RNA–Protein interactions for RNA: YDR337W

MRPS28, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene MRPS28, Length 861 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MRPS28	YDR337W	CSM2	P40465	213 aa		7.73	□□□□□ -1.17
MRPS28	YDR337W	MSH4	P40965	878 aa	Predicted RBP	7.73	□□□□□ -1.17
MRPS28	YDR337W	CIR1	P42940	261 aa		7.73	□□□□□ -1.17
MRPS28	YDR337W	YGR117C	P53270	476 aa		7.73	□□□□□ -1.17
MRPS28	YDR337W	MBR1	P23493	339 aa		7.72	□□□□□ -1.17
MRPS28	YDR337W	PRE8	P23639	250 aa		7.72	□□□□□ -1.17
MRPS28	YDR337W	ADP1	P25371	1049 aa		7.72	□□□□□ -1.17
MRPS28	YDR337W	ALG2	P43636	503 aa		7.72	□□□□□ -1.17
MRPS28	YDR337W	RPT6	Q01939	405 aa	Known RBP	7.72	□□□□□ -1.17
MRPS28	YDR337W	MYO5	Q04439	1219 aa	Known RBP	7.72	□□□□□ -1.17
MRPS28	YDR337W	YDL124W	Q07551	312 aa	Known RBP	7.72	□□□□□ -1.17
MRPS28	YDR337W	APC11	Q12157	165 aa		7.72	□□□□□ -1.17
MRPS28	YDR337W	YOR111W	Q99210	232 aa		7.72	□□□□□ -1.17
MRPS28	YDR337W	THS1	P04801	734 aa	Known RBP	7.71	□□□□□ -1.18
MRPS28	YDR337W	PMA1	P05030	918 aa	Known RBP	7.71	□□□□□ -1.18
MRPS28	YDR337W	DIT2	P21595	489 aa		7.71	□□□□□ -1.18
MRPS28	YDR337W	RPL8B	P29453	256 aa	Known RBP	7.71	□□□□□ -1.18
MRPS28	YDR337W	BMH2	P34730	273 aa	Known RBP	7.71	□□□□□ -1.18
MRPS28	YDR337W	HYR1	P40581	163 aa	Known RBP	7.71	□□□□□ -1.18
MRPS28	YDR337W	PIL1	P53252	339 aa	Known RBP	7.71	□□□□□ -1.18
MRPS28	YDR337W	TIM50	Q02776	476 aa		7.71	□□□□□ -1.18
MRPS28	YDR337W	KIN1	P13185	1064 aa		7.7	□□□□□ -1.18
MRPS28	YDR337W	VPS1	P21576	704 aa	Known RBP	7.7	□□□□□ -1.18
MRPS28	YDR337W	SRM1	P21827	482 aa		7.7	□□□□□ -1.18
MRPS28	YDR337W	KEL1	P38853	1164 aa	Known RBP	7.7	□□□□□ -1.18
MRPS28	YDR337W	FOL1	P53848	824 aa		7.7	□□□□□ -1.18
MRPS28	YDR337W	MET6	P05694	767 aa	Known RBP	7.69	□□□□□ -1.18
MRPS28	YDR337W	CDC6	P09119	513 aa		7.69	□□□□□ -1.18
MRPS28	YDR337W	KEX1	P09620	729 aa		7.69	□□□□□ -1.18
MRPS28	YDR337W	CBP3	P21560	335 aa		7.69	□□□□□ -1.18
MRPS28	YDR337W	RAD53	P22216	821 aa		7.69	□□□□□ -1.18
MRPS28	YDR337W	CHS3	P29465	1165 aa		7.69	□□□□□ -1.18
MRPS28	YDR337W	RTG2	P32608	588 aa	Known RBP	7.69	□□□□□ -1.18
MRPS28	YDR337W	ELM1	P32801	640 aa		7.69	□□□□□ -1.18
MRPS28	YDR337W	DID4	P36108	232 aa		7.69	□□□□□ -1.18
MRPS28	YDR337W	CST26	P38226	397 aa		7.69	□□□□□ -1.18
MRPS28	YDR337W	CCT5	P40413	562 aa	Known RBP	7.69	□□□□□ -1.18
MRPS28	YDR337W	NIT1	P40447	199 aa		7.69	□□□□□ -1.18
MRPS28	YDR337W	RSM25	P40496	264 aa		7.69	□□□□□ -1.18
MRPS28	YDR337W	PCI8	P40512	444 aa		7.69	□□□□□ -1.18
MRPS28	YDR337W	YDR341C	Q05506	607 aa	Known RBP	7.69	□□□□□ -1.18
MRPS28	YDR337W	NUC1	P08466	329 aa		7.68	□□□□□ -1.18
MRPS28	YDR337W	FRS2	P15625	503 aa	Known RBP	7.68	□□□□□ -1.18
MRPS28	YDR337W	STI1	P15705	589 aa	Known RBP RIP-Chip data	7.68	□□□□□ -1.18	not detected
MRPS28	YDR337W	RNR3	P21672	869 aa	Known RBP	7.68	□□□□□ -1.18
MRPS28	YDR337W	RXT2	P38255	430 aa		7.68	□□□□□ -1.18
MRPS28	YDR337W	RVS167	P39743	482 aa	Known RBP	7.68	□□□□□ -1.18
MRPS28	YDR337W	EMP47	P43555	445 aa		7.68	□□□□□ -1.18
MRPS28	YDR337W	VPS30	Q02948	557 aa		7.68	□□□□□ -1.18
MRPS28	YDR337W	SKG3	Q06315	1026 aa		7.68	□□□□□ -1.18
MRPS28	YDR337W	LAP2	Q10740	671 aa		7.68	□□□□□ -1.18
MRPS28	YDR337W	DCS2	Q12123	353 aa		7.68	□□□□□ -1.18
MRPS28	YDR337W	FAS2	P19097	1887 aa	Known RBP	7.68	□□□□□ -1.18
MRPS28	YDR337W	FIG2	P25653	1609 aa		7.67	□□□□□ -1.18
MRPS28	YDR337W	PGI1	P12709	554 aa	Known RBP	7.67	□□□□□ -1.18
MRPS28	YDR337W	SAM2	P19358	384 aa	Known RBP	7.67	□□□□□ -1.18
MRPS28	YDR337W	SRP54	P20424	541 aa	Known RBP	7.67	□□□□□ -1.18
MRPS28	YDR337W	RPN12	P32496	274 aa		7.67	□□□□□ -1.18
MRPS28	YDR337W	MDM1	Q01846	1127 aa		7.67	□□□□□ -1.18
MRPS28	YDR337W	GDE1	Q02979	1223 aa		7.67	□□□□□ -1.18
MRPS28	YDR337W	GIS4	Q04233	774 aa		7.67	□□□□□ -1.18
MRPS28	YDR337W	CSC1	Q06538	782 aa		7.67	□□□□□ -1.18
MRPS28	YDR337W	TUB2	P02557	457 aa	Known RBP	7.66	□□□□□ -1.18
MRPS28	YDR337W	KNS1	P32350	737 aa	Predicted RBP	7.66	□□□□□ -1.18
MRPS28	YDR337W	TPS3	P38426	1054 aa	Known RBP	7.66	□□□□□ -1.18
MRPS28	YDR337W	VPS45	P38932	577 aa		7.66	□□□□□ -1.18
MRPS28	YDR337W	EIS1	Q05050	843 aa	Known RBP	7.66	□□□□□ -1.18
MRPS28	YDR337W	DSE3	Q08729	430 aa		7.66	□□□□□ -1.18
MRPS28	YDR337W	CLF1	Q12309	687 aa	Predicted RBP	7.66	□□□□□ -1.18
MRPS28	YDR337W	AIM44	Q99299	758 aa		7.66	□□□□□ -1.18
MRPS28	YDR337W	YLR278C	Q05854	1341 aa		7.66	□□□□□ -1.18
MRPS28	YDR337W	CIT1	P00890	479 aa		7.65	□□□□□ -1.18
MRPS28	YDR337W	HXK1	P04806	485 aa	Known RBP	7.65	□□□□□ -1.18
MRPS28	YDR337W	KRS1	P15180	591 aa	Known RBP	7.65	□□□□□ -1.18
MRPS28	YDR337W	RGP1	P16664	663 aa		7.65	□□□□□ -1.18
MRPS28	YDR337W	SPB4	P25808	606 aa	Predicted RBP	7.65	□□□□□ -1.18
MRPS28	YDR337W	FLO1	P32768	1537 aa		7.65	□□□□□ -1.18
MRPS28	YDR337W	TOM71	P38825	639 aa	Known RBP	7.65	□□□□□ -1.18
MRPS28	YDR337W	SNU71	P53207	620 aa	Known RBP	7.65	□□□□□ -1.18
MRPS28	YDR337W	RSC1	P53236	928 aa		7.65	□□□□□ -1.18
MRPS28	YDR337W	VMS1	Q04311	632 aa	Known RBP	7.65	□□□□□ -1.18
MRPS28	YDR337W	SMD2	Q06217	110 aa	Known RBP	7.65	□□□□□ -1.18
MRPS28	YDR337W	ETT1	Q08421	412 aa	Known RBP	7.65	□□□□□ -1.18
MRPS28	YDR337W	GET3	Q12154	354 aa	Known RBP	7.65	□□□□□ -1.18
MRPS28	YDR337W	NBL1	Q3E7Y6	73 aa		7.65	□□□□□ -1.18
MRPS28	YDR337W	DDP1	Q99321	188 aa	Known RBP	7.65	□□□□□ -1.18
MRPS28	YDR337W	TRS33	Q99394	268 aa		7.65	□□□□□ -1.18
MRPS28	YDR337W	ACA1	P39970	489 aa		7.64	□□□□□ -1.19
MRPS28	YDR337W	PUS5	Q06244	254 aa		7.64	□□□□□ -1.19
MRPS28	YDR337W	SUE1	Q06524	206 aa		7.64	□□□□□ -1.19
MRPS28	YDR337W	CEX1	Q12453	761 aa		7.64	□□□□□ -1.19
MRPS28	YDR337W	GPA1	P08539	472 aa		7.63	□□□□□ -1.19
MRPS28	YDR337W	GAL2	P13181	574 aa		7.63	□□□□□ -1.19
MRPS28	YDR337W	PNT1	P38969	423 aa		7.63	□□□□□ -1.19
MRPS28	YDR337W	PES4	P39684	611 aa		7.63	□□□□□ -1.19
MRPS28	YDR337W	ASE1	P50275	885 aa		7.63	□□□□□ -1.19
MRPS28	YDR337W	YGL138C	P53122	345 aa		7.63	□□□□□ -1.19
MRPS28	YDR337W	KRE33	P53914	1056 aa	Known RBP	7.63	□□□□□ -1.19
MRPS28	YDR337W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	7.63	□□□□□ -1.19	not detected
MRPS28	YDR337W	TUS1	Q06412	1307 aa		7.62	□□□□□ -1.19

Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms