RNA–Protein interactions for RNA: YDR420W

HKR1, Transcript of Mucin family member that functions as an osmosensor in the HOG pathway, yeastyeast

Gene HKR1, Length 5,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HKR1YDR420W RQC2Q12532 1038 aaKnown RBP2.47□□□□□ -2.01
HKR1YDR420W INO80P53115 1489 aa2.22□□□□□ -2.05
HKR1YDR420W TAF7Q05021 590 aa2.21□□□□□ -2.06
HKR1YDR420W MTC1P47018 478 aaKnown RBP2.2□□□□□ -2.06
HKR1YDR420W FAP1P53971 965 aa2.19□□□□□ -2.06
HKR1YDR420W DRS1P32892 752 aaKnown RBP2.17□□□□□ -2.06
HKR1YDR420W RSE1Q04693 1361 aaKnown RBP2.14□□□□□ -2.07
HKR1YDR420W AIM44Q99299 758 aa2.11□□□□□ -2.07
HKR1YDR420W SPT21P35209 758 aa2.1□□□□□ -2.07
HKR1YDR420W MON2P48563 1636 aaPredicted RBP2.09□□□□□ -2.07
HKR1YDR420W DNA2P38859 1522 aa2.08□□□□□ -2.08
HKR1YDR420W TFA1P36100 482 aa2.07□□□□□ -2.08
HKR1YDR420W BFR2Q06631 534 aaKnown RBP2.07□□□□□ -2.08
HKR1YDR420W PRY3P47033 881 aa2.06□□□□□ -2.08
HKR1YDR420W TOM1Q03280 3268 aa2.03□□□□□ -2.08
HKR1YDR420W SWR1Q05471 1514 aa2.02□□□□□ -2.09
HKR1YDR420W YRB30P53107 440 aaPredicted RBP2□□□□□ -2.09
HKR1YDR420W KOG1P38873 1557 aa1.99□□□□□ -2.09
HKR1YDR420W MNN4P36044 1178 aa1.98□□□□□ -2.09
HKR1YDR420W SPA2P23201 1466 aaKnown RBP1.97□□□□□ -2.09
HKR1YDR420W NAB3P38996 802 aaKnown RBP RIP-Chip data1.96□□□□□ -2.1not detected
HKR1YDR420W TY1B-DR4Q07793 1604 aa1.95□□□□□ -2.1
HKR1YDR420W TAF2P23255 1407 aa1.95□□□□□ -2.1
HKR1YDR420W NSR1P27476 414 aaKnown RBP RIP-Chip data1.94□□□□□ -2.1not detected
HKR1YDR420W URN1Q06525 465 aaKnown RBP1.94□□□□□ -2.1
HKR1YDR420W DMA1P38823 416 aa1.93□□□□□ -2.1
HKR1YDR420W ECM5Q03214 1411 aa1.93□□□□□ -2.1
HKR1YDR420W LEO1P38439 464 aa1.93□□□□□ -2.1
HKR1YDR420W SAS10Q12136 610 aaPredicted RBP1.93□□□□□ -2.1
HKR1YDR420W SGS1P35187 1447 aa1.92□□□□□ -2.1
HKR1YDR420W TSR3Q12094 313 aaKnown RBP1.92□□□□□ -2.1
HKR1YDR420W SPT6P23615 1451 aaKnown RBP1.91□□□□□ -2.1
HKR1YDR420W CAB3P36076 571 aa1.91□□□□□ -2.1
HKR1YDR420W TCB3Q03640 1545 aaKnown RBP1.91□□□□□ -2.1
HKR1YDR420W DCD1P06773 312 aa1.9□□□□□ -2.11
HKR1YDR420W SKI3P17883 1432 aaKnown RBP1.9□□□□□ -2.11
HKR1YDR420W FPR3P38911 411 aaKnown RBP1.89□□□□□ -2.11
HKR1YDR420W ABP1P15891 592 aaKnown RBP1.88□□□□□ -2.11
HKR1YDR420W HSL1P34244 1518 aa1.88□□□□□ -2.11
HKR1YDR420W XRN1P22147 1528 aaKnown RBP1.87□□□□□ -2.11
HKR1YDR420W HGH1P48362 394 aaKnown RBP1.87□□□□□ -2.11
HKR1YDR420W NAP1P25293 417 aaKnown RBP1.86□□□□□ -2.11
HKR1YDR420W RIX1P38883 763 aaPredicted RBP1.86□□□□□ -2.11
HKR1YDR420W PLP2Q12017 286 aa1.86□□□□□ -2.11
HKR1YDR420W RPS0BP46654 252 aaKnown RBP1.86□□□□□ -2.11
HKR1YDR420W BUD4P47136 1447 aa1.86□□□□□ -2.11
HKR1YDR420W SUB1P54000 292 aaKnown RBP1.86□□□□□ -2.11
HKR1YDR420W HIR3P47171 1648 aa1.86□□□□□ -2.11
HKR1YDR420W QCR6P00127 147 aa1.85□□□□□ -2.11
HKR1YDR420W MDS3P53094 1487 aa1.85□□□□□ -2.11
HKR1YDR420W RPG1P38249 964 aaKnown RBP1.85□□□□□ -2.11
HKR1YDR420W TOP1P04786 769 aa1.84□□□□□ -2.11
HKR1YDR420W MIF2P35201 549 aa1.84□□□□□ -2.11
HKR1YDR420W EBP2P36049 427 aaKnown RBP1.84□□□□□ -2.11
HKR1YDR420W YCK3P39962 524 aa1.84□□□□□ -2.11
HKR1YDR420W BPT1P14772 1559 aa1.84□□□□□ -2.12
HKR1YDR420W HSP82P02829 709 aaKnown RBP1.84□□□□□ -2.12
HKR1YDR420W RLF2Q12495 606 aa1.84□□□□□ -2.12
HKR1YDR420W YFR006WP43590 535 aa1.83□□□□□ -2.12
HKR1YDR420W SIS2P36024 562 aa1.83□□□□□ -2.12
HKR1YDR420W NOP7P53261 605 aaKnown RBP1.82□□□□□ -2.12
HKR1YDR420W VPS72Q03388 795 aa1.82□□□□□ -2.12
HKR1YDR420W REV3P14284 1504 aa1.81□□□□□ -2.12
HKR1YDR420W ASF1P32447 279 aa1.8□□□□□ -2.12
HKR1YDR420W ESC1Q03661 1658 aaKnown RBP1.8□□□□□ -2.12
HKR1YDR420W NOP2P40991 618 aaKnown RBP1.8□□□□□ -2.12
HKR1YDR420W ITT1Q04638 464 aa1.8□□□□□ -2.12
HKR1YDR420W DIP2Q12220 943 aaPredicted RBP1.8□□□□□ -2.12
HKR1YDR420W THO2P53552 1597 aaKnown RBP1.8□□□□□ -2.12
HKR1YDR420W YGL081WP53156 320 aa1.8□□□□□ -2.12
HKR1YDR420W HSC82P15108 705 aaKnown RBP1.79□□□□□ -2.12
HKR1YDR420W PSH1Q12161 406 aa1.79□□□□□ -2.12
HKR1YDR420W ATG2P53855 1592 aa1.78□□□□□ -2.12
HKR1YDR420W RPS0AP32905 252 aaKnown RBP1.78□□□□□ -2.12
HKR1YDR420W HUL5P53119 910 aa1.78□□□□□ -2.12
HKR1YDR420W BRL1P38770 471 aa1.78□□□□□ -2.12
HKR1YDR420W UFD4P33202 1483 aa1.78□□□□□ -2.12
HKR1YDR420W RNA1P11745 407 aaKnown RBP1.77□□□□□ -2.13
HKR1YDR420W YCF1P39109 1515 aaKnown RBP1.77□□□□□ -2.13
HKR1YDR420W PET111P08468 800 aa1.77□□□□□ -2.13
HKR1YDR420W PTP3P40048 928 aa1.77□□□□□ -2.13
HKR1YDR420W FKH1P40466 484 aa1.77□□□□□ -2.13
HKR1YDR420W HOP09932 586 aa1.77□□□□□ -2.13
HKR1YDR420W YPR148CQ06523 435 aa1.77□□□□□ -2.13
HKR1YDR420W LEU3P08638 886 aa1.76□□□□□ -2.13
HKR1YDR420W PSD2P53037 1138 aaKnown RBP1.76□□□□□ -2.13
HKR1YDR420W RLP24Q07915 199 aaKnown RBP1.76□□□□□ -2.13
HKR1YDR420W SEC27P41811 889 aaKnown RBP1.76□□□□□ -2.13
HKR1YDR420W SNU71P53207 620 aaKnown RBP1.76□□□□□ -2.13
HKR1YDR420W PEP1P32319 1579 aa1.76□□□□□ -2.13
HKR1YDR420W MMS1Q06211 1407 aa1.76□□□□□ -2.13
HKR1YDR420W HXT13P39924 564 aa1.76□□□□□ -2.13
HKR1YDR420W NST1P53935 1240 aa1.76□□□□□ -2.13
HKR1YDR420W IFH1P39520 1085 aa1.75□□□□□ -2.13
HKR1YDR420W YMR265CQ03508 461 aaKnown RBP1.75□□□□□ -2.13
HKR1YDR420W RPL17AP05740 184 aaKnown RBP1.75□□□□□ -2.13
HKR1YDR420W RPL17BP46990 184 aaKnown RBP1.75□□□□□ -2.13
HKR1YDR420W DMA2P53924 522 aa1.75□□□□□ -2.13
HKR1YDR420W SLD2P34252 453 aa1.75□□□□□ -2.13
HKR1YDR420W SEC3P33332 1336 aaKnown RBP1.75□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms