 1014 aa27.23■■□□□ 1.95
Ptpra-201ENSMUST00000028769 Golga3P55937 1487 aa27.22■■□□□ 1.95
Ptpra-201ENSMUST00000028769 Sall2Q9QX96 1004 aa27.14■■□□□ 1.94
Ptpra-201ENSMUST00000028769 NefmP08553 848 aa27.13■■□□□ 1.93
Ptpra-201ENSMUST00000028769 Synj1Q8CHC4 1574 aa27.12■■□□□ 1.93
Ptpra-201ENSMUST00000028769 Wdr66E9Q743 1299 aa27.1■■□□□ 1.93
Ptpra-201ENSMUST00000028769 Npm2Q80W85 207 aa26.98■■□□□ 1.91
Ptpra-201ENSMUST00000028769 CftrP26361 1476 aa26.9■■□□□ 1.9
Ptpra-201ENSMUST00000028769 Aebp2Q9Z248 504 aaKnown RBP26.83■■□□□ 1.89
Ptpra-201ENSMUST00000028769 BicraF8VPZ9 1578 aa26.82■■□□□ 1.88
Ptpra-201ENSMUST00000028769 Plekhg3Q4VAC9 1341 aa26.79■■□□□ 1.88
Ptpra-201ENSMUST00000028769 Las1lA2BE28 776 aaKnown RBP26.77■■□□□ 1.88
Ptpra-201ENSMUST00000028769 Il27Q8K3I6 234 aa26.66■■□□□ 1.86
Ptpra-201ENSMUST00000028769 Ap3b1Q9Z1T1 1105 aa26.65■■□□□ 1.86
Ptpra-201ENSMUST00000028769 Cc2d2aQ8CFW7 1633 aa26.57■■□□□ 1.84
Ptpra-201ENSMUST00000028769 Rapgef2Q8CHG7 1496 aa26.46■■□□□ 1.83
Ptpra-201ENSMUST00000028769 Top2bQ64511 1612 aa26.45■■□□□ 1.82
Ptpra-201ENSMUST00000028769 Csrnp3P59055 597 aa26.44■■□□□ 1.82
Ptpra-201ENSMUST00000028769 Eid3Q3V124 375 aa26.43■■□□□ 1.82
Ptpra-201ENSMUST00000028769 Cep162Q6ZQ06 1403 aa26.42■■□□□ 1.82
Ptpra-201ENSMUST00000028769 Cttnbp2B9EJA2 1648 aa26.41■■□□□ 1.82
Ptpra-201ENSMUST00000028769 Clip1Q922J3 1391 aa26.41■■□□□ 1.82
Ptpra-201ENSMUST00000028769 TonslQ6NZL6 1363 aa26.37■■□□□ 1.81
Ptpra-201ENSMUST00000028769 Nop58Q6DFW4 536 aaKnown RBP26.36■■□□□ 1.81
Ptpra-201ENSMUST00000028769 Cdk11bP24788 784 aaKnown RBP26.31■■□□□ 1.8
Ptpra-201ENSMUST00000028769 Smarca4Q3TKT4 1613 aaKnown RBP26.31■■□□□ 1.8
Ptpra-201ENSMUST00000028769 Fmn1Q05860 1466 aa26.3■■□□□ 1.8
Ptpra-201ENSMUST00000028769 Gm38655A0A286YDK6 273 aa26.28■■□□□ 1.8
Ptpra-201ENSMUST00000028769 ClspnQ80YR7 1315 aa26.27■■□□□ 1.8
Ptpra-201ENSMUST00000028769 Anks4bQ8K3X6 423 aa26.21■■□□□ 1.79
Ptpra-201ENSMUST00000028769 Mapk8ip2Q9ERE9 830 aa26.2■■□□□ 1.79
Ptpra-201ENSMUST00000028769 1700123L14RikQ3V2K7 440 aa26.18■■□□□ 1.78
Ptpra-201ENSMUST00000028769 Top2aQ01320 1528 aaKnown RBP26.16■■□□□ 1.78
Ptpra-201ENSMUST00000028769 Lmod2Q3UHZ5 550 aa26.03■■□□□ 1.76
Ptpra-201ENSMUST00000028769 Iqgap2Q3UQ44 1575 aa26.03■■□□□ 1.76
Ptpra-201ENSMUST00000028769 Fam50aQ9WV03 339 aaKnown RBP26.01■■□□□ 1.75
Ptpra-201ENSMUST00000028769 PtprkP35822 1457 aa25.94■■□□□ 1.74
Ptpra-201ENSMUST00000028769 Setd5Q5XJV7 1441 aa25.89■■□□□ 1.74
Ptpra-201ENSMUST00000028769 Kif15Q6P9L6 1387 aa25.87■■□□□ 1.73
Ptpra-201ENSMUST00000028769 Eea1Q8BL66 1411 aa25.79■■□□□ 1.72
Ptpra-201ENSMUST00000028769 Arhgap35Q91YM2 1499 aa25.79■■□□□ 1.72
Ptpra-201ENSMUST00000028769 Atad2bE9Q166 1460 aaKnown RBP25.78■■□□□ 1.72
Ptpra-201ENSMUST00000028769 Ncapd3Q6ZQK0 1506 aa25.76■■□□□ 1.71
Ptpra-201ENSMUST00000028769 Arap1Q4LDD4 1452 aa25.74■■□□□ 1.71
Ptpra-201ENSMUST00000028769 BlmO88700 1416 aa25.74■■□□□ 1.71
Ptpra-201ENSMUST00000028769 Ube2uB1AUC4 352 aa25.72■■□□□ 1.71
Ptpra-201ENSMUST00000028769 NclP09405 707 aaKnown RBP25.71■■□□□ 1.71
Ptpra-201ENSMUST00000028769 Pds5bQ4VA53 1446 aaKnown RBP25.6■■□□□ 1.69
Ptpra-201ENSMUST00000028769 Frmpd1A2AKB4 1549 aa25.58■■□□□ 1.69
Ptpra-201ENSMUST00000028769 SafbD3YXK2 937 aaKnown RBP25.58■■□□□ 1.69
Ptpra-201ENSMUST00000028769 Hnrnpul2Q00PI9 745 aaKnown RBP25.56■■□□□ 1.68
Ptpra-201ENSMUST00000028769 Slc24a1Q91WD8 1130 aa25.56■■□□□ 1.68
Ptpra-201ENSMUST00000028769 Npm1Q61937 292 aaKnown RBP25.53■■□□□ 1.68
Ptpra-201ENSMUST00000028769 Eif4g1Q6NZJ6 1600 aaKnown RBP25.51■■□□□ 1.67
Ptpra-201ENSMUST00000028769 AqrQ8CFQ3 1481 aaKnown RBP25.51■■□□□ 1.67
Ptpra-201ENSMUST00000028769 CenpbP27790 599 aa25.51■■□□□ 1.67
Ptpra-201ENSMUST00000028769 Aplp2Q06335 707 aa25.49■■□□□ 1.67
Ptpra-201ENSMUST00000028769 Hspa5P20029 655 aaKnown RBP25.48■■□□□ 1.67
Ptpra-201ENSMUST00000028769 Baz1bQ9Z277 1479 aa25.46■■□□□ 1.67
Ptpra-201ENSMUST00000028769 Ubl4bQ9CQ84 188 aa25.46■■□□□ 1.67
Ptpra-201ENSMUST00000028769 Chic2Q9D9G3 165 aa25.44■■□□□ 1.66
Retrieved 100 of 22,080 RNA–protein pairs in 7.5 ms