RNA–Protein interactions for RNA: YLR403W

SFP1, Transcript of Regulates transcription of ribosomal protein and biogenesis genes, yeastyeast

Gene SFP1, Length 2,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFP1YLR403W ABP140Q08641 628 aaKnown RBP9.87□□□□□ -0.83
SFP1YLR403W RAV1P47104 1357 aa9.87□□□□□ -0.83
SFP1YLR403W MPT5P39016 859 aaKnown RBP RIP-Chip data9.87□□□□□ -0.83not detected
SFP1YLR403W DCP2P53550 970 aaKnown RBP9.87□□□□□ -0.83
SFP1YLR403W ESBP6P53918 673 aa9.87□□□□□ -0.83
SFP1YLR403W TAF8Q03750 510 aa9.87□□□□□ -0.83
SFP1YLR403W ARV1Q06541 321 aa9.87□□□□□ -0.83
SFP1YLR403W PLC1P32383 869 aa9.86□□□□□ -0.83
SFP1YLR403W SEC8P32855 1065 aa9.86□□□□□ -0.83
SFP1YLR403W APL2P36000 726 aaPredicted RBP9.86□□□□□ -0.83
SFP1YLR403W RTS1P38903 757 aa9.86□□□□□ -0.83
SFP1YLR403W PMC1P38929 1173 aaPredicted RBP9.86□□□□□ -0.83
SFP1YLR403W YER034WP40022 185 aaKnown RBP9.86□□□□□ -0.83
SFP1YLR403W TMN3P40071 706 aa9.86□□□□□ -0.83
SFP1YLR403W JJJ2P46997 583 aa9.86□□□□□ -0.83
SFP1YLR403W IML2P47031 731 aa9.86□□□□□ -0.83
SFP1YLR403W SRB7P47822 140 aa9.86□□□□□ -0.83
SFP1YLR403W DPL1Q05567 589 aa9.86□□□□□ -0.83
SFP1YLR403W RKM1Q08961 583 aaPredicted RBP9.86□□□□□ -0.83
SFP1YLR403W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.86□□□□□ -0.83not detected
SFP1YLR403W DPS1P04802 557 aaKnown RBP9.86□□□□□ -0.83
SFP1YLR403W CLB4P24871 460 aa9.86□□□□□ -0.83
SFP1YLR403W MEF2P39677 819 aa9.86□□□□□ -0.83
SFP1YLR403W YKU80Q04437 629 aa9.86□□□□□ -0.83
SFP1YLR403W MGR3Q04472 501 aa9.86□□□□□ -0.83
SFP1YLR403W NOP12Q08208 459 aaKnown RBP9.86□□□□□ -0.83
SFP1YLR403W ERP4Q12450 207 aa9.86□□□□□ -0.83
SFP1YLR403W YRF1-4O13559 1382 aa9.85□□□□□ -0.83
SFP1YLR403W YML133CQ03099 1374 aa9.85□□□□□ -0.83
SFP1YLR403W YLL067CQ07888 1374 aa9.85□□□□□ -0.83
SFP1YLR403W YLL066CQ99208 1374 aa9.85□□□□□ -0.83
SFP1YLR403W SSC1P0CS90 654 aaKnown RBP9.85□□□□□ -0.83
SFP1YLR403W TUP1P16649 713 aa9.85□□□□□ -0.83
SFP1YLR403W OCA4P25366 362 aa9.85□□□□□ -0.83
SFP1YLR403W RPC19P28000 142 aaKnown RBP9.85□□□□□ -0.83
SFP1YLR403W SLX8P40072 274 aa9.85□□□□□ -0.83
SFP1YLR403W YTA6P40328 754 aa9.85□□□□□ -0.83
SFP1YLR403W SRP1Q02821 542 aaKnown RBP9.85□□□□□ -0.83
SFP1YLR403W BUD2P33314 1104 aa9.84□□□□□ -0.83
SFP1YLR403W SLA2P33338 968 aa9.84□□□□□ -0.83
SFP1YLR403W BMH2P34730 273 aaKnown RBP9.84□□□□□ -0.83
SFP1YLR403W OCA5P38738 679 aa9.84□□□□□ -0.83
SFP1YLR403W STB1P42845 420 aa9.84□□□□□ -0.83
SFP1YLR403W PEX21P50091 288 aa9.84□□□□□ -0.83
SFP1YLR403W SSL2Q00578 843 aa9.84□□□□□ -0.83
SFP1YLR403W HTZ1Q12692 134 aaKnown RBP9.84□□□□□ -0.83
SFP1YLR403W YBL111CQ3E7Y5 667 aa9.84□□□□□ -0.83
SFP1YLR403W BPT1P14772 1559 aa9.84□□□□□ -0.83
SFP1YLR403W MRPL10P36520 322 aa9.84□□□□□ -0.83
SFP1YLR403W UGA2P38067 497 aa9.84□□□□□ -0.83
SFP1YLR403W RLP7P40693 322 aaKnown RBP9.84□□□□□ -0.83
SFP1YLR403W RIM21P48565 533 aa9.84□□□□□ -0.83
SFP1YLR403W CWH41P53008 833 aa9.84□□□□□ -0.83
SFP1YLR403W YGR266WP53326 701 aa9.84□□□□□ -0.83
SFP1YLR403W ECM11Q04110 302 aa9.84□□□□□ -0.83
SFP1YLR403W TAP42Q04372 366 aa9.84□□□□□ -0.83
SFP1YLR403W RRN11Q04712 507 aa9.84□□□□□ -0.83
SFP1YLR403W ENT2Q05785 613 aa9.84□□□□□ -0.83
SFP1YLR403W SMY1P32364 656 aaKnown RBP9.83□□□□□ -0.84
SFP1YLR403W MAL31P38156 614 aa9.83□□□□□ -0.84
SFP1YLR403W NOC2P39744 710 aaKnown RBP9.83□□□□□ -0.84
SFP1YLR403W BOI2P39969 1040 aa9.83□□□□□ -0.84
SFP1YLR403W HOP2P53187 214 aa9.83□□□□□ -0.84
SFP1YLR403W YDL121CQ07541 149 aa9.83□□□□□ -0.84
SFP1YLR403W NAT1P12945 854 aaKnown RBP9.83□□□□□ -0.84
SFP1YLR403W RPB4P20433 221 aaPredicted RBP9.83□□□□□ -0.84
SFP1YLR403W SUI2P20459 304 aaKnown RBP9.83□□□□□ -0.84
SFP1YLR403W MRPL25P23369 157 aa9.83□□□□□ -0.84
SFP1YLR403W RIB7P33312 244 aa9.83□□□□□ -0.84
SFP1YLR403W REI1P38344 393 aaPredicted RBP9.83□□□□□ -0.84
SFP1YLR403W FYV8P46949 817 aaKnown RBP9.83□□□□□ -0.84
SFP1YLR403W DIP5P53388 608 aa9.83□□□□□ -0.84
SFP1YLR403W SFB2P53953 876 aa9.83□□□□□ -0.84
SFP1YLR403W FAR8Q05040 523 aa9.83□□□□□ -0.84
SFP1YLR403W UBX5Q06682 500 aa9.83□□□□□ -0.84
SFP1YLR403W YOL098CQ12496 1037 aa9.83□□□□□ -0.84
SFP1YLR403W YCF1P39109 1515 aaKnown RBP9.82□□□□□ -0.84
SFP1YLR403W CYB2P00175 591 aa9.82□□□□□ -0.84
SFP1YLR403W MER1P16523 270 aa9.82□□□□□ -0.84
SFP1YLR403W VMA1P17255 1071 aaKnown RBP9.82□□□□□ -0.84
SFP1YLR403W HSP78P33416 811 aa9.82□□□□□ -0.84
SFP1YLR403W TRZ1P36159 838 aaPredicted RBP9.82□□□□□ -0.84
SFP1YLR403W MRPL40P36534 297 aa9.82□□□□□ -0.84
SFP1YLR403W GCN20P43535 752 aaKnown RBP9.82□□□□□ -0.84
SFP1YLR403W SGM1P47166 707 aa9.82□□□□□ -0.84
SFP1YLR403W RBL2P48606 106 aaKnown RBP9.82□□□□□ -0.84
SFP1YLR403W SHE10P53075 577 aa9.82□□□□□ -0.84
SFP1YLR403W MON1P53129 644 aa9.82□□□□□ -0.84
SFP1YLR403W PHM6Q05637 104 aa9.82□□□□□ -0.84
SFP1YLR403W YOR296WQ08748 1289 aa9.82□□□□□ -0.84
SFP1YLR403W YOR352WQ08816 343 aa9.82□□□□□ -0.84
SFP1YLR403W FUS1P11710 512 aa9.81□□□□□ -0.84
SFP1YLR403W PRP16P15938 1071 aaPredicted RBP9.81□□□□□ -0.84
SFP1YLR403W PRP22P24384 1145 aaKnown RBP9.81□□□□□ -0.84
SFP1YLR403W PTR2P32901 601 aa9.81□□□□□ -0.84
SFP1YLR403W MFM1Q02783 413 aa9.81□□□□□ -0.84
SFP1YLR403W CWC15Q03772 175 aaKnown RBP9.81□□□□□ -0.84
SFP1YLR403W SDH5Q08230 162 aa9.81□□□□□ -0.84
SFP1YLR403W LSO2Q3E772 92 aaKnown RBP9.81□□□□□ -0.84
SFP1YLR403W VMA4P22203 233 aaKnown RBP9.81□□□□□ -0.84
Retrieved 100 of 5,963 RNA–protein pairs in 35.6 ms