RNA–Protein interactions for RNA: YDR337W

MRPS28, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene MRPS28, Length 861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRPS28YDR337W SGS1P35187 1447 aa12.23□□□□□ -0.45
MRPS28YDR337W INO80P53115 1489 aa11.95□□□□□ -0.5
MRPS28YDR337W TCB3Q03640 1545 aaKnown RBP11.82□□□□□ -0.52
MRPS28YDR337W MON2P48563 1636 aaPredicted RBP11.76□□□□□ -0.53
MRPS28YDR337W TY1B-DR4Q07793 1604 aa11.59□□□□□ -0.55
MRPS28YDR337W SSN2P38931 1420 aa11.53□□□□□ -0.56
MRPS28YDR337W SWR1Q05471 1514 aa11.53□□□□□ -0.56
MRPS28YDR337W FAP1P53971 965 aa11.44□□□□□ -0.58
MRPS28YDR337W SPT6P23615 1451 aaKnown RBP11.44□□□□□ -0.58
MRPS28YDR337W HSL1P34244 1518 aa11.4□□□□□ -0.58
MRPS28YDR337W SPA2P23201 1466 aaKnown RBP11.4□□□□□ -0.58
MRPS28YDR337W DRS1P32892 752 aaKnown RBP11.34□□□□□ -0.59
MRPS28YDR337W DNA2P38859 1522 aa11.34□□□□□ -0.59
MRPS28YDR337W HIR3P47171 1648 aa11.2□□□□□ -0.62
MRPS28YDR337W XRN1P22147 1528 aaKnown RBP11.18□□□□□ -0.62
MRPS28YDR337W KOG1P38873 1557 aa11.17□□□□□ -0.62
MRPS28YDR337W ECM5Q03214 1411 aa11.04□□□□□ -0.64
MRPS28YDR337W MTC1P47018 478 aaKnown RBP11.02□□□□□ -0.65
MRPS28YDR337W TAF2P23255 1407 aa11□□□□□ -0.65
MRPS28YDR337W BUD4P47136 1447 aa10.95□□□□□ -0.66
MRPS28YDR337W REV3P14284 1504 aa10.94□□□□□ -0.66
MRPS28YDR337W THO2P53552 1597 aaKnown RBP10.85□□□□□ -0.67
MRPS28YDR337W PRY3P47033 881 aa10.83□□□□□ -0.68
MRPS28YDR337W SKI3P17883 1432 aaKnown RBP10.83□□□□□ -0.68
MRPS28YDR337W SIN3P22579 1536 aa10.78□□□□□ -0.68
MRPS28YDR337W MDS3P53094 1487 aa10.72□□□□□ -0.69
MRPS28YDR337W SSK2P53599 1579 aa10.72□□□□□ -0.69
MRPS28YDR337W RSE1Q04693 1361 aaKnown RBP10.7□□□□□ -0.7
MRPS28YDR337W ATG2P53855 1592 aa10.68□□□□□ -0.7
MRPS28YDR337W PEP1P32319 1579 aa10.65□□□□□ -0.7
MRPS28YDR337W ESP1Q03018 1630 aa10.61□□□□□ -0.71
MRPS28YDR337W YPK9Q12697 1472 aa10.57□□□□□ -0.72
MRPS28YDR337W MYO2P19524 1574 aaKnown RBP10.54□□□□□ -0.72
MRPS28YDR337W UFD4P33202 1483 aa10.53□□□□□ -0.72
MRPS28YDR337W SCC2Q04002 1493 aa10.49□□□□□ -0.73
MRPS28YDR337W RPO31P04051 1460 aa10.47□□□□□ -0.73
MRPS28YDR337W RQC2Q12532 1038 aaKnown RBP10.46□□□□□ -0.73
MRPS28YDR337W POL1P13382 1468 aa10.46□□□□□ -0.74
MRPS28YDR337W STU1P38198 1513 aa10.46□□□□□ -0.74
MRPS28YDR337W BPT1P14772 1559 aa10.4□□□□□ -0.74
MRPS28YDR337W TOP2P06786 1428 aaKnown RBP10.4□□□□□ -0.75
MRPS28YDR337W YTA7P40340 1379 aa10.39□□□□□ -0.75
MRPS28YDR337W SAS10Q12136 610 aaPredicted RBP10.36□□□□□ -0.75
MRPS28YDR337W YCF1P39109 1515 aaKnown RBP10.35□□□□□ -0.75
MRPS28YDR337W YOR1P53049 1477 aa10.34□□□□□ -0.75
MRPS28YDR337W RKR1Q04781 1562 aa10.34□□□□□ -0.75
MRPS28YDR337W SMC4Q12267 1418 aa10.32□□□□□ -0.76
MRPS28YDR337W YCK3P39962 524 aa10.3□□□□□ -0.76
MRPS28YDR337W CHD1P32657 1468 aa10.25□□□□□ -0.77
MRPS28YDR337W AAD16Q02895 342 aa10.21□□□□□ -0.77
MRPS28YDR337W MMS22Q06164 1454 aa10.21□□□□□ -0.78
MRPS28YDR337W SPP41P38904 1435 aa10.19□□□□□ -0.78
MRPS28YDR337W TAF7Q05021 590 aa10.18□□□□□ -0.78
MRPS28YDR337W MYO4P32492 1471 aa10.17□□□□□ -0.78
MRPS28YDR337W PAN1P32521 1480 aa10.17□□□□□ -0.78
MRPS28YDR337W STH1P32597 1359 aa10.17□□□□□ -0.78
MRPS28YDR337W TY2B-LR1P0C2J3 1770 aa10.15□□□□□ -0.78
MRPS28YDR337W TY2B-FP0CX63 1770 aa10.15□□□□□ -0.78
MRPS28YDR337W TY2B-GR2P0CX64 1770 aa10.15□□□□□ -0.78
MRPS28YDR337W TY2B-CP25384 1770 aa10.15□□□□□ -0.78
MRPS28YDR337W TY2B-DR2Q03494 1770 aa10.15□□□□□ -0.78
MRPS28YDR337W TY1B-DR1Q03855 1755 aa10.15□□□□□ -0.78
MRPS28YDR337W TY2B-DR3Q07791 1770 aaKnown RBP10.15□□□□□ -0.78
MRPS28YDR337W TY2B-OR1Q12113 1770 aa10.15□□□□□ -0.78
MRPS28YDR337W TY2B-DR1Q12472 1770 aa10.15□□□□□ -0.78
MRPS28YDR337W TY2B-OR2Q12501 1770 aa10.15□□□□□ -0.78
MRPS28YDR337W CDC25P04821 1589 aa10.14□□□□□ -0.79
MRPS28YDR337W IFH1P39520 1085 aa10.13□□□□□ -0.79
MRPS28YDR337W HAA1Q12753 694 aaKnown RBP10.13□□□□□ -0.79
MRPS28YDR337W TSC11P40061 1430 aa10.12□□□□□ -0.79
MRPS28YDR337W PRI1P10363 409 aa10.11□□□□□ -0.79
MRPS28YDR337W TRM732Q03496 1420 aa10.08□□□□□ -0.8
MRPS28YDR337W RTT106P40161 455 aa10.08□□□□□ -0.8
MRPS28YDR337W SNQ2P32568 1501 aaKnown RBP10.07□□□□□ -0.8
MRPS28YDR337W TY1B-DR3Q99231 1755 aa10.07□□□□□ -0.8
MRPS28YDR337W DNF1P32660 1571 aa10.05□□□□□ -0.8
MRPS28YDR337W TY1B-BRQ12193 1756 aa10.04□□□□□ -0.8
MRPS28YDR337W TY1B-GR3Q12316 1755 aa10.04□□□□□ -0.8
MRPS28YDR337W TY2B-BQ12491 1770 aa10.04□□□□□ -0.8
MRPS28YDR337W TY1B-ORQ92393 1755 aa10.04□□□□□ -0.8
MRPS28YDR337W VTH1P40438 1549 aa10.02□□□□□ -0.81
MRPS28YDR337W VTH2P40890 1549 aa10.02□□□□□ -0.81
MRPS28YDR337W SNT2P53127 1403 aa9.99□□□□□ -0.81
MRPS28YDR337W TY1B-HO13535 1793 aa9.98□□□□□ -0.81
MRPS28YDR337W TY1B-DR5P0C2I2 1755 aa9.98□□□□□ -0.81
MRPS28YDR337W TY1B-DR6P0C2I3 1755 aa9.98□□□□□ -0.81
MRPS28YDR337W TY1B-LR2P0C2I5 1755 aa9.98□□□□□ -0.81
MRPS28YDR337W TY1B-LR3P0C2I6 1755 aaKnown RBP9.98□□□□□ -0.81
MRPS28YDR337W TY1B-PR1P0C2I9 1755 aaKnown RBP9.98□□□□□ -0.81
MRPS28YDR337W TY1B-PR2P0C2J0 1756 aa9.98□□□□□ -0.81
MRPS28YDR337W TY1B-PR3P0C2J1 1755 aaKnown RBP9.98□□□□□ -0.81
MRPS28YDR337W TY1B-JR1P47098 1755 aa9.98□□□□□ -0.81
MRPS28YDR337W TY1B-ML2Q03434 1755 aaKnown RBP9.98□□□□□ -0.81
MRPS28YDR337W TY1B-ER1Q03612 1755 aa9.98□□□□□ -0.81
MRPS28YDR337W TY1B-ML1Q04711 1755 aaKnown RBP9.98□□□□□ -0.81
MRPS28YDR337W TY1B-GR2Q12269 1755 aa9.98□□□□□ -0.81
MRPS28YDR337W TY1B-OLQ12273 1755 aa9.98□□□□□ -0.81
MRPS28YDR337W TY1B-PLQ12414 1755 aaKnown RBP9.98□□□□□ -0.81
MRPS28YDR337W MET10P39692 1035 aa9.95□□□□□ -0.82
MRPS28YDR337W MET5P47169 1442 aa9.94□□□□□ -0.82
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms