Protein–RNA interactions for Protein: P0CX40

RPS8B, 40S ribosomal protein S8-B, yeastyeast

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS8BP0CX40 YML009W-BYML009W-B 477 nt15.21■□□□□ 0.03
RPS8BP0CX40 NOP1YDL014W 984 nt15.17■□□□□ 0.02
RPS8BP0CX40 NSR1YGR159C 1245 nt14.81□□□□□ -0.04
RPS8BP0CX40 YKL036CYKL036C 393 nt14.29□□□□□ -0.12
RPS8BP0CX40 YJL027CYJL027C 417 nt13.41□□□□□ -0.26
RPS8BP0CX40 Q0297Q0297 156 nt13.26□□□□□ -0.29
RPS8BP0CX40 MDJ1YFL016C 1536 nt13.23□□□□□ -0.29
RPS8BP0CX40 SRX1YKL086W 384 nt13.11□□□□□ -0.31
RPS8BP0CX40 SCS3YGL126W 1143 nt13.08□□□□□ -0.32
RPS8BP0CX40 YCR051WYCR051W 669 nt12.49□□□□□ -0.41
RPS8BP0CX40 SCJ1YMR214W 1134 nt12.38□□□□□ -0.43
RPS8BP0CX40 YOL085CYOL085C 342 nt12.25□□□□□ -0.45
RPS8BP0CX40 PKP1YIL042C 1185 nt11.94□□□□□ -0.5
RPS8BP0CX40 RPP1BYDL130W 321 nt11.91□□□□□ -0.5
RPS8BP0CX40 ATS1YAL020C 1002 nt11.88□□□□□ -0.51
RPS8BP0CX40 TRN1tP(UGG)A 72 nt11.51□□□□□ -0.57
RPS8BP0CX40 SUF9tP(UGG)F 72 nt11.51□□□□□ -0.57
RPS8BP0CX40 SUF8tP(UGG)H 72 nt11.51□□□□□ -0.57
RPS8BP0CX40 tP(UGG)LtP(UGG)L 72 nt11.51□□□□□ -0.57
RPS8BP0CX40 SUF7tP(UGG)M 72 nt11.51□□□□□ -0.57
RPS8BP0CX40 tP(UGG)N1tP(UGG)N1 72 nt11.51□□□□□ -0.57
RPS8BP0CX40 tP(UGG)N2tP(UGG)N2 72 nt11.51□□□□□ -0.57
RPS8BP0CX40 tP(UGG)O1tP(UGG)O1 72 nt11.51□□□□□ -0.57
RPS8BP0CX40 SUF11tP(UGG)O2 72 nt11.51□□□□□ -0.57
RPS8BP0CX40 DBP2YNL112W 1641 nt11.49□□□□□ -0.57
RPS8BP0CX40 SCR1SCR1 522 nt11.48□□□□□ -0.57
RPS8BP0CX40 SSA3YBL075C 1950 nt11.47□□□□□ -0.57
RPS8BP0CX40 YBR190WYBR190W 312 nt11.43□□□□□ -0.58
RPS8BP0CX40 CCC1YLR220W 969 nt11.42□□□□□ -0.58
RPS8BP0CX40 PET122YER153C 765 nt11.21□□□□□ -0.61
RPS8BP0CX40 RTC3YHR087W 336 nt11.16□□□□□ -0.62
RPS8BP0CX40 tP(UGG)O3tP(UGG)O3 72 nt11.06□□□□□ -0.64
RPS8BP0CX40 RVS167YDR388W 1449 nt11□□□□□ -0.65
RPS8BP0CX40 RRN5YLR141W 1092 nt10.98□□□□□ -0.65
RPS8BP0CX40 RSB1YOR049C 1065 nt10.97□□□□□ -0.65
RPS8BP0CX40 PST2YDR032C 597 nt10.87□□□□□ -0.67
RPS8BP0CX40 YKL097CYKL097C 411 nt10.81□□□□□ -0.68
RPS8BP0CX40 YDJ1YNL064C 1230 nt10.77□□□□□ -0.69
RPS8BP0CX40 PUT4YOR348C 1884 nt10.76□□□□□ -0.69
RPS8BP0CX40 YER088W-BYER088W-B 147 nt10.74□□□□□ -0.69
RPS8BP0CX40 SHR5YOL110W 714 nt10.58□□□□□ -0.72
RPS8BP0CX40 ARE1YCR048W 1833 nt10.42□□□□□ -0.74
RPS8BP0CX40 POA1YBR022W 534 nt10.4□□□□□ -0.74
RPS8BP0CX40 GAR1YHR089C 618 nt10.39□□□□□ -0.75
RPS8BP0CX40 YHR049C-AYHR049C-A 297 nt10.3□□□□□ -0.76
RPS8BP0CX40 SHU1YHL006C 453 nt10.28□□□□□ -0.76
RPS8BP0CX40 BSC6YOL137W 1494 nt10.27□□□□□ -0.77
RPS8BP0CX40 SAH1YER043C 1350 nt10.26□□□□□ -0.77
RPS8BP0CX40 URN1YPR152C 1398 nt10.25□□□□□ -0.77
RPS8BP0CX40 OPI9YLR338W 858 nt10.21□□□□□ -0.77
RPS8BP0CX40 NPL3YDR432W 1245 nt10.16□□□□□ -0.78
RPS8BP0CX40 SPT5YML010W 3192 nt10.15□□□□□ -0.78
RPS8BP0CX40 RPN10YHR200W 807 nt10.15□□□□□ -0.78
RPS8BP0CX40 DEP1YAL013W 1218 nt10.09□□□□□ -0.79
RPS8BP0CX40 SSA4YER103W 1929 nt10.07□□□□□ -0.8
RPS8BP0CX40 YOR139CYOR139C 393 nt10.07□□□□□ -0.8
RPS8BP0CX40 YNL208WYNL208W 600 nt10.06□□□□□ -0.8
RPS8BP0CX40 TIR1YER011W 765 nt10.04□□□□□ -0.8
RPS8BP0CX40 BUD23YCR047C 828 nt10.02□□□□□ -0.81
RPS8BP0CX40 YAL037C-BYAL037C-B 975 nt9.93□□□□□ -0.82
RPS8BP0CX40 PUN1YLR414C 792 nt9.92□□□□□ -0.82
RPS8BP0CX40 YGR021WYGR021W 873 nt9.89□□□□□ -0.83
RPS8BP0CX40 YOL037CYOL037C 354 nt9.88□□□□□ -0.83
RPS8BP0CX40 PTC2YER089C 1395 nt9.88□□□□□ -0.83
RPS8BP0CX40 NAB2YGL122C 1578 nt9.82□□□□□ -0.84
RPS8BP0CX40 YJR018WYJR018W 363 nt9.75□□□□□ -0.85
RPS8BP0CX40 Q0182Q0182 405 nt9.73□□□□□ -0.85
RPS8BP0CX40 BDF1YLR399C 2061 nt9.73□□□□□ -0.85
RPS8BP0CX40 tM(CAU)CtM(CAU)C 72 nt9.71□□□□□ -0.86
RPS8BP0CX40 IMT4tM(CAU)E 72 nt9.71□□□□□ -0.86
RPS8BP0CX40 IMT3tM(CAU)J3 72 nt9.71□□□□□ -0.86
RPS8BP0CX40 IMT1tM(CAU)O1 72 nt9.71□□□□□ -0.86
RPS8BP0CX40 IMT2tM(CAU)P 72 nt9.71□□□□□ -0.86
RPS8BP0CX40 MEP2YNL142W 1500 nt9.7□□□□□ -0.86
RPS8BP0CX40 HOM6YJR139C 1080 nt9.68□□□□□ -0.86
RPS8BP0CX40 SSA1YAL005C 1929 nt9.68□□□□□ -0.86
RPS8BP0CX40 RPP2BYDR382W 333 nt9.66□□□□□ -0.86
RPS8BP0CX40 FIS1YIL065C 468 nt9.62□□□□□ -0.87
RPS8BP0CX40 MNP1YGL068W 585 nt9.61□□□□□ -0.87
RPS8BP0CX40 DAL1YIR027C 1383 nt9.6□□□□□ -0.87
RPS8BP0CX40 PAC11YDR488C 1602 nt9.6□□□□□ -0.87
RPS8BP0CX40 TAT1YBR069C 1860 nt9.59□□□□□ -0.87
RPS8BP0CX40 WWM1YFL010C 636 nt9.58□□□□□ -0.88
RPS8BP0CX40 YFL021C-AYFL021C-A 855 nt9.57□□□□□ -0.88
RPS8BP0CX40 RKM5YLR137W 1104 nt9.57□□□□□ -0.88
RPS8BP0CX40 PUS2YGL063W 1113 nt9.56□□□□□ -0.88
RPS8BP0CX40 FPR4YLR449W 1179 nt9.56□□□□□ -0.88
RPS8BP0CX40 MOT3YMR070W 1473 nt9.53□□□□□ -0.88
RPS8BP0CX40 DCW1YKL046C 1350 nt9.51□□□□□ -0.89
RPS8BP0CX40 PHO4YFR034C 939 nt9.5□□□□□ -0.89
RPS8BP0CX40 YPS1YLR120C 1710 nt9.5□□□□□ -0.89
RPS8BP0CX40 YLR281CYLR281C 468 nt9.49□□□□□ -0.89
RPS8BP0CX40 MRPL8YJL063C 717 nt9.48□□□□□ -0.89
RPS8BP0CX40 INM2YDR287W 879 nt9.47□□□□□ -0.89
RPS8BP0CX40 YJR120WYJR120W 351 nt9.46□□□□□ -0.9
RPS8BP0CX40 YHR165W-AYHR165W-A 312 nt9.44□□□□□ -0.9
RPS8BP0CX40 IMP2'YIL154C 1041 nt9.43□□□□□ -0.9
RPS8BP0CX40 LSM3YLR438C-A 270 nt9.43□□□□□ -0.9
RPS8BP0CX40 BDH2YAL061W 1254 nt9.4□□□□□ -0.9
RPS8BP0CX40 YMR090WYMR090W 684 nt9.4□□□□□ -0.9
Retrieved 100 of 7,029 protein–RNA pairs in 13.9 ms