RNA–Protein interactions for RNA: YDL078C

MDH3, Transcript of Peroxisomal malate dehydrogenase, yeastyeast

Gene MDH3, Length 1,032 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH3YDL078C KTR1P27810 393 aaKnown RBP6.75□□□□□ -1.33
MDH3YDL078C ASH1P34233 588 aa6.75□□□□□ -1.33
MDH3YDL078C CST26P38226 397 aa6.75□□□□□ -1.33
MDH3YDL078C SPR3P41901 512 aa6.75□□□□□ -1.33
MDH3YDL078C REF2P42073 533 aaPredicted RBP6.75□□□□□ -1.33
MDH3YDL078C NET1P47035 1189 aa6.75□□□□□ -1.33
MDH3YDL078C PIB2P53191 635 aa6.75□□□□□ -1.33
MDH3YDL078C MRPS35P53292 345 aa6.75□□□□□ -1.33
MDH3YDL078C DMA2P53924 522 aa6.75□□□□□ -1.33
MDH3YDL078C RMD1Q03441 430 aa6.75□□□□□ -1.33
MDH3YDL078C TAH18Q12181 623 aa6.75□□□□□ -1.33
MDH3YDL078C TUB2P02557 457 aaKnown RBP6.74□□□□□ -1.33
MDH3YDL078C RNA1P11745 407 aaKnown RBP6.74□□□□□ -1.33
MDH3YDL078C PRE8P23639 250 aa6.74□□□□□ -1.33
MDH3YDL078C PTC3P34221 468 aaKnown RBP6.74□□□□□ -1.33
MDH3YDL078C VAB2P40003 282 aa6.74□□□□□ -1.33
MDH3YDL078C LYS14P40971 790 aa6.74□□□□□ -1.33
MDH3YDL078C NKP2Q06162 153 aa6.74□□□□□ -1.33
MDH3YDL078C SUB2Q07478 446 aaKnown RBP6.74□□□□□ -1.33
MDH3YDL078C OPI1P21957 404 aa6.73□□□□□ -1.33
MDH3YDL078C RTS1P38903 757 aa6.73□□□□□ -1.33
MDH3YDL078C RRP8P38961 392 aaKnown RBP6.73□□□□□ -1.33
MDH3YDL078C SLN1P39928 1220 aaPredicted RBP6.73□□□□□ -1.33
MDH3YDL078C EAF7P53911 425 aaKnown RBP6.73□□□□□ -1.33
MDH3YDL078C PKH3Q03306 898 aaPredicted RBP6.73□□□□□ -1.33
MDH3YDL078C SGD1Q06132 899 aa6.73□□□□□ -1.33
MDH3YDL078C ERG12P07277 443 aa6.72□□□□□ -1.33
MDH3YDL078C SRM1P21827 482 aa6.72□□□□□ -1.33
MDH3YDL078C IME2P32581 645 aa6.72□□□□□ -1.33
MDH3YDL078C MCD4P36051 919 aa6.72□□□□□ -1.33
MDH3YDL078C ERG7P38604 731 aa6.72□□□□□ -1.33
MDH3YDL078C STM1P39015 273 aaKnown RBP6.72□□□□□ -1.33
MDH3YDL078C YLR225CQ05948 407 aaKnown RBP6.72□□□□□ -1.33
MDH3YDL078C LAP2Q10740 671 aa6.72□□□□□ -1.33
MDH3YDL078C CFT2Q12102 859 aaPredicted RBP6.72□□□□□ -1.33
MDH3YDL078C MAM3Q12296 706 aa6.72□□□□□ -1.33
MDH3YDL078C FBP1P09201 348 aa6.71□□□□□ -1.34
MDH3YDL078C COQ1P18900 473 aa6.71□□□□□ -1.34
MDH3YDL078C SDH2P21801 266 aa6.71□□□□□ -1.34
MDH3YDL078C YDJ1P25491 409 aaKnown RBP6.71□□□□□ -1.34
MDH3YDL078C MET1P36150 593 aa6.71□□□□□ -1.34
MDH3YDL078C ENV11P53246 860 aa6.71□□□□□ -1.34
MDH3YDL078C MRD1Q06106 887 aaKnown RBP6.71□□□□□ -1.34
MDH3YDL078C FPR4Q06205 392 aaPredicted RBP6.71□□□□□ -1.34
MDH3YDL078C PLP2Q12017 286 aa6.71□□□□□ -1.34
MDH3YDL078C RAD61Q99359 647 aa6.71□□□□□ -1.34
MDH3YDL078C LAM4P38800 1345 aa6.71□□□□□ -1.34
MDH3YDL078C PER1P25625 357 aa6.7□□□□□ -1.34
MDH3YDL078C IXR1P33417 597 aa6.7□□□□□ -1.34
MDH3YDL078C SAP30P38429 201 aa6.7□□□□□ -1.34
MDH3YDL078C TIF4631P39935 952 aaKnown RBP6.7□□□□□ -1.34
MDH3YDL078C VID27P40157 782 aa6.7□□□□□ -1.34
MDH3YDL078C YNR021WP53723 404 aaKnown RBP6.7□□□□□ -1.34
MDH3YDL078C SKG3Q06315 1026 aa6.7□□□□□ -1.34
MDH3YDL078C TY3A-GQ12173 290 aa6.7□□□□□ -1.34
MDH3YDL078C TY3A-IQ99219 290 aa6.7□□□□□ -1.34
MDH3YDL078C RAD50P12753 1312 aa6.7□□□□□ -1.34
MDH3YDL078C VAS1P07806 1104 aaKnown RBP6.69□□□□□ -1.34
MDH3YDL078C CDC60P26637 1090 aaKnown RBP6.69□□□□□ -1.34
MDH3YDL078C YHL050CP38721 697 aa6.69□□□□□ -1.34
MDH3YDL078C YJL007CP47080 104 aa6.69□□□□□ -1.34
MDH3YDL078C ATG1P53104 897 aa6.69□□□□□ -1.34
MDH3YDL078C RIM20Q12033 661 aa6.69□□□□□ -1.34
MDH3YDL078C SSF2Q12153 453 aaPredicted RBP6.69□□□□□ -1.34
MDH3YDL078C SPT2P06843 333 aaPredicted RBP6.68□□□□□ -1.34
MDH3YDL078C KRS1P15180 591 aaKnown RBP6.68□□□□□ -1.34
MDH3YDL078C DIT2P21595 489 aa6.68□□□□□ -1.34
MDH3YDL078C PES4P39684 611 aa6.68□□□□□ -1.34
MDH3YDL078C VPS8P39702 1274 aa6.68□□□□□ -1.34
MDH3YDL078C RPS15Q01855 142 aaKnown RBP6.68□□□□□ -1.34
MDH3YDL078C CHO2P05374 869 aaKnown RBP6.67□□□□□ -1.34
MDH3YDL078C DAN4P47179 1161 aa6.67□□□□□ -1.34
MDH3YDL078C SOL4P53315 255 aa6.67□□□□□ -1.34
MDH3YDL078C YAF9P53930 226 aa6.67□□□□□ -1.34
MDH3YDL078C UFD2P54860 961 aa6.67□□□□□ -1.34
MDH3YDL078C YML037CQ03703 340 aa6.67□□□□□ -1.34
MDH3YDL078C UBX5Q06682 500 aa6.67□□□□□ -1.34
MDH3YDL078C HTA1P04911 132 aaKnown RBP6.66□□□□□ -1.34
MDH3YDL078C HTA2P04912 132 aa6.66□□□□□ -1.34
MDH3YDL078C SRS2P12954 1174 aa6.66□□□□□ -1.34
MDH3YDL078C VMA2P16140 517 aaKnown RBP6.66□□□□□ -1.34
MDH3YDL078C TPM1P17536 199 aaKnown RBP6.66□□□□□ -1.34
MDH3YDL078C CHS3P29465 1165 aa6.66□□□□□ -1.34
MDH3YDL078C SKI2P35207 1287 aaKnown RBP RIP-Chip data6.66□□□□□ -1.34not detected
MDH3YDL078C DCW1P36091 449 aa6.66□□□□□ -1.34
MDH3YDL078C AAP1P37898 856 aaKnown RBP6.66□□□□□ -1.34
MDH3YDL078C PSF2P40359 213 aa6.66□□□□□ -1.34
MDH3YDL078C SPN1Q06505 410 aaPredicted RBP6.66□□□□□ -1.34
MDH3YDL078C TUS1Q06412 1307 aa6.66□□□□□ -1.34
MDH3YDL078C PKC1P24583 1151 aa6.65□□□□□ -1.34
MDH3YDL078C CRG1P38892 291 aaRIP-Chip data6.65□□□□□ -1.34not detected
MDH3YDL078C GPB2P39717 880 aa6.65□□□□□ -1.34
MDH3YDL078C YDL129WQ07555 291 aa6.65□□□□□ -1.34
MDH3YDL078C COX6P00427 148 aa6.64□□□□□ -1.35
MDH3YDL078C RIT1P23796 513 aa6.64□□□□□ -1.35
MDH3YDL078C EUG1P32474 517 aa6.64□□□□□ -1.35
MDH3YDL078C ANP1P32629 500 aa6.64□□□□□ -1.35
MDH3YDL078C MYO3P36006 1272 aa6.64□□□□□ -1.35
MDH3YDL078C YKR018CP36114 725 aa6.64□□□□□ -1.35
MDH3YDL078C NUP42P49686 430 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 54.3 ms