RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C ELM1P32801 640 aa6.64□□□□□ -1.35
SEC20YDR498C MYO3P36006 1272 aa6.64□□□□□ -1.35
SEC20YDR498C DID4P36108 232 aa6.64□□□□□ -1.35
SEC20YDR498C MAL33P38157 468 aa6.64□□□□□ -1.35
SEC20YDR498C CRG1P38892 291 aaRIP-Chip data6.64□□□□□ -1.35not detected
SEC20YDR498C AKR1P39010 764 aa6.64□□□□□ -1.35
SEC20YDR498C IOC3P43596 787 aa6.64□□□□□ -1.35
SEC20YDR498C SPN1Q06505 410 aaPredicted RBP6.64□□□□□ -1.35
SEC20YDR498C WRS1Q12109 432 aaKnown RBP6.64□□□□□ -1.35
SEC20YDR498C AIM44Q99299 758 aa6.64□□□□□ -1.35
SEC20YDR498C PRO3P32263 286 aaKnown RBP6.63□□□□□ -1.35
SEC20YDR498C YHL017WP38745 532 aa6.63□□□□□ -1.35
SEC20YDR498C CSM2P40465 213 aa6.63□□□□□ -1.35
SEC20YDR498C RSC1P53236 928 aa6.63□□□□□ -1.35
SEC20YDR498C RPS15Q01855 142 aaKnown RBP6.63□□□□□ -1.35
SEC20YDR498C YDR344CQ05510 147 aa6.63□□□□□ -1.35
SEC20YDR498C TFC6Q06339 672 aa6.63□□□□□ -1.35
SEC20YDR498C MPC54Q08550 464 aa6.63□□□□□ -1.35
SEC20YDR498C SSF2Q12153 453 aaPredicted RBP6.63□□□□□ -1.35
SEC20YDR498C CDC6P09119 513 aa6.62□□□□□ -1.35
SEC20YDR498C VPS1P21576 704 aaKnown RBP6.62□□□□□ -1.35
SEC20YDR498C NPL4P33755 580 aa6.62□□□□□ -1.35
SEC20YDR498C BOI1P38041 980 aaKnown RBP6.62□□□□□ -1.35
SEC20YDR498C YKE2P52553 114 aa6.62□□□□□ -1.35
SEC20YDR498C MSN5P52918 1224 aa6.62□□□□□ -1.35
SEC20YDR498C ARP5P53946 755 aa6.62□□□□□ -1.35
SEC20YDR498C UFD2P54860 961 aa6.62□□□□□ -1.35
SEC20YDR498C ELP4Q02884 456 aaKnown RBP6.62□□□□□ -1.35
SEC20YDR498C CDC73Q06697 393 aa6.62□□□□□ -1.35
SEC20YDR498C ARG82P07250 355 aa6.61□□□□□ -1.35
SEC20YDR498C SWI4P25302 1093 aaKnown RBP6.61□□□□□ -1.35
SEC20YDR498C UGA2P38067 497 aa6.61□□□□□ -1.35
SEC20YDR498C RFC5P38251 354 aa6.61□□□□□ -1.35
SEC20YDR498C CCT5P40413 562 aaKnown RBP6.61□□□□□ -1.35
SEC20YDR498C GSM1P42950 618 aa6.61□□□□□ -1.35
SEC20YDR498C ESF1Q06344 628 aaKnown RBP6.61□□□□□ -1.35
SEC20YDR498C DCS2Q12123 353 aa6.61□□□□□ -1.35
SEC20YDR498C TPM1P17536 199 aaKnown RBP6.6□□□□□ -1.35
SEC20YDR498C MCM4P30665 933 aaKnown RBP6.6□□□□□ -1.35
SEC20YDR498C ANP1P32629 500 aa6.6□□□□□ -1.35
SEC20YDR498C MDL2P33311 773 aa6.6□□□□□ -1.35
SEC20YDR498C TTI1P36097 1038 aa6.6□□□□□ -1.35
SEC20YDR498C GEF1P37020 779 aa6.6□□□□□ -1.35
SEC20YDR498C NPR3P38742 1146 aa6.6□□□□□ -1.35
SEC20YDR498C RPN10P38886 268 aaKnown RBP6.6□□□□□ -1.35
SEC20YDR498C DPL1Q05567 589 aa6.6□□□□□ -1.35
SEC20YDR498C EST2Q06163 884 aa6.6□□□□□ -1.35
SEC20YDR498C PSK2Q08217 1101 aa6.6□□□□□ -1.35
SEC20YDR498C DDP1Q99321 188 aaKnown RBP6.6□□□□□ -1.35
SEC20YDR498C GPA1P08539 472 aa6.59□□□□□ -1.35
SEC20YDR498C RPP1BP10622 106 aaKnown RBP6.59□□□□□ -1.35
SEC20YDR498C ICL1P28240 557 aaPredicted RBP6.59□□□□□ -1.35
SEC20YDR498C SRP40P32583 406 aaPredicted RBP6.59□□□□□ -1.35
SEC20YDR498C DSF2P38213 736 aa6.59□□□□□ -1.35
SEC20YDR498C PRE3P38624 215 aa6.59□□□□□ -1.35
SEC20YDR498C RTS1P38903 757 aa6.59□□□□□ -1.35
SEC20YDR498C FYV10P40492 516 aa6.59□□□□□ -1.35
SEC20YDR498C ARH1P48360 493 aa6.59□□□□□ -1.35
SEC20YDR498C MYO5Q04439 1219 aaKnown RBP6.59□□□□□ -1.35
SEC20YDR498C MAM3Q12296 706 aa6.59□□□□□ -1.35
SEC20YDR498C YOR111WQ99210 232 aa6.59□□□□□ -1.35
SEC20YDR498C TRS33Q99394 268 aa6.59□□□□□ -1.35
SEC20YDR498C PFK2P16862 959 aaKnown RBP RIP-Chip data6.58□□□□□ -1.36not detected
SEC20YDR498C HCA4P20448 770 aaKnown RBP6.58□□□□□ -1.36
SEC20YDR498C CBP3P21560 335 aa6.58□□□□□ -1.36
SEC20YDR498C DIT2P21595 489 aa6.58□□□□□ -1.36
SEC20YDR498C CHL1P22516 861 aaPredicted RBP6.58□□□□□ -1.36
SEC20YDR498C RPS7AP26786 190 aaKnown RBP6.58□□□□□ -1.36
SEC20YDR498C URA1P28272 314 aaPredicted RBP6.58□□□□□ -1.36
SEC20YDR498C MCM2P29469 868 aa6.58□□□□□ -1.36
SEC20YDR498C YKL222CP35995 705 aa6.58□□□□□ -1.36
SEC20YDR498C JJJ2P46997 583 aa6.58□□□□□ -1.36
SEC20YDR498C NMA111P53920 997 aa6.58□□□□□ -1.36
SEC20YDR498C PRP42Q03776 544 aaKnown RBP6.58□□□□□ -1.36
SEC20YDR498C UBX2Q04228 584 aa6.58□□□□□ -1.36
SEC20YDR498C LCD1Q04377 747 aa6.58□□□□□ -1.36
SEC20YDR498C COG8Q04632 607 aa6.58□□□□□ -1.36
SEC20YDR498C ATE1P16639 503 aa6.57□□□□□ -1.36
SEC20YDR498C SRP54P20424 541 aaKnown RBP6.57□□□□□ -1.36
SEC20YDR498C MAK31P23059 88 aa6.57□□□□□ -1.36
SEC20YDR498C RIT1P23796 513 aa6.57□□□□□ -1.36
SEC20YDR498C RFT1P38206 574 aaPredicted RBP6.57□□□□□ -1.36
SEC20YDR498C UTP7P40055 554 aaKnown RBP6.57□□□□□ -1.36
SEC20YDR498C VID27P40157 782 aa6.57□□□□□ -1.36
SEC20YDR498C PCI8P40512 444 aa6.57□□□□□ -1.36
SEC20YDR498C BUD6P41697 788 aa6.57□□□□□ -1.36
SEC20YDR498C ENP2P48234 707 aaKnown RBP6.57□□□□□ -1.36
SEC20YDR498C YPT11P48559 417 aa6.57□□□□□ -1.36
SEC20YDR498C PEX14P53112 341 aa6.57□□□□□ -1.36
SEC20YDR498C PIL1P53252 339 aaKnown RBP6.57□□□□□ -1.36
SEC20YDR498C GRX6Q12438 231 aa6.57□□□□□ -1.36
SEC20YDR498C PTC5Q12511 572 aa6.57□□□□□ -1.36
SEC20YDR498C RAD61Q99359 647 aa6.57□□□□□ -1.36
SEC20YDR498C HSP82P02829 709 aaKnown RBP6.56□□□□□ -1.36
SEC20YDR498C CTT1P06115 562 aa6.56□□□□□ -1.36
SEC20YDR498C BMH2P34730 273 aaKnown RBP6.56□□□□□ -1.36
SEC20YDR498C STV1P37296 890 aa6.56□□□□□ -1.36
SEC20YDR498C RRP8P38961 392 aaKnown RBP6.56□□□□□ -1.36
SEC20YDR498C YER130CP39959 443 aa6.56□□□□□ -1.36
SEC20YDR498C APL6P46682 809 aa6.56□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms