RNA–Protein interactions for RNA: YNL294C

RIM21, Transcript of pH sensor molecule, component of the RIM101 pathway, yeast

Gene RIM21, Length 1,602 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIM21	YNL294C	SEC26	P41810	973 aa	Known RBP	4.99	□□□□□ -1.61
RIM21	YNL294C	STU2	P46675	888 aa		4.99	□□□□□ -1.61
RIM21	YNL294C	NAF1	P53919	492 aa	Known RBP	4.99	□□□□□ -1.61
RIM21	YNL294C	RRP9	Q06506	573 aa	Known RBP	4.99	□□□□□ -1.61
RIM21	YNL294C	UTP4	Q06679	776 aa	Known RBP	4.99	□□□□□ -1.61
RIM21	YNL294C	BUD21	Q08492	214 aa	Predicted RBP	4.99	□□□□□ -1.61
RIM21	YNL294C	MCM16	Q12262	181 aa		4.99	□□□□□ -1.61
RIM21	YNL294C	MHP1	P43638	1398 aa		4.98	□□□□□ -1.61
RIM21	YNL294C	NUP145	P49687	1317 aa		4.98	□□□□□ -1.61
RIM21	YNL294C	KDX1	P36005	433 aa		4.98	□□□□□ -1.61
RIM21	YNL294C	VPS41	P38959	992 aa		4.98	□□□□□ -1.61
RIM21	YNL294C	CEP3	P40969	608 aa		4.98	□□□□□ -1.61
RIM21	YNL294C	TY4A-J	P47023	414 aa		4.98	□□□□□ -1.61
RIM21	YNL294C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
RIM21	YNL294C	INP52	P50942	1183 aa		4.98	□□□□□ -1.61
RIM21	YNL294C	HOS2	P53096	452 aa	Predicted RBP	4.98	□□□□□ -1.61
RIM21	YNL294C	BTN2	P53286	410 aa		4.98	□□□□□ -1.61
RIM21	YNL294C	MEH1	Q02205	184 aa		4.98	□□□□□ -1.61
RIM21	YNL294C	ARO80	Q04052	950 aa		4.98	□□□□□ -1.61
RIM21	YNL294C	UBX2	Q04228	584 aa		4.98	□□□□□ -1.61
RIM21	YNL294C	HEL2	Q05580	639 aa	Known RBP	4.98	□□□□□ -1.61
RIM21	YNL294C	PSK2	Q08217	1101 aa		4.98	□□□□□ -1.61
RIM21	YNL294C	APC2	Q12440	853 aa		4.98	□□□□□ -1.61
RIM21	YNL294C	YEF3	P16521	1044 aa	Known RBP	4.97	□□□□□ -1.61
RIM21	YNL294C	MSH1	P25846	959 aa		4.97	□□□□□ -1.61
RIM21	YNL294C	HEM3	P28789	327 aa		4.97	□□□□□ -1.61
RIM21	YNL294C	MCM2	P29469	868 aa		4.97	□□□□□ -1.61
RIM21	YNL294C	AIM21	P40563	679 aa		4.97	□□□□□ -1.61
RIM21	YNL294C	YRB1	P41920	201 aa	Known RBP	4.97	□□□□□ -1.61
RIM21	YNL294C	IST1	P53843	298 aa	Predicted RBP	4.97	□□□□□ -1.61
RIM21	YNL294C	RIA1	P53893	1110 aa		4.97	□□□□□ -1.61
RIM21	YNL294C	VTC3	Q02725	835 aa		4.97	□□□□□ -1.61
RIM21	YNL294C	GDE1	Q02979	1223 aa		4.97	□□□□□ -1.61
RIM21	YNL294C	YML119W	Q03208	357 aa		4.97	□□□□□ -1.61
RIM21	YNL294C	YDR338C	Q05497	695 aa		4.97	□□□□□ -1.61
RIM21	YNL294C	BRE1	Q07457	700 aa	Known RBP	4.97	□□□□□ -1.61
RIM21	YNL294C	RIX7	Q07844	837 aa	Known RBP	4.97	□□□□□ -1.61
RIM21	YNL294C	SLX4	Q12098	748 aa		4.97	□□□□□ -1.61
RIM21	YNL294C	SEC6	P32844	805 aa		4.97	□□□□□ -1.61
RIM21	YNL294C	EMP47	P43555	445 aa		4.97	□□□□□ -1.61
RIM21	YNL294C	SUM1	P46676	1062 aa		4.97	□□□□□ -1.61
RIM21	YNL294C	ALD2	P47771	506 aa		4.97	□□□□□ -1.61
RIM21	YNL294C	GYP7	P48365	746 aa		4.97	□□□□□ -1.61
RIM21	YNL294C	BNI5	P53890	448 aa	Known RBP	4.97	□□□□□ -1.61
RIM21	YNL294C	SPO19	Q03029	223 aa		4.97	□□□□□ -1.61
RIM21	YNL294C	TDA6	Q06466	467 aa		4.97	□□□□□ -1.61
RIM21	YNL294C	CDC45	Q08032	650 aa		4.97	□□□□□ -1.61
RIM21	YNL294C	BRR1	Q99177	341 aa	Predicted RBP	4.97	□□□□□ -1.61
RIM21	YNL294C	KOG1	P38873	1557 aa		4.96	□□□□□ -1.62
RIM21	YNL294C	ELM1	P32801	640 aa		4.96	□□□□□ -1.62
RIM21	YNL294C	GDT1	P38301	280 aa	Predicted RBP	4.96	□□□□□ -1.62
RIM21	YNL294C	UBX7	P38349	436 aa		4.96	□□□□□ -1.62
RIM21	YNL294C	ERC1	P38767	581 aa		4.96	□□□□□ -1.62
RIM21	YNL294C	ARP5	P53946	755 aa		4.96	□□□□□ -1.62
RIM21	YNL294C	STE20	Q03497	939 aa	Known RBP	4.96	□□□□□ -1.62
RIM21	YNL294C	VMS1	Q04311	632 aa	Known RBP	4.96	□□□□□ -1.62
RIM21	YNL294C	MRD1	Q06106	887 aa	Known RBP	4.96	□□□□□ -1.62
RIM21	YNL294C	SCC2	Q04002	1493 aa		4.96	□□□□□ -1.62
RIM21	YNL294C	RTC1	Q08281	1341 aa		4.95	□□□□□ -1.62
RIM21	YNL294C	GCN2	P15442	1659 aa		4.95	□□□□□ -1.62
RIM21	YNL294C	RPO31	P04051	1460 aa		4.95	□□□□□ -1.62
RIM21	YNL294C	GAL2	P13181	574 aa		4.95	□□□□□ -1.62
RIM21	YNL294C	FAR1	P21268	830 aa		4.95	□□□□□ -1.62
RIM21	YNL294C	MRPS28	P21771	286 aa		4.95	□□□□□ -1.62
RIM21	YNL294C	UBP1	P25037	809 aa		4.95	□□□□□ -1.62
RIM21	YNL294C	DAL1	P32375	460 aa		4.95	□□□□□ -1.62
RIM21	YNL294C	FBP26	P32604	452 aa		4.95	□□□□□ -1.62
RIM21	YNL294C	RRN6	P32786	894 aa		4.95	□□□□□ -1.62
RIM21	YNL294C	RPC37	P36121	282 aa		4.95	□□□□□ -1.62
RIM21	YNL294C	SHC1	P39000	512 aa		4.95	□□□□□ -1.62
RIM21	YNL294C	ZDS1	P50111	915 aa	Known RBP	4.95	□□□□□ -1.62
RIM21	YNL294C	YMR265C	Q03508	461 aa	Known RBP	4.95	□□□□□ -1.62
RIM21	YNL294C	INP2	Q03824	705 aa		4.95	□□□□□ -1.62
RIM21	YNL294C	SAC3	P46674	1301 aa		4.95	□□□□□ -1.62
RIM21	YNL294C	PAN1	P32521	1480 aa		4.94	□□□□□ -1.62
RIM21	YNL294C	STE6	P12866	1290 aa		4.94	□□□□□ -1.62
RIM21	YNL294C	MSM1	P22438	575 aa		4.94	□□□□□ -1.62
RIM21	YNL294C	BUD14	P27637	709 aa		4.94	□□□□□ -1.62
RIM21	YNL294C	YEL1	P34225	687 aa		4.94	□□□□□ -1.62
RIM21	YNL294C	EFM2	P38347	419 aa		4.94	□□□□□ -1.62
RIM21	YNL294C	YIR042C	P40586	236 aa		4.94	□□□□□ -1.62
RIM21	YNL294C	TIM11	P81449	96 aa	Predicted RBP	4.94	□□□□□ -1.62
RIM21	YNL294C	RSC2	Q06488	889 aa		4.94	□□□□□ -1.62
RIM21	YNL294C	RUD3	Q12234	484 aa	Known RBP	4.94	□□□□□ -1.62
RIM21	YNL294C	RVB2	Q12464	471 aa	Known RBP	4.94	□□□□□ -1.62
RIM21	YNL294C	YBL113C	Q7M4S9	792 aa		4.94	□□□□□ -1.62
RIM21	YNL294C	REV3	P14284	1504 aa		4.94	□□□□□ -1.62
RIM21	YNL294C	RPP0	P05317	312 aa	Known RBP	4.94	□□□□□ -1.62
RIM21	YNL294C	CDC31	P06704	161 aa	Known RBP	4.94	□□□□□ -1.62
RIM21	YNL294C	HIR2	P32480	875 aa		4.94	□□□□□ -1.62
RIM21	YNL294C	RRP1	P35178	278 aa	Predicted RBP	4.94	□□□□□ -1.62
RIM21	YNL294C	MIC60	P36112	540 aa		4.94	□□□□□ -1.62
RIM21	YNL294C	PBY1	P38254	753 aa		4.94	□□□□□ -1.62
RIM21	YNL294C	ATG14	P38270	344 aa		4.94	□□□□□ -1.62
RIM21	YNL294C	RFC1	P38630	861 aa	Known RBP	4.94	□□□□□ -1.62
RIM21	YNL294C	YLF2	P38746	405 aa		4.94	□□□□□ -1.62
RIM21	YNL294C	IPL1	P38991	367 aa		4.94	□□□□□ -1.62
RIM21	YNL294C	SPR3	P41901	512 aa		4.94	□□□□□ -1.62
RIM21	YNL294C	SBE2	P42223	864 aa	Known RBP	4.94	□□□□□ -1.62
RIM21	YNL294C	HEH2	Q03281	663 aa		4.94	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms