RNA–Protein interactions for RNA: YHR108W

GGA2, Transcript of Protein that regulates Arf1p, Arf2p to facilitate Golgi trafficking, yeastyeast

Gene GGA2, Length 1,758 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GGA2YHR108W RET1P22276 1149 aaKnown RBP9.31□□□□□ -0.92
GGA2YHR108W MCM4P30665 933 aaKnown RBP9.31□□□□□ -0.92
GGA2YHR108W SRP40P32583 406 aaPredicted RBP9.31□□□□□ -0.92
GGA2YHR108W VID27P40157 782 aa9.31□□□□□ -0.92
GGA2YHR108W CSM2P40465 213 aa9.31□□□□□ -0.92
GGA2YHR108W FYV10P40492 516 aa9.31□□□□□ -0.92
GGA2YHR108W MSN5P52918 1224 aa9.31□□□□□ -0.92
GGA2YHR108W PRP42Q03776 544 aaKnown RBP9.31□□□□□ -0.92
GGA2YHR108W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.31□□□□□ -0.92not detected
GGA2YHR108W CEX1Q12453 761 aa9.31□□□□□ -0.92
GGA2YHR108W ARG82P07250 355 aa9.3□□□□□ -0.92
GGA2YHR108W YKL222CP35995 705 aa9.3□□□□□ -0.92
GGA2YHR108W GSM1P42950 618 aa9.3□□□□□ -0.92
GGA2YHR108W STU2P46675 888 aa9.3□□□□□ -0.92
GGA2YHR108W MYO5Q04439 1219 aaKnown RBP9.3□□□□□ -0.92
GGA2YHR108W FLO1P32768 1537 aa9.3□□□□□ -0.92
GGA2YHR108W VPS1P21576 704 aaKnown RBP9.29□□□□□ -0.92
GGA2YHR108W URA1P28272 314 aaPredicted RBP9.29□□□□□ -0.92
GGA2YHR108W ERT1P38140 529 aa9.29□□□□□ -0.92
GGA2YHR108W PCI8P40512 444 aa9.29□□□□□ -0.92
GGA2YHR108W CUE3P53137 624 aaKnown RBP9.29□□□□□ -0.92
GGA2YHR108W PUS6P53294 404 aa9.29□□□□□ -0.92
GGA2YHR108W NAF1P53919 492 aaKnown RBP9.29□□□□□ -0.92
GGA2YHR108W VPS8P39702 1274 aa9.29□□□□□ -0.92
GGA2YHR108W SET4P42948 560 aa9.29□□□□□ -0.92
GGA2YHR108W RPT6Q01939 405 aaKnown RBP9.29□□□□□ -0.92
GGA2YHR108W WAR1Q03631 944 aa9.29□□□□□ -0.92
GGA2YHR108W YDR341CQ05506 607 aaKnown RBP9.29□□□□□ -0.92
GGA2YHR108W MCM3P24279 971 aaKnown RBP9.28□□□□□ -0.92
GGA2YHR108W BMH1P29311 267 aaKnown RBP9.28□□□□□ -0.92
GGA2YHR108W SAC6P32599 642 aaKnown RBP9.28□□□□□ -0.92
GGA2YHR108W MFT1P33441 392 aaKnown RBP9.28□□□□□ -0.92
GGA2YHR108W TCB2P48231 1178 aa9.28□□□□□ -0.92
GGA2YHR108W KEL3Q08979 651 aaPredicted RBP9.28□□□□□ -0.92
GGA2YHR108W MET6P05694 767 aaKnown RBP9.27□□□□□ -0.92
GGA2YHR108W RTC4P53850 401 aa9.27□□□□□ -0.92
GGA2YHR108W EIS1Q05050 843 aaKnown RBP9.27□□□□□ -0.92
GGA2YHR108W ACK1Q07622 623 aaPredicted RBP9.27□□□□□ -0.92
GGA2YHR108W CIT1P00890 479 aa9.27□□□□□ -0.93
GGA2YHR108W PRO3P32263 286 aaKnown RBP9.27□□□□□ -0.93
GGA2YHR108W HCR1Q05775 265 aaKnown RBP9.27□□□□□ -0.93
GGA2YHR108W MMR1Q06324 491 aa9.27□□□□□ -0.93
GGA2YHR108W YOR296WQ08748 1289 aa9.27□□□□□ -0.93
GGA2YHR108W TIP41Q12199 356 aa9.27□□□□□ -0.93
GGA2YHR108W CLF1Q12309 687 aaPredicted RBP9.27□□□□□ -0.93
GGA2YHR108W NOP58Q12499 511 aaKnown RBP9.27□□□□□ -0.93
GGA2YHR108W RPL8BP29453 256 aaKnown RBP9.26□□□□□ -0.93
GGA2YHR108W NSG2P53898 299 aa9.26□□□□□ -0.93
GGA2YHR108W PTC5Q12511 572 aa9.26□□□□□ -0.93
GGA2YHR108W SPC110P32380 944 aa9.25□□□□□ -0.93
GGA2YHR108W TPM2P40414 161 aa9.25□□□□□ -0.93
GGA2YHR108W YGL138CP53122 345 aa9.25□□□□□ -0.93
GGA2YHR108W CTT1P06115 562 aa9.24□□□□□ -0.93
GGA2YHR108W ALG1P16661 449 aa9.24□□□□□ -0.93
GGA2YHR108W YKU70P32807 602 aa9.24□□□□□ -0.93
GGA2YHR108W MNR2P35724 969 aa9.24□□□□□ -0.93
GGA2YHR108W ADE17P38009 592 aaKnown RBP9.24□□□□□ -0.93
GGA2YHR108W TOM71P38825 639 aaKnown RBP9.24□□□□□ -0.93
GGA2YHR108W GIS4Q04233 774 aa9.24□□□□□ -0.93
GGA2YHR108W GFD1Q04839 188 aaKnown RBP9.24□□□□□ -0.93
GGA2YHR108W GAS5Q08193 484 aa9.24□□□□□ -0.93
GGA2YHR108W RRG1Q12167 365 aaPredicted RBP9.24□□□□□ -0.93
GGA2YHR108W TFC8Q12308 588 aa9.24□□□□□ -0.93
GGA2YHR108W HIS4P00815 799 aaKnown RBP9.24□□□□□ -0.93
GGA2YHR108W RPS7AP26786 190 aaKnown RBP9.24□□□□□ -0.93
GGA2YHR108W PSY4P38193 441 aa9.24□□□□□ -0.93
GGA2YHR108W CDC15P27636 974 aa9.23□□□□□ -0.93
GGA2YHR108W PES4P39684 611 aa9.23□□□□□ -0.93
GGA2YHR108W STI1P15705 589 aaKnown RBP RIP-Chip data9.22□□□□□ -0.93not detected
GGA2YHR108W THR4P16120 514 aaKnown RBP9.22□□□□□ -0.93
GGA2YHR108W MAK11P20484 414 aaKnown RBP9.22□□□□□ -0.93
GGA2YHR108W ICL1P28240 557 aaPredicted RBP9.22□□□□□ -0.93
GGA2YHR108W FOL1P53848 824 aa9.22□□□□□ -0.93
GGA2YHR108W VPS75P53853 264 aa9.22□□□□□ -0.93
GGA2YHR108W HOS3Q02959 697 aaKnown RBP9.22□□□□□ -0.93
GGA2YHR108W DPL1Q05567 589 aa9.22□□□□□ -0.93
GGA2YHR108W DSE3Q08729 430 aa9.22□□□□□ -0.93
GGA2YHR108W PCL8Q08966 492 aa9.22□□□□□ -0.93
GGA2YHR108W PRE8P23639 250 aa9.22□□□□□ -0.93
GGA2YHR108W SAS3P34218 831 aa9.22□□□□□ -0.93
GGA2YHR108W SAP190P36123 1033 aa9.22□□□□□ -0.93
GGA2YHR108W MGA2P40578 1113 aa9.22□□□□□ -0.93
GGA2YHR108W EAF6P47128 113 aa9.22□□□□□ -0.93
GGA2YHR108W VPS30Q02948 557 aa9.22□□□□□ -0.93
GGA2YHR108W PSR2Q07949 397 aa9.22□□□□□ -0.93
GGA2YHR108W TMA16Q08687 178 aa9.22□□□□□ -0.93
GGA2YHR108W AFT2Q08957 416 aa9.22□□□□□ -0.93
GGA2YHR108W ACE2P21192 770 aa9.21□□□□□ -0.94
GGA2YHR108W SRM1P21827 482 aa9.21□□□□□ -0.94
GGA2YHR108W CCT3P39077 534 aaKnown RBP9.21□□□□□ -0.94
GGA2YHR108W DAK2P43550 591 aa9.21□□□□□ -0.94
GGA2YHR108W MDM1Q01846 1127 aa9.21□□□□□ -0.94
GGA2YHR108W SMD2Q06217 110 aaKnown RBP9.21□□□□□ -0.94
GGA2YHR108W JSN1P47135 1091 aaKnown RBP RIP-Chip data9.2□□□□□ -0.94not detected
GGA2YHR108W YCG1Q06680 1035 aa9.2□□□□□ -0.94
GGA2YHR108W NUC1P08466 329 aa9.19□□□□□ -0.94
GGA2YHR108W HIR1P32479 840 aa9.19□□□□□ -0.94
GGA2YHR108W AFG2P32794 780 aa9.19□□□□□ -0.94
GGA2YHR108W STT3P39007 718 aaKnown RBP9.19□□□□□ -0.94
GGA2YHR108W YER156CP40093 338 aaKnown RBP9.19□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 12 ms