Protein–RNA interactions for Protein: Q6AW69

Cgnl1, Cingulin-like protein 1, mousemouse

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cgnl1Q6AW69 Gm25239-201ENSMUST00000174915 86 ntBASIC44,64■■■■■ 4,74
Cgnl1Q6AW69 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC42,54■■■■■ 4,4
Cgnl1Q6AW69 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC41,35■■■■■ 4,21
Cgnl1Q6AW69 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC41,15■■■■■ 4,18
Cgnl1Q6AW69 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40,86■■■■■ 4,13
Cgnl1Q6AW69 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC40,45■■■■■ 4,07
Cgnl1Q6AW69 Gm15042-201ENSMUST00000120212 883 ntBASIC39,84■■■■□ 3,97
Cgnl1Q6AW69 Psd-208ENSMUST00000224556 2034 ntBASIC39,6■■■■□ 3,93
Cgnl1Q6AW69 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC39,51■■■■□ 3,92
Cgnl1Q6AW69 Gm15045-201ENSMUST00000117359 883 ntBASIC39,08■■■■□ 3,85
Cgnl1Q6AW69 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC38,87■■■■□ 3,81
Cgnl1Q6AW69 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC38,72■■■■□ 3,79
Cgnl1Q6AW69 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC38,63■■■■□ 3,77
Cgnl1Q6AW69 Gm24109-201ENSMUST00000175489 103 ntBASIC38,31■■■■□ 3,72
Cgnl1Q6AW69 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC38,31■■■■□ 3,72
Cgnl1Q6AW69 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC38,21■■■■□ 3,71
Cgnl1Q6AW69 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC38,05■■■■□ 3,68
Cgnl1Q6AW69 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC37,94■■■■□ 3,66
Cgnl1Q6AW69 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC37,94■■■■□ 3,66
Cgnl1Q6AW69 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC37,92■■■■□ 3,66
Cgnl1Q6AW69 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC37,77■■■■□ 3,64
Cgnl1Q6AW69 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC37,74■■■■□ 3,63
Cgnl1Q6AW69 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC37,71■■■■□ 3,63
Cgnl1Q6AW69 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC37,62■■■■□ 3,61
Cgnl1Q6AW69 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC37,6■■■■□ 3,61
Cgnl1Q6AW69 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC37,59■■■■□ 3,61
Cgnl1Q6AW69 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC37,55■■■■□ 3,6
Cgnl1Q6AW69 Gm23366-201ENSMUST00000175022 89 ntBASIC37,42■■■■□ 3,58
Cgnl1Q6AW69 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC37,33■■■■□ 3,57
Cgnl1Q6AW69 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC37,33■■■■□ 3,57
Cgnl1Q6AW69 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC37,32■■■■□ 3,57
Cgnl1Q6AW69 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC37,25■■■■□ 3,55
Cgnl1Q6AW69 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC37,19■■■■□ 3,54
Cgnl1Q6AW69 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC37,17■■■■□ 3,54
Cgnl1Q6AW69 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC37,08■■■■□ 3,53
Cgnl1Q6AW69 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC37,01■■■■□ 3,52
Cgnl1Q6AW69 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC36,79■■■■□ 3,48
Cgnl1Q6AW69 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC36,74■■■■□ 3,47
Cgnl1Q6AW69 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC36,74■■■■□ 3,47
Cgnl1Q6AW69 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC36,63■■■■□ 3,45
Cgnl1Q6AW69 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC36,61■■■■□ 3,45
Cgnl1Q6AW69 AC153911.1-202ENSMUST00000218534 1034 ntBASIC36,55■■■■□ 3,44
Cgnl1Q6AW69 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC36,53■■■■□ 3,44
Cgnl1Q6AW69 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC36,43■■■■□ 3,42
Cgnl1Q6AW69 Gm10524-201ENSMUST00000181931 1893 ntBASIC36,36■■■■□ 3,41
Cgnl1Q6AW69 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC36,34■■■■□ 3,41
Cgnl1Q6AW69 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC36,21■■■■□ 3,39
Cgnl1Q6AW69 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC36,2■■■■□ 3,39
Cgnl1Q6AW69 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC36,2■■■■□ 3,39
Cgnl1Q6AW69 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC36,08■■■■□ 3,37
Cgnl1Q6AW69 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC35,89■■■■□ 3,34
Cgnl1Q6AW69 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC35,81■■■■□ 3,32
Cgnl1Q6AW69 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC35,57■■■■□ 3,29
Cgnl1Q6AW69 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC35,55■■■■□ 3,28
Cgnl1Q6AW69 CT025624.2-201ENSMUST00000223609 1909 ntBASIC35,51■■■■□ 3,27
Cgnl1Q6AW69 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC35,49■■■■□ 3,27
Cgnl1Q6AW69 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC35,41■■■■□ 3,26
Cgnl1Q6AW69 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC35,33■■■■□ 3,25
Cgnl1Q6AW69 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC35,33■■■■□ 3,25
Cgnl1Q6AW69 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC35,32■■■■□ 3,24
Cgnl1Q6AW69 Gm42596-201ENSMUST00000196305 1958 ntBASIC35,31■■■■□ 3,24
Cgnl1Q6AW69 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC35,31■■■■□ 3,24
Cgnl1Q6AW69 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC35,25■■■■□ 3,23
Cgnl1Q6AW69 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC35,24■■■■□ 3,23
Cgnl1Q6AW69 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC35,23■■■■□ 3,23
Cgnl1Q6AW69 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC35,09■■■■□ 3,21
Cgnl1Q6AW69 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC35,08■■■■□ 3,21
Cgnl1Q6AW69 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC35,08■■■■□ 3,21
Cgnl1Q6AW69 Gm27325-201ENSMUST00000175467 74 ntBASIC35,07■■■■□ 3,2
Cgnl1Q6AW69 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC34,96■■■■□ 3,19
Cgnl1Q6AW69 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC34,95■■■■□ 3,19
Cgnl1Q6AW69 Gm25238-201ENSMUST00000174914 89 ntBASIC34,95■■■■□ 3,19
Cgnl1Q6AW69 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34,88■■■■□ 3,17
Cgnl1Q6AW69 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34,88■■■■□ 3,17
Cgnl1Q6AW69 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC34,88■■■■□ 3,17
Cgnl1Q6AW69 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC34,86■■■■□ 3,17
Cgnl1Q6AW69 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC34,85■■■■□ 3,17
Cgnl1Q6AW69 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC34,82■■■■□ 3,17
Cgnl1Q6AW69 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC34,8■■■■□ 3,16
Cgnl1Q6AW69 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC34,79■■■■□ 3,16
Cgnl1Q6AW69 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC34,79■■■■□ 3,16
Cgnl1Q6AW69 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC34,74■■■■□ 3,15
Cgnl1Q6AW69 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC34,7■■■■□ 3,15
Cgnl1Q6AW69 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC34,62■■■■□ 3,13
Cgnl1Q6AW69 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC34,61■■■■□ 3,13
Cgnl1Q6AW69 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC34,61■■■■□ 3,13
Cgnl1Q6AW69 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34,59■■■■□ 3,13
Cgnl1Q6AW69 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC34,53■■■■□ 3,12
Cgnl1Q6AW69 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC34,5■■■■□ 3,11
Cgnl1Q6AW69 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC34,5■■■■□ 3,11
Cgnl1Q6AW69 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC34,48■■■■□ 3,11
Cgnl1Q6AW69 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC34,44■■■■□ 3,1
Cgnl1Q6AW69 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC34,4■■■■□ 3,1
Cgnl1Q6AW69 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC34,39■■■■□ 3,1
Cgnl1Q6AW69 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC34,39■■■■□ 3,1
Cgnl1Q6AW69 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC34,37■■■■□ 3,09
Cgnl1Q6AW69 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC34,34■■■■□ 3,09
Cgnl1Q6AW69 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC34,32■■■■□ 3,08
Cgnl1Q6AW69 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC34,26■■■■□ 3,07
Cgnl1Q6AW69 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC34,25■■■■□ 3,07
Retrieved 100 of 76,532 protein–RNA pairs in 11,6 ms