RNA–Protein interactions for RNA: YDR420W

HKR1, Transcript of Mucin family member that functions as an osmosensor in the HOG pathway, yeastyeast

Gene HKR1, Length 5,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HKR1YDR420W LOC1P43586 204 aaPredicted RBP1.54□□□□□ -2.16
HKR1YDR420W PEX14P53112 341 aa1.54□□□□□ -2.16
HKR1YDR420W SDA1P53313 767 aaKnown RBP1.54□□□□□ -2.16
HKR1YDR420W ADA2Q02336 434 aa1.54□□□□□ -2.16
HKR1YDR420W NYV1Q12255 253 aa1.54□□□□□ -2.16
HKR1YDR420W BRR1Q99177 341 aaPredicted RBP1.54□□□□□ -2.16
HKR1YDR420W EDE1P34216 1381 aa1.54□□□□□ -2.16
HKR1YDR420W RPS3P05750 240 aaKnown RBP1.54□□□□□ -2.16
HKR1YDR420W ARD1P07347 238 aaPredicted RBP1.54□□□□□ -2.16
HKR1YDR420W IDI1P15496 288 aa1.54□□□□□ -2.16
HKR1YDR420W SEN2P16658 377 aa1.54□□□□□ -2.16
HKR1YDR420W MRC1P25588 1096 aa1.54□□□□□ -2.16
HKR1YDR420W NIP100P33420 868 aa1.54□□□□□ -2.16
HKR1YDR420W RMA1P36001 430 aaKnown RBP1.54□□□□□ -2.16
HKR1YDR420W POP7P38291 140 aa1.54□□□□□ -2.16
HKR1YDR420W VMA22P38784 181 aa1.54□□□□□ -2.16
HKR1YDR420W UTP9P38882 575 aaKnown RBP1.54□□□□□ -2.16
HKR1YDR420W SAP1P39955 897 aaKnown RBP1.54□□□□□ -2.16
HKR1YDR420W SBE2P42223 864 aaKnown RBP1.54□□□□□ -2.16
HKR1YDR420W GPI8P49018 411 aa1.54□□□□□ -2.16
HKR1YDR420W MRN1Q08925 612 aaKnown RBP RIP-Chip data1.54□□□□□ -2.16not detected
HKR1YDR420W CDC16P09798 840 aa1.54□□□□□ -2.16
HKR1YDR420W RPS8AP0CX39 200 aaKnown RBP1.54□□□□□ -2.16
HKR1YDR420W RPS8BP0CX40 200 aaKnown RBP1.54□□□□□ -2.16
HKR1YDR420W YEF3P16521 1044 aaKnown RBP1.54□□□□□ -2.16
HKR1YDR420W SMY2P32909 740 aaKnown RBP1.54□□□□□ -2.16
HKR1YDR420W MTC2P34246 357 aa1.54□□□□□ -2.16
HKR1YDR420W NMD3P38861 518 aaKnown RBP1.54□□□□□ -2.16
HKR1YDR420W PMC1P38929 1173 aaPredicted RBP1.54□□□□□ -2.16
HKR1YDR420W SHE4P51534 789 aa1.54□□□□□ -2.16
HKR1YDR420W ITC1P53125 1264 aa1.54□□□□□ -2.16
HKR1YDR420W CAF130P53280 1122 aaPredicted RBP1.54□□□□□ -2.16
HKR1YDR420W HPC2Q01448 625 aa1.54□□□□□ -2.16
HKR1YDR420W VTC3Q02725 835 aa1.54□□□□□ -2.16
HKR1YDR420W NDL1Q06568 189 aa1.54□□□□□ -2.16
HKR1YDR420W PSR2Q07949 397 aa1.54□□□□□ -2.16
HKR1YDR420W APL4Q12028 832 aa1.54□□□□□ -2.16
HKR1YDR420W ICL2Q12031 575 aa1.54□□□□□ -2.16
HKR1YDR420W RAD53P22216 821 aa1.54□□□□□ -2.16
HKR1YDR420W PSO2P30620 661 aa1.54□□□□□ -2.16
HKR1YDR420W FUN30P31380 1131 aa1.54□□□□□ -2.16
HKR1YDR420W VPS51P36116 164 aa1.54□□□□□ -2.16
HKR1YDR420W GDT1P38301 280 aaPredicted RBP1.54□□□□□ -2.16
HKR1YDR420W HSM3P38348 480 aa1.54□□□□□ -2.16
HKR1YDR420W UBP12P39538 1254 aa1.54□□□□□ -2.16
HKR1YDR420W LAM5P43560 674 aa1.54□□□□□ -2.16
HKR1YDR420W ENV11P53246 860 aa1.54□□□□□ -2.16
HKR1YDR420W YNR061CP53747 219 aa1.54□□□□□ -2.16
HKR1YDR420W PKH1Q03407 766 aa1.54□□□□□ -2.16
HKR1YDR420W ADE13Q05911 482 aaKnown RBP1.54□□□□□ -2.16
HKR1YDR420W YDL073WQ07454 984 aa1.54□□□□□ -2.16
HKR1YDR420W AIM7Q12156 149 aa1.54□□□□□ -2.16
HKR1YDR420W TUS1Q06412 1307 aa1.54□□□□□ -2.16
HKR1YDR420W CYB2P00175 591 aa1.53□□□□□ -2.16
HKR1YDR420W TAF13P11747 167 aa1.53□□□□□ -2.16
HKR1YDR420W RPC82P32349 654 aa1.53□□□□□ -2.16
HKR1YDR420W SMI1P32566 505 aa1.53□□□□□ -2.16
HKR1YDR420W ELM1P32801 640 aa1.53□□□□□ -2.16
HKR1YDR420W YKL091CP33324 310 aaKnown RBP1.53□□□□□ -2.16
HKR1YDR420W KDX1P36005 433 aa1.53□□□□□ -2.16
HKR1YDR420W RRN3P36070 627 aa1.53□□□□□ -2.16
HKR1YDR420W BCH2P36122 765 aa1.53□□□□□ -2.16
HKR1YDR420W MTW1P39731 289 aa1.53□□□□□ -2.16
HKR1YDR420W FYV8P46949 817 aaKnown RBP1.53□□□□□ -2.16
HKR1YDR420W MAD3P47074 515 aa1.53□□□□□ -2.16
HKR1YDR420W MSN5P52918 1224 aa1.53□□□□□ -2.16
HKR1YDR420W KAR5Q04746 504 aa1.53□□□□□ -2.16
HKR1YDR420W CRN1Q06440 651 aa1.53□□□□□ -2.16
HKR1YDR420W VIP1Q06685 1146 aaKnown RBP1.53□□□□□ -2.16
HKR1YDR420W PSK2Q08217 1101 aa1.53□□□□□ -2.16
HKR1YDR420W SNT2P53127 1403 aa1.53□□□□□ -2.16
HKR1YDR420W POL3P15436 1097 aa1.53□□□□□ -2.16
HKR1YDR420W SFP1P32432 683 aa1.53□□□□□ -2.16
HKR1YDR420W RRN6P32786 894 aa1.53□□□□□ -2.16
HKR1YDR420W MPE1P35728 441 aaKnown RBP1.53□□□□□ -2.16
HKR1YDR420W OTU2P38747 307 aaKnown RBP1.53□□□□□ -2.16
HKR1YDR420W HSE1P38753 452 aa1.53□□□□□ -2.16
HKR1YDR420W YHR218WP38899 603 aa1.53□□□□□ -2.16
HKR1YDR420W SWD1P39706 426 aa1.53□□□□□ -2.16
HKR1YDR420W PHB1P40961 287 aa1.53□□□□□ -2.16
HKR1YDR420W YJL181WP46987 611 aa1.53□□□□□ -2.16
HKR1YDR420W ARP5P53946 755 aa1.53□□□□□ -2.16
HKR1YDR420W UBP3Q01477 912 aaKnown RBP RIP-Chip data1.53□□□□□ -2.16not detected
HKR1YDR420W RBA50Q04418 439 aa1.53□□□□□ -2.16
HKR1YDR420W RPN7Q06103 429 aaKnown RBP1.53□□□□□ -2.16
HKR1YDR420W JIP5Q06214 492 aaPredicted RBP1.53□□□□□ -2.16
HKR1YDR420W RSC2Q06488 889 aa1.53□□□□□ -2.16
HKR1YDR420W RTC5Q12108 567 aaKnown RBP1.53□□□□□ -2.16
HKR1YDR420W SLP1Q12232 587 aa1.53□□□□□ -2.16
HKR1YDR420W LSO2Q3E772 92 aaKnown RBP1.53□□□□□ -2.16
HKR1YDR420W YBL111CQ3E7Y5 667 aa1.53□□□□□ -2.16
HKR1YDR420W IRA2P19158 3079 aa1.53□□□□□ -2.16
HKR1YDR420W CAT8P39113 1433 aa1.53□□□□□ -2.16
HKR1YDR420W RAD3P06839 778 aa1.53□□□□□ -2.16
HKR1YDR420W PMS1P14242 873 aa1.53□□□□□ -2.16
HKR1YDR420W APN1P22936 367 aa1.53□□□□□ -2.16
HKR1YDR420W BUD31P25337 157 aaPredicted RBP1.53□□□□□ -2.16
HKR1YDR420W DPH5P32469 300 aaPredicted RBP1.53□□□□□ -2.16
HKR1YDR420W LYP1P32487 611 aa1.53□□□□□ -2.16
HKR1YDR420W NIP1P32497 812 aaKnown RBP1.53□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms