RNA–Protein interactions for RNA: YER146W

LSM5, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM5, Length 282 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM5	YER146W	EPL1	P43572	832 aa		10.19	□□□□□ -0.78
LSM5	YER146W	VPS4	P52917	437 aa		10.19	□□□□□ -0.78
LSM5	YER146W	CLF1	Q12309	687 aa	Predicted RBP	10.19	□□□□□ -0.78
LSM5	YER146W	GSC2	P40989	1895 aa		10.19	□□□□□ -0.78
LSM5	YER146W	DIT2	P21595	489 aa		10.18	□□□□□ -0.78
LSM5	YER146W	RAD53	P22216	821 aa		10.18	□□□□□ -0.78
LSM5	YER146W	RDS1	P25611	832 aa		10.18	□□□□□ -0.78
LSM5	YER146W	RFC5	P38251	354 aa		10.18	□□□□□ -0.78
LSM5	YER146W	CSM2	P40465	213 aa		10.18	□□□□□ -0.78
LSM5	YER146W	FET4	P40988	552 aa		10.18	□□□□□ -0.78
LSM5	YER146W	YOR111W	Q99210	232 aa		10.18	□□□□□ -0.78
LSM5	YER146W	ADP1	P25371	1049 aa		10.17	□□□□□ -0.78
LSM5	YER146W	RFT1	P38206	574 aa	Predicted RBP	10.17	□□□□□ -0.78
LSM5	YER146W	SLI15	P38283	698 aa		10.17	□□□□□ -0.78
LSM5	YER146W	RPN10	P38886	268 aa	Known RBP	10.17	□□□□□ -0.78
LSM5	YER146W	VPS8	P39702	1274 aa		10.17	□□□□□ -0.78
LSM5	YER146W	SNU71	P53207	620 aa	Known RBP	10.17	□□□□□ -0.78
LSM5	YER146W	SRP54	P20424	541 aa	Known RBP	10.16	□□□□□ -0.78
LSM5	YER146W	MNN4	P36044	1178 aa		10.16	□□□□□ -0.78
LSM5	YER146W	RXT2	P38255	430 aa		10.16	□□□□□ -0.78
LSM5	YER146W	EMP47	P43555	445 aa		10.16	□□□□□ -0.78
LSM5	YER146W	ENT3	P47160	408 aa		10.16	□□□□□ -0.78
LSM5	YER146W	GDE1	Q02979	1223 aa		10.16	□□□□□ -0.78
LSM5	YER146W	DCS2	Q12123	353 aa		10.16	□□□□□ -0.78
LSM5	YER146W	DDP1	Q99321	188 aa	Known RBP	10.16	□□□□□ -0.78
LSM5	YER146W	CDC6	P09119	513 aa		10.15	□□□□□ -0.78
LSM5	YER146W	HPR1	P17629	752 aa	Known RBP	10.15	□□□□□ -0.78
LSM5	YER146W	CHS3	P29465	1165 aa		10.15	□□□□□ -0.78
LSM5	YER146W	AVT3	P36062	692 aa		10.15	□□□□□ -0.78
LSM5	YER146W	TOM71	P38825	639 aa	Known RBP	10.15	□□□□□ -0.78
LSM5	YER146W	KEL1	P38853	1164 aa	Known RBP	10.15	□□□□□ -0.78
LSM5	YER146W	CCT5	P40413	562 aa	Known RBP	10.15	□□□□□ -0.78
LSM5	YER146W	RSM25	P40496	264 aa		10.15	□□□□□ -0.78
LSM5	YER146W	PCI8	P40512	444 aa		10.15	□□□□□ -0.78
LSM5	YER146W	SEN54	Q02825	467 aa	Predicted RBP	10.15	□□□□□ -0.78
LSM5	YER146W	YDL124W	Q07551	312 aa	Known RBP	10.15	□□□□□ -0.78
LSM5	YER146W	DSE3	Q08729	430 aa		10.15	□□□□□ -0.78
LSM5	YER146W	PMA1	P05030	918 aa	Known RBP	10.14	□□□□□ -0.79
LSM5	YER146W	NUC1	P08466	329 aa		10.14	□□□□□ -0.79
LSM5	YER146W	FRS2	P15625	503 aa	Known RBP	10.14	□□□□□ -0.79
LSM5	YER146W	SPB4	P25808	606 aa	Predicted RBP	10.14	□□□□□ -0.79
LSM5	YER146W	RPL8B	P29453	256 aa	Known RBP	10.14	□□□□□ -0.79
LSM5	YER146W	KNS1	P32350	737 aa	Predicted RBP	10.14	□□□□□ -0.79
LSM5	YER146W	RPN12	P32496	274 aa		10.14	□□□□□ -0.79
LSM5	YER146W	CST26	P38226	397 aa		10.14	□□□□□ -0.79
LSM5	YER146W	NIT1	P40447	199 aa		10.14	□□□□□ -0.79
LSM5	YER146W	FOL1	P53848	824 aa		10.14	□□□□□ -0.79
LSM5	YER146W	ETT1	Q08421	412 aa	Known RBP	10.14	□□□□□ -0.79
LSM5	YER146W	YBL028C	P38202	106 aa		10.13	□□□□□ -0.79
LSM5	YER146W	RVS167	P39743	482 aa	Known RBP	10.13	□□□□□ -0.79
LSM5	YER146W	YGL138C	P53122	345 aa		10.13	□□□□□ -0.79
LSM5	YER146W	YGL081W	P53156	320 aa		10.13	□□□□□ -0.79
LSM5	YER146W	MDM1	Q01846	1127 aa		10.13	□□□□□ -0.79
LSM5	YER146W	CEX1	Q12453	761 aa		10.13	□□□□□ -0.79
LSM5	YER146W	HSP82	P02829	709 aa	Known RBP	10.12	□□□□□ -0.79
LSM5	YER146W	CBP1	P07252	654 aa		10.12	□□□□□ -0.79
LSM5	YER146W	HCA4	P20448	770 aa	Known RBP	10.12	□□□□□ -0.79
LSM5	YER146W	MCM3	P24279	971 aa	Known RBP	10.12	□□□□□ -0.79
LSM5	YER146W	TIF4631	P39935	952 aa	Known RBP	10.12	□□□□□ -0.79
LSM5	YER146W	PIL1	P53252	339 aa	Known RBP	10.12	□□□□□ -0.79
LSM5	YER146W	VPS30	Q02948	557 aa		10.12	□□□□□ -0.79
LSM5	YER146W	YDR341C	Q05506	607 aa	Known RBP	10.12	□□□□□ -0.79
LSM5	YER146W	GET3	Q12154	354 aa	Known RBP	10.12	□□□□□ -0.79
LSM5	YER146W	APC11	Q12157	165 aa		10.12	□□□□□ -0.79
LSM5	YER146W	CSR2	Q12734	1121 aa		10.12	□□□□□ -0.79
LSM5	YER146W	THS1	P04801	734 aa	Known RBP	10.11	□□□□□ -0.79
LSM5	YER146W	MET6	P05694	767 aa	Known RBP	10.11	□□□□□ -0.79
LSM5	YER146W	RPL22A	P05749	121 aa	Known RBP	10.11	□□□□□ -0.79
LSM5	YER146W	VPS1	P21576	704 aa	Known RBP	10.11	□□□□□ -0.79
LSM5	YER146W	TUB2	P02557	457 aa	Known RBP	10.1	□□□□□ -0.79
LSM5	YER146W	CCT3	P39077	534 aa	Known RBP	10.1	□□□□□ -0.79
LSM5	YER146W	NAF1	P53919	492 aa	Known RBP	10.1	□□□□□ -0.79
LSM5	YER146W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	10.1	□□□□□ -0.79	not detected
LSM5	YER146W	ACE2	P21192	770 aa		10.09	□□□□□ -0.79
LSM5	YER146W	CUE3	P53137	624 aa	Known RBP	10.09	□□□□□ -0.79
LSM5	YER146W	RET3	P53600	189 aa		10.09	□□□□□ -0.79
LSM5	YER146W	PUS5	Q06244	254 aa		10.09	□□□□□ -0.79
LSM5	YER146W	GAL2	P13181	574 aa		10.08	□□□□□ -0.8
LSM5	YER146W	SEC20	P28791	383 aa		10.08	□□□□□ -0.8
LSM5	YER146W	RKM3	P38222	552 aa		10.08	□□□□□ -0.8
LSM5	YER146W	UBP9	P39967	754 aa		10.08	□□□□□ -0.8
LSM5	YER146W	PEA2	P40091	420 aa		10.08	□□□□□ -0.8
LSM5	YER146W	YPT11	P48559	417 aa		10.08	□□□□□ -0.8
LSM5	YER146W	LAP2	Q10740	671 aa		10.08	□□□□□ -0.8
LSM5	YER146W	CIT1	P00890	479 aa		10.07	□□□□□ -0.8
LSM5	YER146W	URA1	P28272	314 aa	Predicted RBP	10.07	□□□□□ -0.8
LSM5	YER146W	TPS3	P38426	1054 aa	Known RBP	10.07	□□□□□ -0.8
LSM5	YER146W	SOL4	P53315	255 aa		10.07	□□□□□ -0.8
LSM5	YER146W	PTC5	Q12511	572 aa		10.07	□□□□□ -0.8
LSM5	YER146W	HXK1	P04806	485 aa	Known RBP	10.06	□□□□□ -0.8
LSM5	YER146W	STI1	P15705	589 aa	Known RBP RIP-Chip data	10.06	□□□□□ -0.8	not detected
LSM5	YER146W	ALG1	P16661	449 aa		10.06	□□□□□ -0.8
LSM5	YER146W	SAM2	P19358	384 aa	Known RBP	10.06	□□□□□ -0.8
LSM5	YER146W	MAK11	P20484	414 aa	Known RBP	10.06	□□□□□ -0.8
LSM5	YER146W	NPR3	P38742	1146 aa		10.06	□□□□□ -0.8
LSM5	YER146W	VPS45	P38932	577 aa		10.06	□□□□□ -0.8
LSM5	YER146W	AIM7	Q12156	149 aa		10.06	□□□□□ -0.8
LSM5	YER146W	TIP41	Q12199	356 aa		10.06	□□□□□ -0.8
LSM5	YER146W	MYO1	P08964	1928 aa		10.05	□□□□□ -0.8
LSM5	YER146W	ERG12	P07277	443 aa		10.05	□□□□□ -0.8

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms